LmjF.14.0180 | carboxypeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004181      

  • Computed_GO_Functions:  metallocarboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.14.0180OTHER0.9865740.0006400.012786
No Results

  • Fasta :-

    >LmjF.14.0180 MQAYEELKQLHLQLHNLRHFLALGGWDMQTMMPPKGATARANALAELEAHVRQLHTAPRV ALLLKEALLVKDELAEVDRANLREMVRLHELASQLPEELLRRKARLTTLAQQLWVKCRAE NDVAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGANEPGMTVAKLDAIYADIKSWL PALYKEVLENQKDVDASLTELQTPISKEKQIALGRQLMTDVWRYDWGAGRYDEAPHPFGG MVKEDVRMTYYWSPDNYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQS LLAERMIAKSAAFAEYLTPLLKLHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLH VILRYEIERDLIEGSLEAVDVPRVWNEKMKEYMGLETLGRDDLGCLQDIHWAAGYWAGFP AYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK ATGEPLNPRHLREHLERRYLRKED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/53 Sequence name : 53 Sequence length : 504 VALUES OF COMPUTED PARAMETERS Coef20 : 3.291 CoefTot : -0.171 ChDiff : -13 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.300 0.168 0.632 MesoH : -0.487 0.357 -0.329 0.264 MuHd_075 : 9.278 5.712 1.381 2.620 MuHd_095 : 7.675 9.822 3.302 1.694 MuHd_100 : 16.501 17.498 6.881 4.025 MuHd_105 : 29.126 23.376 10.023 6.560 Hmax_075 : -1.900 3.000 -3.855 1.890 Hmax_095 : -8.300 4.812 -3.715 0.814 Hmax_100 : 0.500 10.000 -1.497 3.430 Hmax_105 : 14.117 18.317 2.769 6.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9640 0.0360 DFMC : 0.9691 0.0309
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 504 LmjF.14.0180 MQAYEELKQLHLQLHNLRHFLALGGWDMQTMMPPKGATARANALAELEAHVRQLHTAPRVALLLKEALLVKDELAEVDRA 80 NLREMVRLHELASQLPEELLRRKARLTTLAQQLWVKCRAENDVAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGAN 160 EPGMTVAKLDAIYADIKSWLPALYKEVLENQKDVDASLTELQTPISKEKQIALGRQLMTDVWRYDWGAGRYDEAPHPFGG 240 MVKEDVRMTYYWSPDNYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERMIAKSAAFAEYLTPL 320 LKLHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLHVILRYEIERDLIEGSLEAVDVPRVWNEKMKEYMGLETLGR 400 DDLGCLQDIHWAAGYWAGFPAYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK 480 ATGEPLNPRHLREHLERRYLRKED 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.14.0180 8 QAYEELK|QL 0.070 . LmjF.14.0180 18 LQLHNLR|HF 0.080 . LmjF.14.0180 35 QTMMPPK|GA 0.078 . LmjF.14.0180 40 PKGATAR|AN 0.107 . LmjF.14.0180 52 ELEAHVR|QL 0.099 . LmjF.14.0180 59 QLHTAPR|VA 0.085 . LmjF.14.0180 65 RVALLLK|EA 0.062 . LmjF.14.0180 71 KEALLVK|DE 0.062 . LmjF.14.0180 79 ELAEVDR|AN 0.082 . LmjF.14.0180 83 VDRANLR|EM 0.067 . LmjF.14.0180 87 NLREMVR|LH 0.071 . LmjF.14.0180 101 LPEELLR|RK 0.068 . LmjF.14.0180 102 PEELLRR|KA 0.100 . LmjF.14.0180 103 EELLRRK|AR 0.067 . LmjF.14.0180 105 LLRRKAR|LT 0.401 . LmjF.14.0180 116 AQQLWVK|CR 0.057 . LmjF.14.0180 118 QLWVKCR|AE 0.121 . LmjF.14.0180 138 ELVDLER|EE 0.077 . LmjF.14.0180 142 LEREEGR|LR 0.071 . LmjF.14.0180 144 REEGRLR|AG 0.071 . LmjF.14.0180 150 RAGTSGK|SP 0.101 . LmjF.14.0180 168 PGMTVAK|LD 0.060 . LmjF.14.0180 177 AIYADIK|SW 0.075 . LmjF.14.0180 185 WLPALYK|EV 0.068 . LmjF.14.0180 192 EVLENQK|DV 0.086 . LmjF.14.0180 207 LQTPISK|EK 0.058 . LmjF.14.0180 209 TPISKEK|QI 0.079 . LmjF.14.0180 215 KQIALGR|QL 0.084 . LmjF.14.0180 223 LMTDVWR|YD 0.098 . LmjF.14.0180 230 YDWGAGR|YD 0.087 . LmjF.14.0180 243 PFGGMVK|ED 0.054 . LmjF.14.0180 247 MVKEDVR|MT 0.076 . LmjF.14.0180 259 SPDNYTK|CL 0.067 . LmjF.14.0180 272 HETGHAK|YE 0.069 . LmjF.14.0180 280 EQNCGPR|EL 0.092 . LmjF.14.0180 291 QPVCEAR|SG 0.233 . LmjF.14.0180 305 QSLLAER|MI 0.087 . LmjF.14.0180 309 AERMIAK|SA 0.102 . LmjF.14.0180 322 YLTPLLK|LH 0.057 . LmjF.14.0180 337 LTVENVR|KI 0.085 . LmjF.14.0180 338 TVENVRK|IN 0.088 . LmjF.14.0180 344 KINQLVK|PS 0.061 . LmjF.14.0180 349 VKPSYIR|TL 0.080 . LmjF.14.0180 364 SLHVILR|YE 0.086 . LmjF.14.0180 369 LRYEIER|DL 0.110 . LmjF.14.0180 383 EAVDVPR|VW 0.093 . LmjF.14.0180 388 PRVWNEK|MK 0.068 . LmjF.14.0180 390 VWNEKMK|EY 0.081 . LmjF.14.0180 400 GLETLGR|DD 0.105 . LmjF.14.0180 437 QLMAAIR|QQ 0.076 . LmjF.14.0180 450 VVTQCIR|TG 0.064 . LmjF.14.0180 460 IDPILAK|QK 0.067 . LmjF.14.0180 462 PILAKQK|EM 0.063 . LmjF.14.0180 480 TDELLIK|AT 0.066 . LmjF.14.0180 489 GEPLNPR|HL 0.090 . LmjF.14.0180 492 LNPRHLR|EH 0.176 . LmjF.14.0180 497 LREHLER|RY 0.111 . LmjF.14.0180 498 REHLERR|YL 0.212 . LmjF.14.0180 501 LERRYLR|KE 0.243 . LmjF.14.0180 502 ERRYLRK|ED 0.101 . ____________________________^_________________

  • Fasta :-

    >LmjF.14.0180 ATGCAGGCGTACGAGGAGCTGAAGCAGCTGCATCTACAGCTGCACAACCTGCGGCACTTT CTTGCCCTAGGTGGGTGGGACATGCAGACCATGATGCCGCCGAAGGGCGCGACGGCCCGC GCGAACGCGCTTGCGGAGCTGGAGGCGCACGTGCGCCAGCTTCACACAGCGCCACGCGTT GCGCTCCTGTTGAAGGAGGCGCTGCTGGTTAAGGACGAACTCGCCGAGGTGGACCGCGCG AACCTCCGCGAAATGGTGCGTCTGCACGAACTTGCGTCGCAGCTGCCGGAGGAGCTGCTG CGGCGCAAGGCGCGGCTGACAACGCTGGCACAGCAGCTGTGGGTGAAATGCCGCGCGGAA AACGACGTTGCTGCGTGGCTGCCGACGCTGCAGGAGCTGGTGGACCTCGAGCGCGAGGAG GGCCGCCTTCGAGCCGGCACGAGCGGGAAGTCCCCGTACGACGCGCTGCTCGGTGCCAAC GAGCCCGGGATGACAGTTGCGAAGCTGGACGCAATCTACGCGGACATCAAGTCGTGGCTG CCGGCGCTGTACAAGGAGGTGCTGGAGAACCAAAAGGACGTGGACGCGAGCCTCACTGAG CTGCAGACGCCGATCTCGAAGGAGAAGCAGATTGCGCTTGGCCGGCAGCTGATGACGGAC GTGTGGAGGTACGACTGGGGCGCCGGCCGCTACGACGAGGCACCGCACCCGTTTGGTGGG ATGGTGAAGGAGGACGTGCGGATGACGTACTACTGGTCGCCGGACAACTACACCAAGTGC CTCCTGGCGACGATCCACGAGACAGGACACGCCAAGTACGAGCAGAACTGCGGGCCGCGC GAGCTGCTTGGGCAGCCGGTGTGCGAGGCGCGATCCGGCGGCATCCACGAGACGCAGTCG CTGCTGGCGGAGAGGATGATAGCCAAGTCCGCTGCGTTCGCCGAGTACCTGACGCCGCTG CTGAAGCTGCACCTTGGCGCGCAGCCAGGGCTCACGGTGGAGAACGTGCGCAAGATCAAC CAGCTGGTGAAGCCAAGCTACATCCGGACGCTCGCGGACGAGGTGGGTTACTCTCTCCAC GTGATCCTGCGCTACGAGATCGAGCGCGACCTGATCGAGGGGAGCCTGGAGGCGGTGGAT GTGCCGCGGGTGTGGAACGAAAAGATGAAGGAGTACATGGGCCTGGAGACGCTTGGGCGT GACGACCTCGGTTGCCTACAGGACATCCACTGGGCTGCCGGCTACTGGGCAGGCTTTCCC GCCTACACGATCGGCGCCATCGGCGCTGCGCAACTCATGGCGGCCATCCGCCAGCAGCTG GGTGACGACGTCGTGACGCAGTGCATCCGCACGGGCCACATCGATCCCATCTTGGCCAAG CAAAAGGAGATGATCTGGGACCTGGGCTGCCTGCTCGAGACGGACGAGCTGCTTATCAAG GCAACCGGCGAGCCGCTGAACCCGCGCCACCTGCGCGAGCACCTGGAGCGCCGCTACTTG CGCAAAGAGGACTGA
  • Download Fasta

  • Fasta :-

    MQAYEELKQLHLQLHNLRHFLALGGWDMQTMMPPKGATARANALAELEAHVRQLHTAPRV ALLLKEALLVKDELAEVDRANLREMVRLHELASQLPEELLRRKARLTTLAQQLWVKCRAE NDVAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGANEPGMTVAKLDAIYADIKSWL PALYKEVLENQKDVDASLTELQTPISKEKQIALGRQLMTDVWRYDWGAGRYDEAPHPFGG MVKEDVRMTYYWSPDNYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQS LLAERMIAKSAAFAEYLTPLLKLHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLH VILRYEIERDLIEGSLEAVDVPRVWNEKMKEYMGLETLGRDDLGCLQDIHWAAGYWAGFP AYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK ATGEPLNPRHLREHLERRYLRKED

  • title: metal binding site
  • coordinates: H266,H270,E297
No Results
No Results
IDSitePeptideScoreMethod
LmjF.14.0180151 STSGKSPYDA0.998unsp

LmjF.14.0180      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India