LmjF.19.1590 | ATP-dependent zinc metallopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0004222      

  • Computed_GO_Functions:  ATP binding      metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.19.1590OTHER0.9999610.0000100.000029
No Results

  • Fasta :-

    >LmjF.19.1590 MDPLQREASKNGEEGAAGAKSPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVAL IIALVMRRRARLTTQAPSGAAPKEGGFFSEMQKMMRQTMNPMGEKDFKVSVKDTKFSDVI GVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPGTGKTLLAKAVAGEASVPFYS CSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT INQLLAELDGLQSNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFHHY LTRVACEDAVSLSKKLAELTPGVSPATIAAIVNEGALSAAIKDNAVVTAVDLLPAIDDVL VGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKISITPRGPAGGFTQQVGREVL DMATEFSLFTDVCVMLGGRLAEMTQHESLTTGAQDDYQRATQTAIREFLAFGMSRQVGLL SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDAVLQKLAASLFER KELLREDIEAIVGPRPGTSSAVSEQTRAALRRFVDASEAAALQRQTAREAICATLSTA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/258 Sequence name : 258 Sequence length : 598 VALUES OF COMPUTED PARAMETERS Coef20 : 2.888 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.294 2.718 0.472 0.882 MesoH : -0.402 0.545 -0.286 0.254 MuHd_075 : 17.230 8.612 5.052 4.703 MuHd_095 : 45.066 21.653 11.346 7.757 MuHd_100 : 39.398 16.870 9.554 6.893 MuHd_105 : 28.799 10.965 6.719 5.423 Hmax_075 : -0.400 1.500 -1.416 2.680 Hmax_095 : 7.300 5.000 -0.201 3.160 Hmax_100 : 7.300 5.000 -0.201 3.090 Hmax_105 : -5.700 -3.325 -3.382 0.928 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9788 0.0212 DFMC : 0.9838 0.0162
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 598 LmjF.19.1590 MDPLQREASKNGEEGAAGAKSPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVALIIALVMRRRARLTTQAPSGA 80 APKEGGFFSEMQKMMRQTMNPMGEKDFKVSVKDTKFSDVIGVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPG 160 TGKTLLAKAVAGEASVPFYSCSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT 240 INQLLAELDGLQSNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFHHYLTRVACEDAVSLSKKLAELT 320 PGVSPATIAAIVNEGALSAAIKDNAVVTAVDLLPAIDDVLVGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKI 400 SITPRGPAGGFTQQVGREVLDMATEFSLFTDVCVMLGGRLAEMTQHESLTTGAQDDYQRATQTAIREFLAFGMSRQVGLL 480 SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDAVLQKLAASLFERKELLREDIEAIVGPRPGTSS 560 AVSEQTRAALRRFVDASEAAALQRQTAREAICATLSTA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...........P.......................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.19.1590 6 -MDPLQR|EA 0.104 . LmjF.19.1590 10 LQREASK|NG 0.072 . LmjF.19.1590 20 EGAAGAK|SP 0.074 . LmjF.19.1590 26 KSPSYFR|GF 0.108 . LmjF.19.1590 33 GFFDAEK|RR 0.055 . LmjF.19.1590 34 FFDAEKR|RK 0.092 . LmjF.19.1590 35 FDAEKRR|KV 0.234 . LmjF.19.1590 36 DAEKRRK|VV 0.094 . LmjF.19.1590 67 IIALVMR|RR 0.081 . LmjF.19.1590 68 IALVMRR|RA 0.103 . LmjF.19.1590 69 ALVMRRR|AR 0.101 . LmjF.19.1590 71 VMRRRAR|LT 0.378 . LmjF.19.1590 83 PSGAAPK|EG 0.065 . LmjF.19.1590 93 FFSEMQK|MM 0.067 . LmjF.19.1590 96 EMQKMMR|QT 0.090 . LmjF.19.1590 105 MNPMGEK|DF 0.067 . LmjF.19.1590 108 MGEKDFK|VS 0.060 . LmjF.19.1590 112 DFKVSVK|DT 0.074 . LmjF.19.1590 115 VSVKDTK|FS 0.076 . LmjF.19.1590 137 QYVNFLK|TP 0.057 . LmjF.19.1590 144 TPQVFTR|LG 0.128 . LmjF.19.1590 148 FTRLGGR|LP 0.073 . LmjF.19.1590 151 LGGRLPK|GC 0.110 . LmjF.19.1590 163 GEPGTGK|TL 0.058 . LmjF.19.1590 168 GKTLLAK|AV 0.076 . LmjF.19.1590 196 YAGSGPK|RV 0.069 . LmjF.19.1590 197 AGSGPKR|VR 0.149 . LmjF.19.1590 199 SGPKRVR|EL 0.095 . LmjF.19.1590 206 ELFAAAK|KD 0.061 . LmjF.19.1590 207 LFAAAKK|DA 0.127 . LmjF.19.1590 224 IDAVGSR|SS 0.182 . LmjF.19.1590 239 LSSEENR|TI 0.131 . LmjF.19.1590 271 FVDSLDK|AL 0.056 . LmjF.19.1590 275 LDKALLR|EG 0.071 . LmjF.19.1590 278 ALLREGR|FD 0.300 . LmjF.19.1590 281 REGRFDR|KV 0.439 . LmjF.19.1590 282 EGRFDRK|VE 0.071 . LmjF.19.1590 290 EIPMPDR|QA 0.095 . LmjF.19.1590 293 MPDRQAR|QD 0.248 . LmjF.19.1590 303 FHHYLTR|VA 0.093 . LmjF.19.1590 314 DAVSLSK|KL 0.057 . LmjF.19.1590 315 AVSLSKK|LA 0.140 . LmjF.19.1590 342 ALSAAIK|DN 0.083 . LmjF.19.1590 363 DDVLVGK|KH 0.059 . LmjF.19.1590 364 DVLVGKK|HR 0.075 . LmjF.19.1590 366 LVGKKHR|SR 0.111 . LmjF.19.1590 368 GKKHRSR|MS 0.146 . LmjF.19.1590 375 MSDDAAR|RV 0.116 . LmjF.19.1590 376 SDDAARR|VA 0.113 . LmjF.19.1590 399 EQTDVVK|IS 0.058 . LmjF.19.1590 405 KISITPR|GP 0.141 . LmjF.19.1590 417 FTQQVGR|EV 0.118 . LmjF.19.1590 439 CVMLGGR|LA 0.087 . LmjF.19.1590 459 AQDDYQR|AT 0.106 . LmjF.19.1590 466 ATQTAIR|EF 0.080 . LmjF.19.1590 475 LAFGMSR|QV 0.105 . LmjF.19.1590 486 LSYEPQR|LS 0.098 . LmjF.19.1590 491 QRLSEGR|MH 0.095 . LmjF.19.1590 495 EGRMHQK|HS 0.086 . LmjF.19.1590 502 HSEAAHK|MA 0.082 . LmjF.19.1590 510 AEEEAAR|LV 0.108 . LmjF.19.1590 520 AASDHVK|ML 0.075 . LmjF.19.1590 524 HVKMLLR|SH 0.140 . LmjF.19.1590 532 HDAVLQK|LA 0.066 . LmjF.19.1590 540 AASLFER|KE 0.080 . LmjF.19.1590 541 ASLFERK|EL 0.068 . LmjF.19.1590 545 ERKELLR|ED 0.087 . LmjF.19.1590 555 EAIVGPR|PG 0.075 . LmjF.19.1590 567 AVSEQTR|AA 0.105 . LmjF.19.1590 571 QTRAALR|RF 0.077 . LmjF.19.1590 572 TRAALRR|FV 0.623 *ProP* LmjF.19.1590 584 EAAALQR|QT 0.090 . LmjF.19.1590 588 LQRQTAR|EA 0.125 . ____________________________^_________________

  • Fasta :-

    >LmjF.19.1590 ATGGATCCTCTGCAACGGGAGGCGTCCAAGAACGGCGAGGAGGGGGCGGCGGGGGCAAAG AGCCCCTCCTACTTCCGCGGCTTCTTCGACGCAGAGAAGCGCCGCAAGGTGGTTAACCAT GACCCTACCGTAGGCCAGGCCATTGGCGGTGCCGTTGTAATGGCACTCCCGGTGGCGCTC ATCATCGCTTTGGTGATGCGTCGACGCGCGCGCCTCACCACTCAGGCGCCATCCGGCGCC GCACCGAAGGAGGGCGGCTTCTTCAGCGAGATGCAGAAGATGATGCGGCAGACCATGAAC CCGATGGGTGAGAAGGACTTCAAGGTGTCGGTGAAAGACACGAAGTTTAGCGACGTCATC GGTGTACCAGAGGCACTGGCAGAGGTACAGCAGTACGTCAACTTCCTGAAGACGCCGCAA GTTTTCACCCGGCTCGGCGGCCGCCTACCAAAGGGTTGTATTCTCACAGGAGAGCCCGGC ACCGGCAAGACGCTGCTCGCAAAGGCGGTGGCCGGCGAGGCGAGCGTTCCCTTCTACAGC TGCAGTGGTGCTGACTTCATCGAGGTGTACGCCGGCTCTGGACCAAAGCGAGTGCGCGAG CTCTTCGCGGCAGCCAAGAAAGATGCCCCGTCTGTTATCTTCATCGACGAGATCGACGCC GTCGGCTCGCGCAGCAGCGGGAACGGTGCGATGGGTCTCAGCAGCGAGGAGAATCGAACC ATCAATCAACTGCTGGCCGAGCTGGACGGCCTGCAATCTAACGAGGCGGTCGTCGTGTTC GCGGCTACGAACTTCGTGGACAGCCTAGACAAGGCACTGCTGCGCGAGGGCCGCTTTGAC CGCAAGGTCGAGATCCCGATGCCGGACAGGCAGGCTCGCCAGGACCTCTTCCACCACTAT CTTACCCGCGTCGCCTGCGAGGATGCCGTGTCGCTCTCGAAGAAACTGGCCGAGCTGACT CCTGGAGTGTCTCCAGCCACCATCGCAGCCATTGTCAACGAGGGCGCTCTCAGCGCCGCC ATAAAGGACAACGCCGTCGTCACCGCCGTGGACCTCCTCCCCGCGATTGACGACGTACTC GTCGGCAAGAAGCACCGCAGTCGCATGAGCGATGATGCTGCGAGAAGGGTGGCGCTACAC GAGAGCGGCCACGCACTCGTGGCATGGCTGCTGCCGGAGCAGACAGACGTGGTCAAGATC TCCATCACGCCGCGCGGCCCCGCCGGGGGCTTCACCCAGCAGGTCGGCCGCGAGGTGTTG GACATGGCGACTGAGTTCTCGCTCTTCACGGACGTTTGCGTCATGCTGGGTGGGCGGCTG GCGGAGATGACGCAGCATGAGTCCCTCACCACCGGTGCTCAGGACGACTACCAGCGGGCG ACTCAGACGGCCATTCGTGAGTTCCTTGCGTTTGGTATGTCTCGCCAGGTCGGTCTCCTC TCATACGAGCCGCAGCGACTCAGCGAGGGCCGCATGCACCAGAAGCACTCGGAGGCGGCA CATAAGATGGCGGAGGAGGAGGCGGCCCGCCTGGTCGCTGCCGCGTCTGATCACGTGAAG ATGCTCTTGCGCTCTCATGATGCAGTACTGCAGAAGCTAGCGGCTTCGCTCTTCGAGAGG AAGGAGCTGCTGCGCGAGGATATAGAAGCGATTGTGGGACCGCGCCCTGGAACCAGCTCG GCCGTGTCGGAGCAGACGCGTGCGGCGCTTCGCCGCTTCGTCGACGCGTCTGAAGCCGCA GCGCTGCAACGCCAGACCGCAAGAGAGGCGATATGTGCAACCCTTTCTACTGCGTAA
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  • Fasta :-

    MDPLQREASKNGEEGAAGAKSPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVAL IIALVMRRRARLTTQAPSGAAPKEGGFFSEMQKMMRQTMNPMGEKDFKVSVKDTKFSDVI GVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPGTGKTLLAKAVAGEASVPFYS CSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT INQLLAELDGLQSNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFHHY LTRVACEDAVSLSKKLAELTPGVSPATIAAIVNEGALSAAIKDNAVVTAVDLLPAIDDVL VGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKISITPRGPAGGFTQQVGREVL DMATEFSLFTDVCVMLGGRLAEMTQHESLTTGAQDDYQRATQTAIREFLAFGMSRQVGLL SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDAVLQKLAASLFER KELLREDIEAIVGPRPGTSSAVSEQTRAALRRFVDASEAAALQRQTAREAICATLSTA

  • title: ATP binding site
  • coordinates: E158,P159,G160,T161,G162,K163,T164,L165,D216,N264
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.19.1590370 SRSRMSDDAA0.99unspLmjF.19.1590370 SRSRMSDDAA0.99unspLmjF.19.1590370 SRSRMSDDAA0.99unspLmjF.19.1590586 TLQRQTAREA0.992unspLmjF.19.1590110 SDFKVSVKDT0.998unspLmjF.19.1590234 SAMGLSSEEN0.99unsp

LmjF.19.1590      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India