LmjF.12.1330 | Alpha/beta hydrolase domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.12.1330OTHER0.9641650.0033550.032481
No Results

  • Fasta :-

    >LmjF.12.1330 MVAMTSRLDAFVKSIIFPRPKIATYDTSTHPHKLVHIPLVDPHRHVENGAFTYGYLLANP KATHVLLYAHPNAVDIGMAYKELRYVSKEASMSVLLFEYSGYGLTHTPITEESIHQDTLS AYLFLRRYFGVPANRVILCGRSLGASPAAFLAAFLPPLQRPCLLILQCPFTALSECINEF SQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV TYLYQEDGKGHNNLSSATLVRILRERVVTEALLPPLLPHLKLFLANAPVYARLFCDDGGM GLATLSDAVASWFAKLSLHCCAPPLDQLYVLLTASVCAFTMECARSWQIYCALIRKNLCG DAAHKRCTKDVFLHRCLACWGSPLAVHVAVERVNSTKEVRCFGFATCRDAMLDAPAVYPA KSTEALLSVLEIGVTPGLLSCIKRCLNTAPDMLEEEEIPCFVQQDTVSAVQLECERTVAF LTKEDKQRLCALLKDMDTGFSDNLSNKAYERLRRSPSTSPQMSAESFEELKEWLRPWTST RGTDMHALAQEVPWDDYLLRSRSVARQHVLNESMSWEECCQAMEESDVVFKIYTLFQEMS AQYLRPTFHPHTTASVASRA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/710 Sequence name : 710 Sequence length : 620 VALUES OF COMPUTED PARAMETERS Coef20 : 4.602 CoefTot : -1.306 ChDiff : -5 ZoneTo : 40 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.806 0.318 0.631 MesoH : 0.321 0.869 -0.069 0.370 MuHd_075 : 22.063 19.059 7.001 5.908 MuHd_095 : 21.497 18.925 7.416 4.262 MuHd_100 : 25.906 18.138 7.006 4.558 MuHd_105 : 26.881 16.020 7.532 5.028 Hmax_075 : 11.800 19.833 3.778 5.600 Hmax_095 : 5.600 17.100 1.680 4.820 Hmax_100 : 9.000 18.800 0.543 6.230 Hmax_105 : 4.200 21.233 -2.235 5.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9799 0.0201 DFMC : 0.9714 0.0286
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 620 LmjF.12.1330 MVAMTSRLDAFVKSIIFPRPKIATYDTSTHPHKLVHIPLVDPHRHVENGAFTYGYLLANPKATHVLLYAHPNAVDIGMAY 80 KELRYVSKEASMSVLLFEYSGYGLTHTPITEESIHQDTLSAYLFLRRYFGVPANRVILCGRSLGASPAAFLAAFLPPLQR 160 PCLLILQCPFTALSECINEFSQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV 240 TYLYQEDGKGHNNLSSATLVRILRERVVTEALLPPLLPHLKLFLANAPVYARLFCDDGGMGLATLSDAVASWFAKLSLHC 320 CAPPLDQLYVLLTASVCAFTMECARSWQIYCALIRKNLCGDAAHKRCTKDVFLHRCLACWGSPLAVHVAVERVNSTKEVR 400 CFGFATCRDAMLDAPAVYPAKSTEALLSVLEIGVTPGLLSCIKRCLNTAPDMLEEEEIPCFVQQDTVSAVQLECERTVAF 480 LTKEDKQRLCALLKDMDTGFSDNLSNKAYERLRRSPSTSPQMSAESFEELKEWLRPWTSTRGTDMHALAQEVPWDDYLLR 560 SRSVARQHVLNESMSWEECCQAMEESDVVFKIYTLFQEMSAQYLRPTFHPHTTASVASRA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................P.............................................. 560 ............................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.12.1330 7 MVAMTSR|LD 0.077 . LmjF.12.1330 13 RLDAFVK|SI 0.081 . LmjF.12.1330 19 KSIIFPR|PK 0.108 . LmjF.12.1330 21 IIFPRPK|IA 0.068 . LmjF.12.1330 33 TSTHPHK|LV 0.086 . LmjF.12.1330 44 PLVDPHR|HV 0.159 . LmjF.12.1330 61 YLLANPK|AT 0.065 . LmjF.12.1330 81 DIGMAYK|EL 0.063 . LmjF.12.1330 84 MAYKELR|YV 0.216 . LmjF.12.1330 88 ELRYVSK|EA 0.083 . LmjF.12.1330 126 SAYLFLR|RY 0.099 . LmjF.12.1330 127 AYLFLRR|YF 0.109 . LmjF.12.1330 135 FGVPANR|VI 0.074 . LmjF.12.1330 141 RVILCGR|SL 0.188 . LmjF.12.1330 160 FLPPLQR|PC 0.073 . LmjF.12.1330 197 LGYNWFR|TI 0.118 . LmjF.12.1330 221 TNDTTVR|ID 0.090 . LmjF.12.1330 230 HSYTLQR|AR 0.094 . LmjF.12.1330 232 YTLQRAR|DT 0.116 . LmjF.12.1330 237 ARDTAAK|PC 0.071 . LmjF.12.1330 249 LYQEDGK|GH 0.058 . LmjF.12.1330 261 SSATLVR|IL 0.111 . LmjF.12.1330 264 TLVRILR|ER 0.150 . LmjF.12.1330 266 VRILRER|VV 0.120 . LmjF.12.1330 281 PLLPHLK|LF 0.055 . LmjF.12.1330 292 NAPVYAR|LF 0.090 . LmjF.12.1330 315 VASWFAK|LS 0.065 . LmjF.12.1330 345 FTMECAR|SW 0.120 . LmjF.12.1330 355 IYCALIR|KN 0.074 . LmjF.12.1330 356 YCALIRK|NL 0.074 . LmjF.12.1330 365 CGDAAHK|RC 0.055 . LmjF.12.1330 366 GDAAHKR|CT 0.313 . LmjF.12.1330 369 AHKRCTK|DV 0.185 . LmjF.12.1330 375 KDVFLHR|CL 0.082 . LmjF.12.1330 392 VHVAVER|VN 0.089 . LmjF.12.1330 397 ERVNSTK|EV 0.091 . LmjF.12.1330 400 NSTKEVR|CF 0.092 . LmjF.12.1330 408 FGFATCR|DA 0.095 . LmjF.12.1330 421 PAVYPAK|ST 0.103 . LmjF.12.1330 443 GLLSCIK|RC 0.053 . LmjF.12.1330 444 LLSCIKR|CL 0.337 . LmjF.12.1330 476 VQLECER|TV 0.070 . LmjF.12.1330 483 TVAFLTK|ED 0.073 . LmjF.12.1330 486 FLTKEDK|QR 0.054 . LmjF.12.1330 488 TKEDKQR|LC 0.092 . LmjF.12.1330 494 RLCALLK|DM 0.080 . LmjF.12.1330 507 SDNLSNK|AY 0.081 . LmjF.12.1330 511 SNKAYER|LR 0.070 . LmjF.12.1330 513 KAYERLR|RS 0.071 . LmjF.12.1330 514 AYERLRR|SP 0.633 *ProP* LmjF.12.1330 531 ESFEELK|EW 0.054 . LmjF.12.1330 535 ELKEWLR|PW 0.075 . LmjF.12.1330 541 RPWTSTR|GT 0.132 . LmjF.12.1330 560 WDDYLLR|SR 0.140 . LmjF.12.1330 562 DYLLRSR|SV 0.116 . LmjF.12.1330 566 RSRSVAR|QH 0.112 . LmjF.12.1330 591 ESDVVFK|IY 0.063 . LmjF.12.1330 605 MSAQYLR|PT 0.093 . LmjF.12.1330 619 TASVASR|A- 0.147 . ____________________________^_________________

  • Fasta :-

    >LmjF.12.1330 ATGGTAGCCATGACCAGCCGTCTAGACGCCTTCGTTAAATCGATCATTTTCCCTCGCCCT AAAATCGCCACCTACGACACCTCCACCCATCCCCACAAGCTCGTGCACATCCCGCTCGTC GATCCACACCGACACGTTGAAAACGGCGCCTTCACCTACGGCTACCTGCTGGCAAACCCC AAGGCCACTCATGTGCTCTTGTACGCCCACCCCAATGCCGTGGATATCGGCATGGCCTAC AAGGAGCTCCGCTACGTGAGCAAAGAGGCCTCCATGAGCGTGCTGCTGTTCGAGTACTCG GGCTACGGGCTCACCCACACCCCCATAACAGAAGAAAGCATTCACCAAGACACGCTTTCA GCCTACCTCTTCCTGCGCCGCTACTTTGGCGTGCCAGCGAACCGCGTAATCCTCTGCGGC CGCTCTCTCGGGGCCTCGCCCGCCGCATTTCTGGCTGCCTTCCTTCCACCGCTTCAGCGG CCATGCCTGCTTATTCTCCAATGCCCCTTCACCGCGCTCAGCGAGTGCATCAACGAGTTC TCGCAGAACGCCGTGTCCATCGCGAACTTTCTAGGGTACAACTGGTTTCGAACCATCGAC ATCATCACAGACGTGAGTTGCCCGGTCGTGCTTCACCACGGCACTAACGACACCACTGTG AGGATTGACCACTCCTACACTCTTCAGCGGGCCCGTGACACCGCTGCGAAACCGTGCGTC ACCTACCTGTACCAAGAGGACGGCAAAGGTCACAACAACCTCAGTTCTGCCACCCTGGTG CGCATTCTTCGAGAGCGTGTCGTCACAGAGGCTCTGCTGCCGCCGCTACTGCCCCACTTG AAGCTGTTCTTGGCAAACGCGCCCGTCTACGCGCGGCTTTTCTGCGACGATGGCGGAATG GGGCTCGCCACGCTGAGCGACGCCGTGGCATCCTGGTTCGCAAAGCTGTCCCTTCACTGT TGCGCACCGCCGCTAGATCAGCTGTACGTGCTGCTGACAGCGAGCGTCTGCGCCTTCACG ATGGAGTGCGCGCGATCGTGGCAGATTTACTGCGCGCTCATCAGGAAGAACTTGTGTGGC GACGCGGCACACAAGCGATGCACCAAGGACGTCTTTCTTCATCGGTGCCTGGCCTGCTGG GGGAGCCCCCTTGCGGTTCACGTCGCTGTCGAGCGCGTAAACTCGACGAAAGAGGTCCGC TGCTTCGGCTTCGCTACCTGCCGGGACGCAATGCTGGACGCACCCGCTGTGTACCCGGCA AAGTCCACGGAGGCGCTGCTAAGCGTGCTGGAAATCGGTGTCACGCCGGGGCTTCTGTCC TGCATAAAGCGGTGCCTTAACACCGCCCCCGACATGCTGGAAGAGGAGGAGATTCCATGC TTTGTCCAGCAAGACACGGTTAGCGCAGTGCAGCTGGAGTGTGAGCGTACCGTGGCCTTT CTGACAAAGGAAGACAAGCAGCGTCTGTGTGCTTTGCTAAAGGACATGGACACCGGCTTT AGCGACAATCTGTCCAACAAGGCGTATGAGCGGCTGCGCCGCTCACCGTCCACGTCTCCC CAAATGAGCGCAGAGTCTTTCGAAGAGCTGAAGGAGTGGCTGCGGCCGTGGACCTCCACA CGCGGAACCGACATGCATGCACTGGCGCAGGAGGTACCGTGGGACGACTATCTGCTGCGC AGTCGGTCCGTTGCTCGTCAGCACGTGCTGAATGAGAGCATGAGCTGGGAGGAGTGCTGC CAGGCAATGGAGGAGAGCGATGTGGTTTTCAAAATCTACACCCTCTTTCAGGAAATGTCA GCACAGTACCTGCGGCCTACCTTTCATCCCCACACCACGGCGTCGGTGGCGTCTCGTGCG TAA
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  • Fasta :-

    MVAMTSRLDAFVKSIIFPRPKIATYDTSTHPHKLVHIPLVDPHRHVENGAFTYGYLLANP KATHVLLYAHPNAVDIGMAYKELRYVSKEASMSVLLFEYSGYGLTHTPITEESIHQDTLS AYLFLRRYFGVPANRVILCGRSLGASPAAFLAAFLPPLQRPCLLILQCPFTALSECINEF SQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV TYLYQEDGKGHNNLSSATLVRILRERVVTEALLPPLLPHLKLFLANAPVYARLFCDDGGM GLATLSDAVASWFAKLSLHCCAPPLDQLYVLLTASVCAFTMECARSWQIYCALIRKNLCG DAAHKRCTKDVFLHRCLACWGSPLAVHVAVERVNSTKEVRCFGFATCRDAMLDAPAVYPA KSTEALLSVLEIGVTPGLLSCIKRCLNTAPDMLEEEEIPCFVQQDTVSAVQLECERTVAF LTKEDKQRLCALLKDMDTGFSDNLSNKAYERLRRSPSTSPQMSAESFEELKEWLRPWTST RGTDMHALAQEVPWDDYLLRSRSVARQHVLNESMSWEECCQAMEESDVVFKIYTLFQEMS AQYLRPTFHPHTTASVASRA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.12.1330515 SRLRRSPSTS0.996unspLmjF.12.1330515 SRLRRSPSTS0.996unspLmjF.12.1330515 SRLRRSPSTS0.996unspLmjF.12.1330519 SSPSTSPQMS0.99unspLmjF.12.1330523 SSPQMSAESF0.995unspLmjF.12.1330526 SMSAESFEEL0.995unspLmjF.12.1330575 SNESMSWEEC0.995unspLmjF.12.133087 SLRYVSKEAS0.993unspLmjF.12.1330395 SERVNSTKEV0.997unsp

LmjF.12.1330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India