LmjF.20.1180 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.20.1180OTHER0.9998410.0001430.000015
No Results

  • Fasta :-

    >LmjF.20.1180 MSQDQLNDEGRWTEIEEEAPQEQETPDAPDQAEDCNEAAPTEEQAEDCNEAAPTEEQAED CNEAAPTEEQAEDCNEAAPTEEQAEDCNEAAPIEAQAEDCNEAAPTEAQAEDCNEAAPTE EQAEDCNEAAPTEAQADGAADGPVQCQDLGDEEQPQPPSEKTQQAEECPEDVVPLEASET QEHETPGADEADEGERAEYLAQEPHSPQYYLAGSEAQVVPQQAYEEEAPQKYPEETGNNY DAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPPSAIVKPRTRNVKSVARWEAMEYDLRD GSDDEFELSTCMAPVYEGEGEEGNEDASVFKHGEPDCKGEILSCFDEPNLLYRIIDPKAK TWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLRQNEEGQYVMEVVVYPTETEMFLQGTA NGFTSKLRAVPLTEDYHNARRGITEELVNNEVAAIQQVTSSDNAEDVLQACIDSGIPFVD PEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRANVRPGCVGAGDLGDSWV ICSVASVSEDPARLMGMFRHPEGKAAAQREHAVGAYRVTFNKNGWWRSVLVDSYLPVSGG KLKYAKSATDPAEIWPAILEKAYAKLHGSYARICSGDPLHALQDMTGFSTMRFDDSLTDD KASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQELCEAYAQVGLVTGCAYTILEAKHIE SKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANPDIAEECNFQKAENGMFWMSWKDARKY FNGGGVCFTHQPAYDYRMNCVFTEGVPSAVLEIEVRSPTCFTFVISQDDKRCQVNALEYK PVMISIAEPVEDGMYKVVMNSSANGARPTSDKWMFLQARDVSLIHKLDAGKYIVVPRIMP SDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDAGNRVFENFPKFEPELMEVEQPVQYQK RAPGEAFPMTQMGEEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/158 Sequence name : 158 Sequence length : 976 VALUES OF COMPUTED PARAMETERS Coef20 : 2.755 CoefTot : -0.043 ChDiff : -108 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.176 0.157 0.481 MesoH : -0.716 0.172 -0.340 0.151 MuHd_075 : 26.646 18.832 8.017 3.972 MuHd_095 : 14.847 2.607 2.417 2.330 MuHd_100 : 23.640 7.269 4.573 3.533 MuHd_105 : 28.773 10.404 6.235 4.379 Hmax_075 : -2.333 3.267 -2.760 2.368 Hmax_095 : -10.063 -5.863 -5.233 -0.297 Hmax_100 : -13.400 -8.500 -6.117 -0.380 Hmax_105 : -11.550 -5.800 -6.117 0.233 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9971 0.0029 DFMC : 0.9821 0.0179
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 976 LmjF.20.1180 MSQDQLNDEGRWTEIEEEAPQEQETPDAPDQAEDCNEAAPTEEQAEDCNEAAPTEEQAEDCNEAAPTEEQAEDCNEAAPT 80 EEQAEDCNEAAPIEAQAEDCNEAAPTEAQAEDCNEAAPTEEQAEDCNEAAPTEAQADGAADGPVQCQDLGDEEQPQPPSE 160 KTQQAEECPEDVVPLEASETQEHETPGADEADEGERAEYLAQEPHSPQYYLAGSEAQVVPQQAYEEEAPQKYPEETGNNY 240 DAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPPSAIVKPRTRNVKSVARWEAMEYDLRDGSDDEFELSTCMAPVYEGEG 320 EEGNEDASVFKHGEPDCKGEILSCFDEPNLLYRIIDPKAKTWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLRQNEEGQ 400 YVMEVVVYPTETEMFLQGTANGFTSKLRAVPLTEDYHNARRGITEELVNNEVAAIQQVTSSDNAEDVLQACIDSGIPFVD 480 PEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRANVRPGCVGAGDLGDSWVICSVASVSEDPARLMGMFRH 560 PEGKAAAQREHAVGAYRVTFNKNGWWRSVLVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYARICSGDPLH 640 ALQDMTGFSTMRFDDSLTDDKASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQELCEAYAQVGLVTGCAYTILEAKHIE 720 SKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANPDIAEECNFQKAENGMFWMSWKDARKYFNGGGVCFTHQPAYDYRMNC 800 VFTEGVPSAVLEIEVRSPTCFTFVISQDDKRCQVNALEYKPVMISIAEPVEDGMYKVVMNSSANGARPTSDKWMFLQARD 880 VSLIHKLDAGKYIVVPRIMPSDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDAGNRVFENFPKFEPELMEVEQPVQYQK 960 RAPGEAFPMTQMGEEV 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................ 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.20.1180 11 QLNDEGR|WT 0.157 . LmjF.20.1180 161 PQPPSEK|TQ 0.064 . LmjF.20.1180 196 EADEGER|AE 0.069 . LmjF.20.1180 231 EEEAPQK|YP 0.070 . LmjF.20.1180 279 PPSAIVK|PR 0.071 . LmjF.20.1180 281 SAIVKPR|TR 0.102 . LmjF.20.1180 283 IVKPRTR|NV 0.112 . LmjF.20.1180 286 PRTRNVK|SV 0.399 . LmjF.20.1180 290 NVKSVAR|WE 0.080 . LmjF.20.1180 299 AMEYDLR|DG 0.099 . LmjF.20.1180 331 EDASVFK|HG 0.071 . LmjF.20.1180 338 HGEPDCK|GE 0.060 . LmjF.20.1180 353 EPNLLYR|II 0.148 . LmjF.20.1180 358 YRIIDPK|AK 0.070 . LmjF.20.1180 360 IIDPKAK|TW 0.065 . LmjF.20.1180 381 VQFIFGK|HS 0.061 . LmjF.20.1180 384 IFGKHSK|LQ 0.061 . LmjF.20.1180 394 LENTTLR|QN 0.113 . LmjF.20.1180 426 ANGFTSK|LR 0.058 . LmjF.20.1180 428 GFTSKLR|AV 0.112 . LmjF.20.1180 440 EDYHNAR|RG 0.088 . LmjF.20.1180 441 DYHNARR|GI 0.170 . LmjF.20.1180 496 LEAGASK|PF 0.061 . LmjF.20.1180 499 GASKPFK|PF 0.098 . LmjF.20.1180 505 KPFAWAR|PQ 0.111 . LmjF.20.1180 519 EMASQVR|LF 0.084 . LmjF.20.1180 522 SQVRLFR|AN 0.191 . LmjF.20.1180 526 LFRANVR|PG 0.086 . LmjF.20.1180 553 VSEDPAR|LM 0.104 . LmjF.20.1180 559 RLMGMFR|HP 0.103 . LmjF.20.1180 564 FRHPEGK|AA 0.106 . LmjF.20.1180 569 GKAAAQR|EH 0.089 . LmjF.20.1180 577 HAVGAYR|VT 0.091 . LmjF.20.1180 582 YRVTFNK|NG 0.057 . LmjF.20.1180 587 NKNGWWR|SV 0.162 . LmjF.20.1180 601 LPVSGGK|LK 0.059 . LmjF.20.1180 603 VSGGKLK|YA 0.075 . LmjF.20.1180 606 GKLKYAK|SA 0.098 . LmjF.20.1180 621 WPAILEK|AY 0.070 . LmjF.20.1180 625 LEKAYAK|LH 0.065 . LmjF.20.1180 632 LHGSYAR|IC 0.102 . LmjF.20.1180 652 TGFSTMR|FD 0.093 . LmjF.20.1180 661 DSLTDDK|AS 0.060 . LmjF.20.1180 687 ICSTPGR|GP 0.120 . LmjF.20.1180 692 GRGPHDK|DQ 0.102 . LmjF.20.1180 717 YTILEAK|HI 0.073 . LmjF.20.1180 722 AKHIESK|DL 0.075 . LmjF.20.1180 728 KDLQMVK|VR 0.058 . LmjF.20.1180 730 LQMVKVR|NV 0.145 . LmjF.20.1180 735 VRNVWGR|GV 0.397 . LmjF.20.1180 749 WGNDDAK|WD 0.062 . LmjF.20.1180 764 EECNFQK|AE 0.068 . LmjF.20.1180 775 MFWMSWK|DA 0.106 . LmjF.20.1180 778 MSWKDAR|KY 0.126 . LmjF.20.1180 779 SWKDARK|YF 0.109 . LmjF.20.1180 797 QPAYDYR|MN 0.112 . LmjF.20.1180 816 VLEIEVR|SP 0.089 . LmjF.20.1180 830 VISQDDK|RC 0.058 . LmjF.20.1180 831 ISQDDKR|CQ 0.154 . LmjF.20.1180 840 VNALEYK|PV 0.084 . LmjF.20.1180 856 VEDGMYK|VV 0.065 . LmjF.20.1180 867 SSANGAR|PT 0.145 . LmjF.20.1180 872 ARPTSDK|WM 0.068 . LmjF.20.1180 879 WMFLQAR|DV 0.164 . LmjF.20.1180 886 DVSLIHK|LD 0.059 . LmjF.20.1180 891 HKLDAGK|YI 0.062 . LmjF.20.1180 897 KYIVVPR|IM 0.083 . LmjF.20.1180 918 LGMICDK|EV 0.087 . LmjF.20.1180 928 NGDVSVK|FK 0.059 . LmjF.20.1180 930 DVSVKFK|RL 0.103 . LmjF.20.1180 931 VSVKFKR|LD 0.161 . LmjF.20.1180 937 RLDAGNR|VF 0.075 . LmjF.20.1180 944 VFENFPK|FE 0.062 . LmjF.20.1180 960 QPVQYQK|RA 0.064 . LmjF.20.1180 961 PVQYQKR|AP 0.321 . ____________________________^_________________

  • Fasta :-

    >LmjF.20.1180 ATGTCTCAAGATCAGCTTAACGACGAGGGCCGGTGGACCGAGATCGAAGAGGAGGCTCCA CAGGAGCAGGAAACCCCCGACGCGCCTGACCAGGCTGAGGATTGCAACGAGGCCGCACCG ACAGAGGAGCAGGCTGAAGATTGCAACGAGGCCGCACCGACAGAGGAGCAGGCTGAGGAT TGCAACGAGGCCGCACCGACAGAGGAGCAGGCTGAGGATTGCAACGAGGCCGCACCGACA GAGGAGCAGGCTGAGGATTGCAACGAGGCCGCACCGATAGAGGCGCAGGCTGAGGATTGC AACGAGGCCGCACCGACAGAGGCGCAGGCTGAGGATTGCAACGAGGCCGCACCGACAGAG GAGCAGGCTGAAGATTGCAACGAGGCCGCACCGACAGAGGCGCAGGCTGACGGAGCCGCA GATGGACCTGTTCAATGTCAGGACCTGGGCGATGAAGAGCAACCTCAACCGCCATCTGAG AAGACACAGCAGGCCGAAGAGTGCCCAGAGGATGTCGTCCCGCTTGAGGCTTCCGAGACT CAGGAGCACGAGACCCCTGGGGCCGACGAGGCTGACGAGGGAGAGCGTGCCGAGTACTTA GCTCAGGAGCCCCACTCTCCTCAATATTACTTGGCGGGCAGCGAGGCTCAAGTAGTCCCG CAGCAGGCTTACGAGGAGGAGGCTCCCCAGAAGTACCCGGAAGAGACCGGCAATAACTAT GACGCTCCGCAGCACGCGTACGAAGTGGTGGCCCCTGACAACGCTCACGCCCCCTCGATG CCTGCGCCGCATGCTGCCGCTGCCGCTGCCGCTACGCCGCCGAGCGCGATCGTGAAGCCG CGGACGCGCAACGTGAAGAGCGTCGCTCGCTGGGAGGCGATGGAGTATGACCTGCGTGAC GGCAGCGACGATGAGTTCGAGCTGTCGACGTGCATGGCGCCGGTATACGAGGGCGAGGGT GAGGAGGGCAACGAGGACGCGAGCGTGTTCAAGCACGGCGAGCCGGATTGCAAGGGGGAG ATCTTGTCGTGCTTCGACGAGCCGAACTTGCTGTACCGGATCATTGACCCGAAGGCGAAG ACGTGGGCGTTTTACAACGACAGCCTGCAGTACGAGATGCATGTGCAGTTCATATTTGGC AAGCACTCGAAGCTGCAGGCGCTGGAGAACACGACGCTGCGGCAGAACGAAGAGGGCCAA TACGTGATGGAGGTGGTCGTGTACCCGACGGAGACTGAGATGTTTTTACAGGGCACTGCG AACGGGTTCACAAGCAAGCTGCGCGCTGTGCCACTGACGGAGGACTACCACAATGCGCGC CGCGGGATCACGGAGGAGCTGGTGAACAACGAGGTGGCTGCGATCCAGCAGGTGACGAGC AGCGACAACGCGGAGGACGTGCTGCAGGCGTGCATCGACAGCGGGATCCCGTTCGTGGAC CCCGAGTTCCCACCGTGCCAGGCGTCGCTGGAAGCTGGCGCGAGCAAGCCGTTCAAGCCG TTTGCGTGGGCGCGGCCGCAGGCGTGCGTGCCGGAGGAGATGGCGTCGCAGGTGCGACTG TTCCGCGCGAACGTGAGGCCCGGCTGCGTGGGCGCTGGCGACCTCGGCGACTCGTGGGTG ATTTGCTCTGTTGCATCGGTGTCGGAGGACCCTGCGCGGCTGATGGGGATGTTCCGCCAC CCGGAGGGCAAGGCTGCGGCACAGCGCGAGCACGCGGTCGGCGCGTACCGCGTGACGTTC AACAAAAATGGGTGGTGGCGCAGCGTGCTGGTGGACAGCTACCTGCCTGTGTCCGGCGGC AAGCTGAAGTACGCGAAGAGCGCGACGGACCCGGCGGAGATCTGGCCTGCGATCCTGGAG AAGGCGTACGCGAAGCTGCACGGCAGCTACGCGAGGATCTGCTCCGGCGACCCGCTGCAC GCGCTGCAGGACATGACCGGGTTCTCGACGATGCGCTTCGACGATTCGCTGACGGACGAC AAGGCGAGCGACCAGCTGTTCAGCGACCTTGTGCACGGGACTGCTGCAGGGTACACGGTG ATCTGCAGCACGCCCGGGCGCGGGCCGCACGACAAAGACCAGGAGCTGTGCGAGGCGTAC GCGCAGGTGGGGCTTGTGACCGGGTGTGCGTACACGATCCTGGAGGCGAAGCACATCGAG AGCAAGGACCTGCAGATGGTGAAGGTACGCAACGTGTGGGGGCGCGGCGTGGAGTGGAGC GGCAACTGGGGCAACGACGACGCAAAATGGGACGCGAACCCGGACATCGCGGAGGAATGC AACTTCCAGAAGGCGGAGAATGGGATGTTCTGGATGTCGTGGAAGGACGCGCGGAAGTAC TTCAACGGTGGTGGCGTGTGCTTCACGCACCAGCCGGCGTACGACTACCGCATGAACTGC GTGTTCACGGAAGGCGTGCCGTCCGCTGTGCTGGAGATCGAGGTGCGGTCGCCTACGTGC TTCACGTTTGTGATTTCACAGGACGACAAGCGGTGCCAGGTGAACGCGTTGGAGTACAAG CCTGTGATGATCAGCATTGCGGAGCCCGTGGAGGACGGCATGTACAAGGTCGTCATGAAC TCCTCGGCGAACGGCGCGCGGCCGACGTCGGACAAGTGGATGTTTCTGCAGGCACGCGAC GTTTCACTGATCCACAAGCTGGACGCTGGGAAGTACATTGTCGTGCCGCGCATCATGCCG TCGGATGACCCGGTGGAGCCTGTACCGTACGTTCTGGGGATGATCTGCGACAAGGAGGTC GGCAACGGCGACGTGAGCGTGAAGTTCAAGCGCCTGGACGCTGGCAACCGCGTGTTCGAG AACTTCCCGAAGTTCGAGCCGGAGCTGATGGAGGTGGAGCAACCGGTGCAGTACCAGAAG CGCGCGCCGGGCGAGGCATTCCCGATGACGCAGATGGGGGAGGAGGTGTAG
  • Download Fasta

  • Fasta :-

    MSQDQLNDEGRWTEIEEEAPQEQETPDAPDQAEDCNEAAPTEEQAEDCNEAAPTEEQAED CNEAAPTEEQAEDCNEAAPTEEQAEDCNEAAPIEAQAEDCNEAAPTEAQAEDCNEAAPTE EQAEDCNEAAPTEAQADGAADGPVQCQDLGDEEQPQPPSEKTQQAEECPEDVVPLEASET QEHETPGADEADEGERAEYLAQEPHSPQYYLAGSEAQVVPQQAYEEEAPQKYPEETGNNY DAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPPSAIVKPRTRNVKSVARWEAMEYDLRD GSDDEFELSTCMAPVYEGEGEEGNEDASVFKHGEPDCKGEILSCFDEPNLLYRIIDPKAK TWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLRQNEEGQYVMEVVVYPTETEMFLQGTA NGFTSKLRAVPLTEDYHNARRGITEELVNNEVAAIQQVTSSDNAEDVLQACIDSGIPFVD PEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRANVRPGCVGAGDLGDSWV ICSVASVSEDPARLMGMFRHPEGKAAAQREHAVGAYRVTFNKNGWWRSVLVDSYLPVSGG KLKYAKSATDPAEIWPAILEKAYAKLHGSYARICSGDPLHALQDMTGFSTMRFDDSLTDD KASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQELCEAYAQVGLVTGCAYTILEAKHIE SKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANPDIAEECNFQKAENGMFWMSWKDARKY FNGGGVCFTHQPAYDYRMNCVFTEGVPSAVLEIEVRSPTCFTFVISQDDKRCQVNALEYK PVMISIAEPVEDGMYKVVMNSSANGARPTSDKWMFLQARDVSLIHKLDAGKYIVVPRIMP SDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDAGNRVFENFPKFEPELMEVEQPVQYQK RAPGEAFPMTQMGEEV

  • title: catalytic site
  • coordinates: S538,C709,N731
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.20.1180656 SRFDDSLTDD0.996unspLmjF.20.1180656 SRFDDSLTDD0.996unspLmjF.20.1180656 SRFDDSLTDD0.996unspLmjF.20.1180773 SMFWMSWKDA0.997unspLmjF.20.1180870 SARPTSDKWM0.997unspLmjF.20.1180926 SNGDVSVKFK0.992unspLmjF.20.1180302 SLRDGSDDEF0.995unspLmjF.20.1180546 SCSVASVSED0.993unsp

LmjF.20.1180      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India