LmjF.06.0340 | serine peptidase, clan SC, family S9A-like protein

_IDPredictionOTHERSPmTPCS_Position
LmjF.06.0340OTHER0.5416610.0030500.455289
No Results

  • Fasta :-

    >LmjF.06.0340 MAALFPWVPTSNLGYSLSRRAVNKWCPQLRTSYPLPMLDGPLPTEKPEGLELHGETQKPD PFRYMEDLFDRNTQEYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKG EERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELINPLFLQQHFGYKDCSIGICR VSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPA SFPAIPTPLKSFFKEGKPLEIAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFERIQHIRVIKCDGGLDAAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITSSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKHCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRSPFLDII NTMIDSNLPLSIAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDL EGPGKMLNDMDVMTHMHNLTVTGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RAVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVRSGAKVGGFGRATGRNLYQEE QRGKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/602 Sequence name : 602 Sequence length : 905 VALUES OF COMPUTED PARAMETERS Coef20 : 4.412 CoefTot : -0.357 ChDiff : -16 ZoneTo : 38 KR : 4 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.806 1.794 0.388 0.639 MesoH : 0.012 0.662 -0.167 0.301 MuHd_075 : 38.078 24.321 11.266 8.536 MuHd_095 : 41.146 26.245 11.752 9.607 MuHd_100 : 36.490 19.531 8.346 8.891 MuHd_105 : 36.995 20.524 8.926 8.161 Hmax_075 : 10.600 16.683 3.363 3.560 Hmax_095 : 14.088 13.387 2.805 5.364 Hmax_100 : 9.800 6.700 1.651 4.190 Hmax_105 : -1.800 4.550 2.560 3.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0429 0.9571 DFMC : 0.0502 0.9498 This protein is probably imported in mitochondria. f(Ser) = 0.1053 f(Arg) = 0.0789 CMi = 0.58309 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 905 LmjF.06.0340 MAALFPWVPTSNLGYSLSRRAVNKWCPQLRTSYPLPMLDGPLPTEKPEGLELHGETQKPDPFRYMEDLFDRNTQEYTKKE 80 MQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKGEERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELI 160 NPLFLQQHFGYKDCSIGICRVSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL 240 NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPASFPAIPTPLKSFFKEGKPLE 320 IAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALAYGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFER 400 IQHIRVIKCDGGLDAAAQTPRSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITSSQARLCAS 480 EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNTPKHCLIYVYGSYGEVPSMHF 560 QLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIKSIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMN 640 MRGCGLFGNVLMRSPFLDIINTMIDSNLPLSIAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV 720 PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDLEGPGKMLNDMDVMTHMHNLT 800 VTGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNFRAVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVR 880 SGAKVGGFGRATGRNLYQEEQRGKP 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..................P............................................................. 800 ................................................................................ 880 ......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.06.0340 19 LGYSLSR|RA 0.072 . LmjF.06.0340 20 GYSLSRR|AV 0.339 . LmjF.06.0340 24 SRRAVNK|WC 0.090 . LmjF.06.0340 30 KWCPQLR|TS 0.089 . LmjF.06.0340 46 GPLPTEK|PE 0.072 . LmjF.06.0340 58 LHGETQK|PD 0.055 . LmjF.06.0340 63 QKPDPFR|YM 0.131 . LmjF.06.0340 71 MEDLFDR|NT 0.083 . LmjF.06.0340 78 NTQEYTK|KE 0.059 . LmjF.06.0340 79 TQEYTKK|EM 0.085 . LmjF.06.0340 90 FSLISSK|FD 0.066 . LmjF.06.0340 94 SSKFDFR|HS 0.094 . LmjF.06.0340 97 FDFRHSK|GR 0.138 . LmjF.06.0340 99 FRHSKGR|LW 0.106 . LmjF.06.0340 107 WAELDAK|VV 0.069 . LmjF.06.0340 113 KVVVSSR|EG 0.082 . LmjF.06.0340 119 REGGYDK|GE 0.072 . LmjF.06.0340 123 YDKGEER|IG 0.083 . LmjF.06.0340 132 DYVYFTR|VV 0.092 . LmjF.06.0340 146 NAIGFYR|KR 0.088 . LmjF.06.0340 147 AIGFYRK|RF 0.086 . LmjF.06.0340 148 IGFYRKR|FG 0.173 . LmjF.06.0340 172 QQHFGYK|DC 0.086 . LmjF.06.0340 180 CSIGICR|VS 0.095 . LmjF.06.0340 186 RVSEDGR|YL 0.117 . LmjF.06.0340 199 SVEGGDR|YL 0.089 . LmjF.06.0340 205 RYLCHIR|SV 0.188 . LmjF.06.0340 217 TLFHVIR|GT 0.110 . LmjF.06.0340 242 ESNELNR|PH 0.085 . LmjF.06.0340 245 ELNRPHR|VM 0.317 . LmjF.06.0340 252 VMMQEIR|PG 0.079 . LmjF.06.0340 264 PPVEIYR|DD 0.115 . LmjF.06.0340 275 QFFVDVR|KT 0.072 . LmjF.06.0340 276 FFVDVRK|TK 0.088 . LmjF.06.0340 278 VDVRKTK|DN 0.180 . LmjF.06.0340 281 RKTKDNK|YV 0.076 . LmjF.06.0340 290 TITSDSK|VN 0.058 . LmjF.06.0340 310 AIPTPLK|SF 0.073 . LmjF.06.0340 314 PLKSFFK|EG 0.065 . LmjF.06.0340 317 SFFKEGK|PL 0.085 . LmjF.06.0340 324 PLEIAGK|SG 0.083 . LmjF.06.0340 344 VMVTSDK|GP 0.059 . LmjF.06.0340 349 DKGPNYR|VV 0.099 . LmjF.06.0340 354 YRVVYIR|DE 0.102 . LmjF.06.0340 363 VALAYGK|EA 0.065 . LmjF.06.0340 368 GKEAEWK|EL 0.073 . LmjF.06.0340 374 KELVPHR|DN 0.116 . LmjF.06.0340 388 VDLFHGR|II 0.082 . LmjF.06.0340 400 SHFAFER|IQ 0.079 . LmjF.06.0340 405 ERIQHIR|VI 0.100 . LmjF.06.0340 408 QHIRVIK|CD 0.146 . LmjF.06.0340 421 AAAQTPR|SE 0.175 . LmjF.06.0340 441 VTPGLNK|NF 0.058 . LmjF.06.0340 444 GLNKNFR|QK 0.113 . LmjF.06.0340 446 NKNFRQK|AM 0.081 . LmjF.06.0340 460 SLIQPPR|DC 0.104 . LmjF.06.0340 476 ITSSQAR|LC 0.091 . LmjF.06.0340 487 EALFTQR|QS 0.096 . LmjF.06.0340 505 WPYSIYR|DV 0.226 . LmjF.06.0340 523 PITICQR|RD 0.071 . LmjF.06.0340 524 ITICQRR|DA 0.398 . LmjF.06.0340 542 AQPNTPK|HC 0.060 . LmjF.06.0340 570 PYMWMLR|RR 0.071 . LmjF.06.0340 571 YMWMLRR|RW 0.139 . LmjF.06.0340 572 MWMLRRR|WT 0.171 . LmjF.06.0340 581 VAFAHVR|GG 0.103 . LmjF.06.0340 594 NWAQLGK|GE 0.067 . LmjF.06.0340 598 LGKGENK|IK 0.066 . LmjF.06.0340 600 KGENKIK|SI 0.103 . LmjF.06.0340 619 VDMGYTK|PE 0.058 . LmjF.06.0340 642 AAAMNMR|GC 0.115 . LmjF.06.0340 653 FGNVLMR|SP 0.106 . LmjF.06.0340 675 PLSIAER|ED 0.081 . LmjF.06.0340 685 GDPLNNK|RD 0.057 . LmjF.06.0340 686 DPLNNKR|DL 0.166 . LmjF.06.0340 692 RDLDLLK|QY 0.064 . LmjF.06.0340 703 YYNLNDR|VT 0.093 . LmjF.06.0340 719 ACLDDDR|VP 0.062 . LmjF.06.0340 727 PAWNALK|YV 0.076 . LmjF.06.0340 731 ALKYVAK|LR 0.065 . LmjF.06.0340 733 KYVAKLR|QQ 0.083 . LmjF.06.0340 736 AKLRQQR|TR 0.203 . LmjF.06.0340 738 LRQQRTR|KD 0.101 . LmjF.06.0340 739 RQQRTRK|DV 0.629 *ProP* LmjF.06.0340 746 DVDPVAR|PL 0.075 . LmjF.06.0340 751 ARPLVLR|MR 0.098 . LmjF.06.0340 753 PLVLRMR|PS 0.105 . LmjF.06.0340 785 DLEGPGK|ML 0.071 . LmjF.06.0340 812 DHDDQQK|VF 0.058 . LmjF.06.0340 816 QQKVFLK|WD 0.066 . LmjF.06.0340 822 KWDNWER|ER 0.073 . LmjF.06.0340 824 DNWERER|ID 0.076 . LmjF.06.0340 830 RIDYHVK|LN 0.059 . LmjF.06.0340 841 NWEPNFR|AV 0.103 . LmjF.06.0340 844 PNFRAVK|AR 0.106 . LmjF.06.0340 846 FRAVKAR|KE 0.105 . LmjF.06.0340 847 RAVKARK|EP 0.082 . LmjF.06.0340 862 DSELDQK|KV 0.082 . LmjF.06.0340 863 SELDQKK|VD 0.088 . LmjF.06.0340 869 KVDEIFR|AK 0.079 . LmjF.06.0340 871 DEIFRAK|ER 0.063 . LmjF.06.0340 873 IFRAKER|DA 0.167 . LmjF.06.0340 876 AKERDAR|ES 0.237 . LmjF.06.0340 880 DARESVR|SG 0.143 . LmjF.06.0340 884 SVRSGAK|VG 0.067 . LmjF.06.0340 890 KVGGFGR|AT 0.136 . LmjF.06.0340 894 FGRATGR|NL 0.107 . LmjF.06.0340 902 LYQEEQR|GK 0.085 . LmjF.06.0340 904 QEEQRGK|P- 0.065 . ____________________________^_________________

  • Fasta :-

    >LmjF.06.0340 ATGGCTGCACTTTTTCCGTGGGTGCCGACGTCGAATCTGGGCTACTCTTTATCGCGTAGG GCGGTGAACAAATGGTGCCCACAACTCCGCACTTCGTATCCGCTTCCTATGCTGGACGGA CCGCTCCCCACCGAGAAGCCTGAGGGTCTCGAGCTGCATGGAGAGACCCAGAAACCGGAC CCGTTCCGCTACATGGAAGACTTGTTCGACCGGAACACTCAAGAATATACGAAAAAGGAG ATGCAGCACTTTTCCCTGATTAGCAGCAAGTTTGACTTTCGACATTCCAAGGGTCGTTTG TGGGCGGAGCTTGATGCCAAGGTGGTGGTGAGCAGTCGTGAGGGCGGATACGACAAGGGC GAGGAGCGCATCGGTGATTACGTGTACTTTACCCGTGTCGTACCCGGGCACGACTCGAAT GCGATAGGGTTTTACCGGAAGCGATTTGGGGAAGTTGATCTCCTGGCCGAGGAACTCATC AACCCTCTCTTCCTTCAGCAACACTTCGGCTACAAGGACTGTTCCATTGGTATCTGCCGC GTCTCAGAAGACGGCCGCTACCTCGCATACACCCTTTCGGTGGAGGGTGGCGACAGGTAC TTGTGCCACATTCGCAGTGTTGACAACGCCACTCTGTTTCACGTGATTCGCGGGACAAAC ATCGTGAGCATCGAGTTTGGCTCCGGCAACCAGTTTTTCTACACCGAGTCGAACGAGTTG AACCGGCCTCACCGCGTCATGATGCAGGAAATAAGACCCGGCATATTAGAGCCACCGGTG GAGATTTACCGTGACGACGACGAGCAGTTTTTCGTGGATGTGCGCAAGACGAAAGATAAC AAGTACGTCACGATAACGTCGGACTCGAAGGTGAACTGCAACGCGCTAGTCGTGCCCGCG TCCTTCCCTGCAATTCCGACCCCTCTCAAATCCTTCTTCAAGGAGGGCAAGCCGCTCGAG ATTGCAGGGAAGTCAGGATGGAACTGGCTGGATCACTACAACGGCAACTTTGTCATGGTG ACATCCGACAAGGGGCCGAACTACCGTGTGGTGTACATTCGCGACGAGGTGGCGCTGGCT TATGGGAAGGAGGCAGAGTGGAAAGAGCTTGTGCCGCACCGCGACAACGTGCAAATCGAT GACGTCGATCTGTTCCACGGTCGCATCATTCTTCACGAGTCGCACTTCGCCTTCGAGCGC ATTCAGCACATCCGCGTCATCAAGTGCGACGGCGGCCTCGACGCCGCTGCGCAGACGCCA CGGAGCGAGGACGTGGTGTTGCACTTTCCCCCGCTAAGCACGGTGACCCCAGGCCTGAAC AAGAACTTTAGGCAGAAGGCAATGAGCTTCGTCTACAGCAGCCTGATTCAGCCGCCGCGC GACTGCGTCTTCAACTTCGACTCGGACATAACGTCTAGCCAGGCGAGGCTGTGCGCGTCT GAGGCGCTCTTCACACAACGCCAGTCGGAGCACTTCACGCCGTGGGATTACATGTGGCCC TACAGCATCTACCGCGATGTCTGCGTCTCGGAAGACGGGACGGAGATCCCAATCACGATA TGCCAGCGCCGTGACGCGTTCATTCAGGAAGCGACGGACTTTGAGGCGCAGCCCAACACG CCCAAGCACTGCCTCATCTACGTGTACGGCTCCTACGGCGAAGTTCCGTCGATGCACTTC CAGCTGGCCCCGTACATGTGGATGCTGCGACGACGTTGGACCGTTGCCTTCGCGCACGTC CGCGGCGGCGGCGAGCTGCCCAACTGGGCACAGCTGGGGAAGGGAGAGAACAAAATCAAG TCTATCCAGGATTTTATTGCGTGCTGCGAGCACATGGTGGACATGGGCTACACAAAGCCG GAGCTGATGGTGGCTGCGGGGGCCAGCGCCGGCTGTGTACCGATTGCGGCAGCCATGAAC ATGCGCGGGTGTGGGCTGTTCGGCAATGTACTAATGCGGTCGCCGTTCCTGGATATCATC AACACCATGATAGATTCTAACCTCCCGCTTTCAATCGCCGAGCGCGAGGACTGGGGTGAC CCGCTCAACAACAAGAGAGACCTGGACTTGCTCAAGCAGTACGACCCGTACTACAACTTG AACGACCGTGTGACGTACCCTGGAATGATGATATCGGCCTGCCTCGATGACGACCGTGTT CCGGCTTGGAACGCGCTCAAGTACGTGGCAAAACTGCGGCAGCAGCGCACCCGCAAGGAC GTGGACCCGGTTGCTCGCCCTCTGGTGCTGCGCATGCGGCCAAGCGGCGGCCACTACTTC TGGGGCGATACAGAGAACATCTGCGAGGAGCTTGCGTTTCTGTGTTCGCAGTTGGACCTT GAGGGTCCTGGCAAGATGCTTAACGACATGGATGTCATGACCCACATGCATAACCTTACC GTCACCGGTGCCATGGATCACGACGACCAGCAAAAGGTGTTCCTGAAATGGGATAACTGG GAGAGGGAGCGCATCGACTACCACGTGAAGCTGAACTCCTTCAATTGGGAGCCGAACTTC CGCGCGGTGAAGGCTCGGAAGGAGCCGTTCTTCTGGGTGCCGACGGACTCGGAGCTTGAT CAGAAAAAGGTGGACGAAATTTTTCGTGCAAAGGAACGCGACGCCCGAGAGAGCGTTCGC TCTGGGGCGAAGGTGGGGGGCTTTGGCAGGGCAACCGGTCGCAACCTCTATCAAGAGGAG CAACGCGGGAAGCCGTAG
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  • Fasta :-

    MAALFPWVPTSNLGYSLSRRAVNKWCPQLRTSYPLPMLDGPLPTEKPEGLELHGETQKPD PFRYMEDLFDRNTQEYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKG EERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELINPLFLQQHFGYKDCSIGICR VSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPA SFPAIPTPLKSFFKEGKPLEIAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFERIQHIRVIKCDGGLDAAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITSSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKHCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRSPFLDII NTMIDSNLPLSIAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDL EGPGKMLNDMDVMTHMHNLTVTGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RAVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVRSGAKVGGFGRATGRNLYQEE QRGKP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.06.0340878 SDARESVRSG0.997unspLmjF.06.0340878 SDARESVRSG0.997unspLmjF.06.0340878 SDARESVRSG0.997unspLmjF.06.0340111 SKVVVSSREG0.994unspLmjF.06.0340419 TAAAQTPRSE0.993unsp

LmjF.06.0340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India