LmjF.08.1030 | cathepsin L-like protease

_IDPredictionOTHERSPmTPCS_Position
LmjF.08.1030SP0.0008310.9971720.001997CS pos: 27-28. ARA-IY. Pr: 0.7281
No Results

  • Fasta :-

    >LmjF.08.1030 MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYQRAYGTLTEEQQRLA NFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAVKQHAGQHYRKAR ADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVS CDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDG YVSMESSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGE VPYWVIKNSWGEDWGEKGYVRVTMGVNACLLTGYPVSVHVSQSPTPGPNTTTTTHAPKRV TVKQITCTDYFCRKGCKTTVIPTKECLPNGAGGSFQMECGDHQVLKLTYTSMNCTGEAKY TVTREGKCGISWSGSSKSICQYV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/59 Sequence name : 59 Sequence length : 443 VALUES OF COMPUTED PARAMETERS Coef20 : 5.343 CoefTot : 1.809 ChDiff : 3 ZoneTo : 38 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.106 2.865 0.714 0.759 MesoH : -0.040 0.346 -0.275 0.290 MuHd_075 : 16.737 12.369 3.434 4.906 MuHd_095 : 15.813 9.876 4.080 5.214 MuHd_100 : 15.970 10.675 3.059 5.048 MuHd_105 : 18.970 11.540 4.334 5.041 Hmax_075 : 15.200 22.800 7.350 5.780 Hmax_095 : 14.175 20.300 6.211 6.388 Hmax_100 : 14.100 19.100 6.567 6.200 Hmax_105 : 13.100 15.983 5.757 5.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8304 0.1696 DFMC : 0.8789 0.1211
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 443 LmjF.08.1030 MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHAR 80 FGITKFFDLSEAEFAARYLNGAAYFAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIE 160 SQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDG 240 YVSMESSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYV 320 RVTMGVNACLLTGYPVSVHVSQSPTPGPNTTTTTHAPKRVTVKQITCTDYFCRKGCKTTVIPTKECLPNGAGGSFQMECG 400 DHQVLKLTYTSMNCTGEAKYTVTREGKCGISWSGSSKSICQYV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.08.1030 5 --MATSR|AA 0.098 . LmjF.08.1030 26 AACAPAR|AI 0.119 . LmjF.08.1030 42 ALFEEFK|RT 0.062 . LmjF.08.1030 43 LFEEFKR|TY 0.156 . LmjF.08.1030 47 FKRTYQR|AY 0.124 . LmjF.08.1030 58 LTEEQQR|LA 0.085 . LmjF.08.1030 64 RLANFER|NL 0.115 . LmjF.08.1030 70 RNLELMR|EH 0.074 . LmjF.08.1030 75 MREHQAR|NP 0.152 . LmjF.08.1030 80 ARNPHAR|FG 0.247 . LmjF.08.1030 85 ARFGITK|FF 0.086 . LmjF.08.1030 97 EAEFAAR|YL 0.095 . LmjF.08.1030 109 AYFAAVK|QH 0.053 . LmjF.08.1030 117 HAGQHYR|KA 0.134 . LmjF.08.1030 118 AGQHYRK|AR 0.074 . LmjF.08.1030 120 QHYRKAR|AD 0.336 . LmjF.08.1030 133 PDAVDWR|EK 0.136 . LmjF.08.1030 135 AVDWREK|GA 0.064 . LmjF.08.1030 142 GAVTPVK|NQ 0.081 . LmjF.08.1030 169 WAVAGHK|LV 0.074 . LmjF.08.1030 172 AGHKLVR|LS 0.123 . LmjF.08.1030 202 AFEWVLR|NM 0.083 . LmjF.08.1030 212 GTVFTEK|SY 0.071 . LmjF.08.1030 237 ELAPGAR|ID 0.099 . LmjF.08.1030 249 SMESSER|VM 0.072 . LmjF.08.1030 257 MAAWLAK|NG 0.064 . LmjF.08.1030 307 VPYWVIK|NS 0.067 . LmjF.08.1030 317 GEDWGEK|GY 0.063 . LmjF.08.1030 321 GEKGYVR|VT 0.090 . LmjF.08.1030 358 TTTHAPK|RV 0.082 . LmjF.08.1030 359 TTHAPKR|VT 0.286 . LmjF.08.1030 363 PKRVTVK|QI 0.068 . LmjF.08.1030 373 CTDYFCR|KG 0.077 . LmjF.08.1030 374 TDYFCRK|GC 0.080 . LmjF.08.1030 377 FCRKGCK|TT 0.057 . LmjF.08.1030 384 TTVIPTK|EC 0.069 . LmjF.08.1030 406 GDHQVLK|LT 0.080 . LmjF.08.1030 419 NCTGEAK|YT 0.065 . LmjF.08.1030 424 AKYTVTR|EG 0.090 . LmjF.08.1030 427 TVTREGK|CG 0.095 . LmjF.08.1030 437 SWSGSSK|SI 0.135 . ____________________________^_________________

  • Fasta :-

    >LmjF.08.1030 ATGGCGACGTCGAGGGCCGCTCTCTGCGCTGTTGCGGTTGTGTGCGTGGTGCTTGCGGCT GCCTGCGCGCCCGCGCGCGCGATATACGTGGGCACGCCGGCTGCTGCGCTGTTCGAGGAG TTCAAGCGGACGTACCAGCGCGCGTACGGGACGCTGACCGAGGAGCAGCAGCGGCTGGCG AACTTCGAGCGCAACCTGGAGCTGATGCGCGAGCATCAGGCGAGGAACCCACACGCGAGG TTCGGGATCACGAAGTTCTTTGACCTGTCGGAGGCGGAGTTCGCCGCGCGCTACCTGAAC GGCGCCGCGTACTTCGCAGCGGTGAAGCAGCACGCCGGCCAGCACTACCGCAAGGCGCGC GCGGACCTGTCGGCGGTGCCTGATGCGGTGGACTGGCGCGAGAAGGGCGCCGTGACGCCG GTGAAGAATCAGGGTGCGTGCGGGTCGTGCTGGGCGTTCTCGGCGGTCGGCAACATCGAG TCGCAGTGGGCCGTTGCCGGCCACAAGCTGGTGAGGCTGTCGGAGCAGCAGCTGGTGAGC TGCGATCACGTGGACAATGGTTGCGGCGGCGGGCTGATGCTGCAGGCATTCGAGTGGGTG CTGCGAAACATGAACGGGACCGTGTTCACGGAGAAGAGCTACCCCTACGTCTCCGGCAAC GGTGATGTGCCCGAGTGCTCGAACAGCAGTGAACTCGCTCCCGGTGCGCGAATCGACGGG TACGTGTCGATGGAAAGCAGCGAAAGAGTTATGGCTGCGTGGCTTGCGAAGAATGGCCCC ATCTCGATTGCGGTCGACGCCAGCTCCTTTATGTCTTACCATAGCGGCGTCCTGACCAGC TGCATTGGTGAGCAGCTGAACCACGGCGTGCTGCTCGTTGGGTACAACATGACTGGTGAG GTTCCGTACTGGGTGATCAAGAACTCGTGGGGTGAGGACTGGGGCGAGAAGGGCTACGTG CGCGTGACCATGGGGGTGAACGCGTGCCTGCTCACTGGGTACCCCGTGTCCGTGCATGTG TCGCAGAGCCCCACCCCTGGCCCAAACACGACCACCACGACGCACGCTCCTAAACGGGTG ACGGTGAAGCAGATCACCTGCACGGATTATTTCTGCCGAAAGGGGTGCAAGACGACGGTG ATCCCCACGAAAGAGTGCCTGCCGAACGGGGCAGGCGGCTCTTTTCAGATGGAGTGCGGT GACCATCAGGTGTTGAAGCTCACCTACACCTCCATGAATTGCACTGGTGAGGCCAAGTAT ACGGTGACAAGGGAGGGTAAGTGCGGGATATCGTGGTCCGGCTCGAGCAAGAGCATTTGC CAGTACGTGTAG
  • Download Fasta

  • Fasta :-

    MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYQRAYGTLTEEQQRLA NFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAVKQHAGQHYRKAR ADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVS CDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDG YVSMESSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGE VPYWVIKNSWGEDWGEKGYVRVTMGVNACLLTGYPVSVHVSQSPTPGPNTTTTTHAPKRV TVKQITCTDYFCRKGCKTTVIPTKECLPNGAGGSFQMECGDHQVLKLTYTSMNCTGEAKY TVTREGKCGISWSGSSKSICQYV

  • title: active site
  • coordinates: Q144,C150,H288,N308
No Results
No Results
IDSitePeptideScoreMethod
LmjF.08.1030243 SDGYVSMESS0.995unsp

LmjF.08.1030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India