LmjF.18.1060 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.18.1060OTHER0.9999390.0000130.000048
No Results

  • Fasta :-

    >LmjF.18.1060 MHIKRNKNWEPMTVTREQSYISVCKELNDAPLRQLQETLKYGDTRLDVSGIYLPRKHFRC VLQFIEERPDIEELILDGANIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASANIIRQLC IENSNLVSVVLRDTCIPSYLVDEIMLIVDLNRLNAESLSSTSTAGAQQKASAVARWMLFR GKNDRGFCATVKLSSSATRKVTDGFVTSYDSVFSDISFQQDAFDHPVAGMETIRWNKYYA LHSFQEAGLGNSKAPFSPSPHYNNQNLCAALNILSFYDVLYKSLVVERYPEAGLYVFRLF VGESPVEVYVDDLVPCVHLDATCTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLS DCIELLTGCTGFEVNLLSRSSFSTTFDTLRALSEYGHKLVACAIPHTSIEEQTFEESGVC CGIPYAILETDACQKNGSHYAFLIQVAAPSSGRALKYAFEYEMYKTEEVNGNRVLWMTFE DFAATFERVFLLLWPFDDAVSDHKTTVEFQVTSEFLSSSSQFAKNPSFLIQNKGKSSSPI MVSLSTSSAPDTTIGAKCLFYKAANTENGAFLRRYNVCENNASFGLEVFEGNEGSVFFNL LPTERLQMTLSSRVPSNFRIRISSVENVDAMQLPDIMASSTFSAKWNTLFKAKRFSDDIF QLNRISGGCTLSLVLALSQATDSSPPFPLGVLGWKGTSIDVVDAAKPHFSTQQERSTVCV HSFLLTLAAGESFFLLPYCCGSRCPDGYDLTVFCKESFTQSRVKTASVLRCTKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/181 Sequence name : 181 Sequence length : 774 VALUES OF COMPUTED PARAMETERS Coef20 : 3.695 CoefTot : -0.598 ChDiff : -11 ZoneTo : 9 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.518 0.282 0.619 MesoH : 0.119 0.760 -0.133 0.321 MuHd_075 : 11.184 7.006 3.314 2.921 MuHd_095 : 9.561 6.800 3.415 3.405 MuHd_100 : 6.471 5.738 1.952 2.853 MuHd_105 : 7.075 3.973 0.395 1.523 Hmax_075 : -8.900 -3.800 -6.064 0.130 Hmax_095 : -14.400 -4.500 -6.094 -0.520 Hmax_100 : -9.900 -4.900 -6.648 -0.210 Hmax_105 : -10.200 -3.383 -7.316 -0.618 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9661 0.0339 DFMC : 0.9393 0.0607
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 774 LmjF.18.1060 MHIKRNKNWEPMTVTREQSYISVCKELNDAPLRQLQETLKYGDTRLDVSGIYLPRKHFRCVLQFIEERPDIEELILDGAN 80 IGVEEVKLLKESLLRSCVSKLSLQRIKLDSASANIIRQLCIENSNLVSVVLRDTCIPSYLVDEIMLIVDLNRLNAESLSS 160 TSTAGAQQKASAVARWMLFRGKNDRGFCATVKLSSSATRKVTDGFVTSYDSVFSDISFQQDAFDHPVAGMETIRWNKYYA 240 LHSFQEAGLGNSKAPFSPSPHYNNQNLCAALNILSFYDVLYKSLVVERYPEAGLYVFRLFVGESPVEVYVDDLVPCVHLD 320 ATCTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLSDCIELLTGCTGFEVNLLSRSSFSTTFDTLRALSEYGHKLV 400 ACAIPHTSIEEQTFEESGVCCGIPYAILETDACQKNGSHYAFLIQVAAPSSGRALKYAFEYEMYKTEEVNGNRVLWMTFE 480 DFAATFERVFLLLWPFDDAVSDHKTTVEFQVTSEFLSSSSQFAKNPSFLIQNKGKSSSPIMVSLSTSSAPDTTIGAKCLF 560 YKAANTENGAFLRRYNVCENNASFGLEVFEGNEGSVFFNLLPTERLQMTLSSRVPSNFRIRISSVENVDAMQLPDIMASS 640 TFSAKWNTLFKAKRFSDDIFQLNRISGGCTLSLVLALSQATDSSPPFPLGVLGWKGTSIDVVDAAKPHFSTQQERSTVCV 720 HSFLLTLAAGESFFLLPYCCGSRCPDGYDLTVFCKESFTQSRVKTASVLRCTKT 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ...................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.18.1060 4 ---MHIK|RN 0.069 . LmjF.18.1060 5 --MHIKR|NK 0.212 . LmjF.18.1060 7 MHIKRNK|NW 0.078 . LmjF.18.1060 16 EPMTVTR|EQ 0.097 . LmjF.18.1060 25 SYISVCK|EL 0.068 . LmjF.18.1060 33 LNDAPLR|QL 0.086 . LmjF.18.1060 40 QLQETLK|YG 0.070 . LmjF.18.1060 45 LKYGDTR|LD 0.083 . LmjF.18.1060 55 SGIYLPR|KH 0.085 . LmjF.18.1060 56 GIYLPRK|HF 0.092 . LmjF.18.1060 59 LPRKHFR|CV 0.222 . LmjF.18.1060 68 LQFIEER|PD 0.077 . LmjF.18.1060 87 IGVEEVK|LL 0.062 . LmjF.18.1060 90 EEVKLLK|ES 0.049 . LmjF.18.1060 95 LKESLLR|SC 0.097 . LmjF.18.1060 100 LRSCVSK|LS 0.074 . LmjF.18.1060 105 SKLSLQR|IK 0.074 . LmjF.18.1060 107 LSLQRIK|LD 0.065 . LmjF.18.1060 117 ASANIIR|QL 0.105 . LmjF.18.1060 132 LVSVVLR|DT 0.117 . LmjF.18.1060 152 LIVDLNR|LN 0.082 . LmjF.18.1060 169 TAGAQQK|AS 0.081 . LmjF.18.1060 175 KASAVAR|WM 0.108 . LmjF.18.1060 180 ARWMLFR|GK 0.117 . LmjF.18.1060 182 WMLFRGK|ND 0.058 . LmjF.18.1060 185 FRGKNDR|GF 0.127 . LmjF.18.1060 192 GFCATVK|LS 0.065 . LmjF.18.1060 199 LSSSATR|KV 0.247 . LmjF.18.1060 200 SSSATRK|VT 0.122 . LmjF.18.1060 234 AGMETIR|WN 0.080 . LmjF.18.1060 237 ETIRWNK|YY 0.100 . LmjF.18.1060 253 AGLGNSK|AP 0.054 . LmjF.18.1060 282 FYDVLYK|SL 0.066 . LmjF.18.1060 288 KSLVVER|YP 0.127 . LmjF.18.1060 298 AGLYVFR|LF 0.075 . LmjF.18.1060 342 YAAVLEK|AV 0.100 . LmjF.18.1060 346 LEKAVAK|AI 0.095 . LmjF.18.1060 352 KAIGGYR|YI 0.083 . LmjF.18.1060 379 EVNLLSR|SS 0.102 . LmjF.18.1060 390 TTFDTLR|AL 0.109 . LmjF.18.1060 398 LSEYGHK|LV 0.074 . LmjF.18.1060 435 ETDACQK|NG 0.057 . LmjF.18.1060 453 AAPSSGR|AL 0.091 . LmjF.18.1060 456 SSGRALK|YA 0.290 . LmjF.18.1060 465 FEYEMYK|TE 0.060 . LmjF.18.1060 473 EEVNGNR|VL 0.072 . LmjF.18.1060 488 FAATFER|VF 0.069 . LmjF.18.1060 504 DAVSDHK|TT 0.059 . LmjF.18.1060 524 SSSQFAK|NP 0.080 . LmjF.18.1060 533 SFLIQNK|GK 0.072 . LmjF.18.1060 535 LIQNKGK|SS 0.135 . LmjF.18.1060 557 DTTIGAK|CL 0.060 . LmjF.18.1060 562 AKCLFYK|AA 0.087 . LmjF.18.1060 573 ENGAFLR|RY 0.095 . LmjF.18.1060 574 NGAFLRR|YN 0.126 . LmjF.18.1060 605 NLLPTER|LQ 0.063 . LmjF.18.1060 613 QMTLSSR|VP 0.070 . LmjF.18.1060 619 RVPSNFR|IR 0.069 . LmjF.18.1060 621 PSNFRIR|IS 0.108 . LmjF.18.1060 645 SSTFSAK|WN 0.062 . LmjF.18.1060 651 KWNTLFK|AK 0.067 . LmjF.18.1060 653 NTLFKAK|RF 0.077 . LmjF.18.1060 654 TLFKAKR|FS 0.348 . LmjF.18.1060 664 DIFQLNR|IS 0.084 . LmjF.18.1060 695 LGVLGWK|GT 0.067 . LmjF.18.1060 706 DVVDAAK|PH 0.058 . LmjF.18.1060 715 FSTQQER|ST 0.127 . LmjF.18.1060 743 PYCCGSR|CP 0.071 . LmjF.18.1060 755 DLTVFCK|ES 0.067 . LmjF.18.1060 762 ESFTQSR|VK 0.086 . LmjF.18.1060 764 FTQSRVK|TA 0.075 . LmjF.18.1060 770 KTASVLR|CT 0.096 . LmjF.18.1060 773 SVLRCTK|T- 0.096 . ____________________________^_________________

  • Fasta :-

    >LmjF.18.1060 ATGCACATAAAGCGCAACAAAAACTGGGAACCCATGACAGTGACACGGGAGCAGTCATAT ATCTCTGTATGCAAGGAACTAAATGACGCCCCTCTTCGCCAGCTTCAAGAGACCTTGAAG TATGGCGATACAAGGCTTGATGTCAGCGGAATTTACTTACCACGGAAGCACTTTCGCTGC GTACTGCAATTTATTGAGGAGCGCCCCGACATCGAAGAGCTAATCTTGGATGGCGCGAAC ATAGGTGTGGAGGAGGTGAAGCTACTGAAAGAGTCACTGCTGCGTTCTTGCGTGTCGAAG CTGAGCCTGCAACGGATAAAGCTGGACTCTGCAAGCGCGAATATTATTCGTCAACTCTGC ATTGAAAATTCGAACTTAGTGTCTGTTGTACTGAGAGACACATGCATCCCTTCTTATCTA GTCGATGAAATTATGCTGATTGTTGATTTGAATCGCTTGAACGCGGAATCGCTGAGCTCC ACGTCTACTGCAGGGGCGCAACAGAAGGCCTCGGCTGTGGCACGGTGGATGCTTTTCAGA GGAAAAAACGACCGTGGCTTTTGTGCGACTGTGAAGCTATCATCTAGTGCGACGAGAAAA GTTACCGACGGTTTTGTTACATCGTACGATTCTGTTTTCAGCGATATTTCTTTTCAGCAA GACGCTTTCGACCACCCTGTTGCAGGGATGGAAACAATTCGTTGGAATAAATACTATGCA CTGCACTCCTTTCAGGAAGCTGGGCTGGGAAACTCCAAAGCTCCTTTCTCGCCATCGCCT CATTACAACAACCAGAATTTGTGCGCTGCTTTGAATATTCTCAGCTTTTACGATGTCCTA TACAAGTCGTTAGTTGTAGAACGATACCCTGAGGCTGGACTGTACGTTTTTCGCCTTTTT GTTGGGGAATCACCTGTTGAGGTGTACGTTGACGATTTAGTTCCATGCGTTCACTTAGAT GCGACGTGCACCATTGTAGGTTTGAATTCGTGCAGTAGCCCGTTTTACGCCGCGGTTCTT GAGAAGGCTGTTGCAAAAGCAATCGGTGGTTATCGCTACATCCAAGAACTATCGTTAAGT GACTGCATCGAGCTTCTAACAGGTTGCACAGGTTTCGAAGTGAATTTATTGAGCCGATCA TCGTTTTCTACCACTTTCGACACGCTACGAGCCCTGAGCGAGTATGGACACAAACTGGTC GCGTGCGCCATTCCGCATACCTCGATTGAGGAACAGACGTTTGAAGAAAGTGGGGTCTGC TGCGGGATTCCGTACGCTATTTTGGAAACGGATGCTTGCCAAAAAAATGGTTCTCACTAT GCTTTTTTGATCCAGGTGGCTGCCCCGTCGAGTGGAAGGGCCCTGAAGTACGCATTTGAG TATGAGATGTACAAAACGGAAGAGGTGAACGGGAATCGTGTTTTGTGGATGACGTTTGAA GACTTTGCTGCTACGTTCGAGCGCGTTTTTCTTCTGCTGTGGCCTTTCGACGACGCTGTA TCGGATCATAAGACGACTGTGGAGTTTCAAGTGACAAGCGAGTTTTTGTCTTCATCTTCT CAATTCGCCAAGAACCCCAGTTTCTTGATTCAAAACAAAGGAAAGAGCTCAAGCCCGATT ATGGTGTCGCTATCCACTTCTTCCGCACCCGACACCACAATTGGAGCCAAATGTCTTTTT TACAAGGCCGCTAATACTGAGAATGGGGCTTTCCTGCGTCGCTACAATGTATGCGAAAAC AACGCATCTTTTGGCTTAGAGGTTTTTGAAGGGAATGAGGGCTCTGTTTTTTTCAATCTG CTCCCCACAGAGCGCCTGCAGATGACCCTTTCTTCGCGTGTACCAAGCAATTTTAGGATT CGAATATCTTCCGTGGAGAATGTTGACGCAATGCAGCTCCCAGACATTATGGCTTCGTCG ACTTTTTCTGCAAAGTGGAACACACTCTTTAAGGCAAAGCGTTTTTCTGACGATATATTT CAGCTTAACAGGATTAGTGGTGGATGCACTCTCAGTCTTGTGCTTGCTCTCTCTCAAGCC ACTGACAGCAGCCCTCCTTTCCCGCTCGGAGTGCTTGGTTGGAAGGGTACTTCTATCGAC GTTGTCGATGCAGCCAAACCACATTTTTCCACACAACAGGAAAGGAGCACTGTCTGCGTA CATAGCTTCCTGCTTACTCTCGCTGCTGGTGAAAGCTTCTTTCTCCTTCCTTACTGCTGC GGAAGCCGATGTCCGGATGGTTATGATCTTACAGTTTTCTGCAAGGAGAGCTTTACGCAG AGCAGAGTGAAAACGGCCTCTGTGCTACGATGTACAAAGACCTGA
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  • Fasta :-

    MHIKRNKNWEPMTVTREQSYISVCKELNDAPLRQLQETLKYGDTRLDVSGIYLPRKHFRC VLQFIEERPDIEELILDGANIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASANIIRQLC IENSNLVSVVLRDTCIPSYLVDEIMLIVDLNRLNAESLSSTSTAGAQQKASAVARWMLFR GKNDRGFCATVKLSSSATRKVTDGFVTSYDSVFSDISFQQDAFDHPVAGMETIRWNKYYA LHSFQEAGLGNSKAPFSPSPHYNNQNLCAALNILSFYDVLYKSLVVERYPEAGLYVFRLF VGESPVEVYVDDLVPCVHLDATCTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLS DCIELLTGCTGFEVNLLSRSSFSTTFDTLRALSEYGHKLVACAIPHTSIEEQTFEESGVC CGIPYAILETDACQKNGSHYAFLIQVAAPSSGRALKYAFEYEMYKTEEVNGNRVLWMTFE DFAATFERVFLLLWPFDDAVSDHKTTVEFQVTSEFLSSSSQFAKNPSFLIQNKGKSSSPI MVSLSTSSAPDTTIGAKCLFYKAANTENGAFLRRYNVCENNASFGLEVFEGNEGSVFFNL LPTERLQMTLSSRVPSNFRIRISSVENVDAMQLPDIMASSTFSAKWNTLFKAKRFSDDIF QLNRISGGCTLSLVLALSQATDSSPPFPLGVLGWKGTSIDVVDAAKPHFSTQQERSTVCV HSFLLTLAAGESFFLLPYCCGSRCPDGYDLTVFCKESFTQSRVKTASVLRCTKT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.18.1060408 SIPHTSIEEQ0.991unspLmjF.18.1060408 SIPHTSIEEQ0.991unspLmjF.18.1060408 SIPHTSIEEQ0.991unspLmjF.18.1060623 SRIRISSVEN0.993unspLmjF.18.1060624 SIRISSVENV0.995unspLmjF.18.1060257 SKAPFSPSPH0.992unspLmjF.18.1060393 SLRALSEYGH0.997unsp

LmjF.18.1060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India