LmjF.20.1185 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.20.1185OTHER0.9999870.0000110.000002
No Results

  • Fasta :-

    >LmjF.20.1185 MSHNGTAGEWRELGEEQPTLSSKPQDAAMNTYVTKEADEGERAEYLAQEPHSPQYYLAGS EAQVVPQQAYEEEAPQKYPEETGNNYDAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPP SAIVKPRTRNVKSVARWEAVEYDLRDGSDDEFELSTCMAPVYEGEGKEGNEDASVFKHGE PDCKGEILSCFDEPNLLYRIIDPKAKTWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLR QNEEGQYVMEVVVYPTETEMFLQGTANGFTSKLRAVPLTEDYHNARRGITEELVNNEVAA IQQVTSSDNAEDVLQACIDSGIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEM ASQVRLFRANVRPGCVGAGDLGDSWVICSVASVSEDPARLMGMFRHPEGKAAAQREHAVG AYRVTFNKNGWWRSVLVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYARIC SGDPLHALQDMTGFSTMRFDDSLTDDKASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQ ELCEAYAQVGLVTGCAYTILEAKHIESKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANP DIAEECNFQKAENGMFWMSWKDARKYFNGGGVCFTHQPAYDYRMNCVFTEGVPSAVLEIE VRSPTCFTFVISQDDKRCQVNALEYKPVMISIAEPVEDGMYKVVMNSSANGARPTSDKWM FLQARDVSLIHKLDAGKYIVVPRIMPSDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDA GNRVFENFPKFEPELMEVEQPVQYQKRAPGEAFPMTQMGEEVM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/62 Sequence name : 62 Sequence length : 823 VALUES OF COMPUTED PARAMETERS Coef20 : 2.880 CoefTot : -0.620 ChDiff : -46 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.176 0.157 0.481 MesoH : -0.716 0.172 -0.340 0.151 MuHd_075 : 12.550 3.243 2.965 3.368 MuHd_095 : 25.339 8.214 5.000 3.724 MuHd_100 : 18.923 5.748 2.943 2.620 MuHd_105 : 15.285 5.172 1.763 2.060 Hmax_075 : 0.350 -4.667 -3.435 1.890 Hmax_095 : 0.175 -3.588 -3.841 1.059 Hmax_100 : 1.400 -3.100 -3.911 1.710 Hmax_105 : 1.400 -2.800 -3.911 2.053 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9914 0.0086 DFMC : 0.9830 0.0170
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 823 LmjF.20.1185 MSHNGTAGEWRELGEEQPTLSSKPQDAAMNTYVTKEADEGERAEYLAQEPHSPQYYLAGSEAQVVPQQAYEEEAPQKYPE 80 ETGNNYDAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPPSAIVKPRTRNVKSVARWEAVEYDLRDGSDDEFELSTCMAP 160 VYEGEGKEGNEDASVFKHGEPDCKGEILSCFDEPNLLYRIIDPKAKTWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLR 240 QNEEGQYVMEVVVYPTETEMFLQGTANGFTSKLRAVPLTEDYHNARRGITEELVNNEVAAIQQVTSSDNAEDVLQACIDS 320 GIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRANVRPGCVGAGDLGDSWVICSVASVSEDPARL 400 MGMFRHPEGKAAAQREHAVGAYRVTFNKNGWWRSVLVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYARIC 480 SGDPLHALQDMTGFSTMRFDDSLTDDKASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQELCEAYAQVGLVTGCAYTIL 560 EAKHIESKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANPDIAEECNFQKAENGMFWMSWKDARKYFNGGGVCFTHQPAY 640 DYRMNCVFTEGVPSAVLEIEVRSPTCFTFVISQDDKRCQVNALEYKPVMISIAEPVEDGMYKVVMNSSANGARPTSDKWM 720 FLQARDVSLIHKLDAGKYIVVPRIMPSDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDAGNRVFENFPKFEPELMEVEQ 800 PVQYQKRAPGEAFPMTQMGEEVM 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ....................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.20.1185 11 GTAGEWR|EL 0.169 . LmjF.20.1185 23 QPTLSSK|PQ 0.079 . LmjF.20.1185 35 MNTYVTK|EA 0.101 . LmjF.20.1185 42 EADEGER|AE 0.070 . LmjF.20.1185 77 EEEAPQK|YP 0.070 . LmjF.20.1185 125 PPSAIVK|PR 0.071 . LmjF.20.1185 127 SAIVKPR|TR 0.102 . LmjF.20.1185 129 IVKPRTR|NV 0.112 . LmjF.20.1185 132 PRTRNVK|SV 0.370 . LmjF.20.1185 136 NVKSVAR|WE 0.081 . LmjF.20.1185 145 AVEYDLR|DG 0.095 . LmjF.20.1185 167 VYEGEGK|EG 0.057 . LmjF.20.1185 177 EDASVFK|HG 0.071 . LmjF.20.1185 184 HGEPDCK|GE 0.060 . LmjF.20.1185 199 EPNLLYR|II 0.148 . LmjF.20.1185 204 YRIIDPK|AK 0.070 . LmjF.20.1185 206 IIDPKAK|TW 0.065 . LmjF.20.1185 227 VQFIFGK|HS 0.061 . LmjF.20.1185 230 IFGKHSK|LQ 0.061 . LmjF.20.1185 240 LENTTLR|QN 0.113 . LmjF.20.1185 272 ANGFTSK|LR 0.058 . LmjF.20.1185 274 GFTSKLR|AV 0.112 . LmjF.20.1185 286 EDYHNAR|RG 0.088 . LmjF.20.1185 287 DYHNARR|GI 0.170 . LmjF.20.1185 342 LEAGASK|PF 0.061 . LmjF.20.1185 345 GASKPFK|PF 0.098 . LmjF.20.1185 351 KPFAWAR|PQ 0.111 . LmjF.20.1185 365 EMASQVR|LF 0.084 . LmjF.20.1185 368 SQVRLFR|AN 0.191 . LmjF.20.1185 372 LFRANVR|PG 0.086 . LmjF.20.1185 399 VSEDPAR|LM 0.104 . LmjF.20.1185 405 RLMGMFR|HP 0.103 . LmjF.20.1185 410 FRHPEGK|AA 0.106 . LmjF.20.1185 415 GKAAAQR|EH 0.089 . LmjF.20.1185 423 HAVGAYR|VT 0.091 . LmjF.20.1185 428 YRVTFNK|NG 0.057 . LmjF.20.1185 433 NKNGWWR|SV 0.162 . LmjF.20.1185 447 LPVSGGK|LK 0.059 . LmjF.20.1185 449 VSGGKLK|YA 0.075 . LmjF.20.1185 452 GKLKYAK|SA 0.098 . LmjF.20.1185 467 WPAILEK|AY 0.070 . LmjF.20.1185 471 LEKAYAK|LH 0.065 . LmjF.20.1185 478 LHGSYAR|IC 0.102 . LmjF.20.1185 498 TGFSTMR|FD 0.093 . LmjF.20.1185 507 DSLTDDK|AS 0.060 . LmjF.20.1185 533 ICSTPGR|GP 0.120 . LmjF.20.1185 538 GRGPHDK|DQ 0.102 . LmjF.20.1185 563 YTILEAK|HI 0.073 . LmjF.20.1185 568 AKHIESK|DL 0.075 . LmjF.20.1185 574 KDLQMVK|VR 0.058 . LmjF.20.1185 576 LQMVKVR|NV 0.145 . LmjF.20.1185 581 VRNVWGR|GV 0.397 . LmjF.20.1185 595 WGNDDAK|WD 0.062 . LmjF.20.1185 610 EECNFQK|AE 0.068 . LmjF.20.1185 621 MFWMSWK|DA 0.106 . LmjF.20.1185 624 MSWKDAR|KY 0.126 . LmjF.20.1185 625 SWKDARK|YF 0.109 . LmjF.20.1185 643 QPAYDYR|MN 0.112 . LmjF.20.1185 662 VLEIEVR|SP 0.089 . LmjF.20.1185 676 VISQDDK|RC 0.058 . LmjF.20.1185 677 ISQDDKR|CQ 0.154 . LmjF.20.1185 686 VNALEYK|PV 0.084 . LmjF.20.1185 702 VEDGMYK|VV 0.065 . LmjF.20.1185 713 SSANGAR|PT 0.145 . LmjF.20.1185 718 ARPTSDK|WM 0.068 . LmjF.20.1185 725 WMFLQAR|DV 0.164 . LmjF.20.1185 732 DVSLIHK|LD 0.059 . LmjF.20.1185 737 HKLDAGK|YI 0.062 . LmjF.20.1185 743 KYIVVPR|IM 0.083 . LmjF.20.1185 764 LGMICDK|EV 0.087 . LmjF.20.1185 774 NGDVSVK|FK 0.059 . LmjF.20.1185 776 DVSVKFK|RL 0.103 . LmjF.20.1185 777 VSVKFKR|LD 0.161 . LmjF.20.1185 783 RLDAGNR|VF 0.075 . LmjF.20.1185 790 VFENFPK|FE 0.062 . LmjF.20.1185 806 QPVQYQK|RA 0.064 . LmjF.20.1185 807 PVQYQKR|AP 0.321 . ____________________________^_________________

  • Fasta :-

    >LmjF.20.1185 ATGTCGCACAACGGCACAGCAGGTGAGTGGCGAGAGCTCGGTGAAGAGCAGCCAACGCTA TCCTCCAAGCCCCAGGACGCAGCGATGAACACTTATGTCACCAAGGAGGCTGACGAGGGA GAGCGTGCCGAGTACTTAGCTCAGGAGCCCCACTCTCCTCAATATTACTTGGCGGGCAGC GAGGCTCAAGTAGTCCCGCAGCAGGCTTACGAGGAGGAGGCTCCCCAGAAGTACCCGGAA GAGACCGGCAATAACTATGACGCTCCGCAGCACGCGTACGAAGTGGTGGCCCCTGACAAC GCTCACGCCCCCTCGATGCCTGCGCCGCATGCTGCCGCTGCCGCTGCCGCTACGCCGCCG AGCGCGATCGTGAAGCCGCGGACGCGCAACGTGAAGAGCGTCGCTCGCTGGGAGGCGGTG GAGTATGACCTGCGTGACGGCAGCGACGATGAGTTCGAGCTGTCGACGTGCATGGCACCG GTATACGAGGGCGAGGGTAAGGAGGGCAACGAGGACGCGAGCGTGTTCAAGCACGGCGAG CCGGATTGCAAGGGGGAGATCTTGTCGTGCTTCGACGAGCCGAACTTGCTGTACCGGATC ATTGACCCGAAGGCGAAGACGTGGGCGTTTTACAACGACAGCCTGCAGTACGAGATGCAT GTGCAGTTCATATTTGGCAAGCACTCGAAGCTGCAGGCGCTGGAGAACACGACGCTGCGG CAGAACGAAGAGGGCCAATACGTGATGGAGGTGGTCGTGTACCCGACGGAGACTGAGATG TTTTTACAGGGCACTGCGAACGGGTTCACAAGCAAGCTGCGCGCTGTGCCACTGACGGAG GACTACCACAATGCGCGCCGCGGGATCACGGAGGAGCTGGTGAACAACGAGGTGGCTGCG ATCCAGCAGGTGACGAGCAGCGACAACGCGGAGGACGTGCTGCAGGCGTGCATCGACAGC GGGATCCCGTTCGTGGACCCCGAGTTCCCACCGTGCCAGGCGTCGCTGGAAGCTGGCGCG AGCAAGCCGTTCAAGCCGTTTGCGTGGGCGCGGCCGCAGGCGTGCGTGCCGGAGGAGATG GCGTCGCAGGTGCGACTGTTCCGCGCGAACGTGAGGCCCGGCTGCGTGGGCGCTGGCGAC CTCGGCGACTCGTGGGTGATTTGCTCTGTTGCATCGGTGTCGGAGGACCCTGCGCGGCTG ATGGGGATGTTCCGCCACCCGGAGGGCAAGGCTGCGGCACAGCGCGAGCACGCGGTCGGC GCGTACCGCGTGACGTTCAACAAAAATGGGTGGTGGCGCAGCGTGCTGGTGGACAGCTAC CTGCCTGTGTCCGGCGGCAAGCTGAAGTACGCGAAGAGCGCGACGGACCCGGCGGAGATC TGGCCTGCGATCCTGGAGAAGGCGTACGCGAAGCTGCACGGCAGCTACGCGAGGATCTGC TCCGGCGACCCGCTGCACGCGCTGCAGGACATGACCGGGTTCTCGACGATGCGCTTCGAC GATTCGCTGACGGACGACAAGGCGAGCGACCAGCTGTTCAGCGACCTTGTGCACGGGACT GCTGCAGGGTACACGGTGATCTGCAGCACGCCCGGGCGCGGGCCGCACGACAAAGACCAG GAGCTGTGCGAGGCGTACGCGCAGGTGGGGCTTGTGACCGGGTGTGCGTACACGATCCTG GAGGCGAAGCACATCGAGAGCAAGGACCTGCAGATGGTGAAGGTACGCAACGTGTGGGGG CGCGGCGTGGAGTGGAGCGGCAACTGGGGCAACGACGACGCAAAATGGGACGCGAACCCG GACATCGCGGAGGAATGCAACTTCCAGAAGGCGGAGAATGGGATGTTCTGGATGTCGTGG AAGGACGCGCGGAAGTACTTCAACGGTGGTGGCGTGTGCTTCACGCACCAGCCGGCGTAC GACTACCGCATGAACTGCGTGTTCACGGAAGGCGTGCCGTCCGCTGTGCTGGAGATCGAG GTGCGGTCGCCTACGTGCTTCACGTTTGTGATTTCACAGGACGACAAGCGGTGCCAGGTG AACGCGTTGGAGTACAAGCCTGTGATGATCAGCATTGCGGAGCCCGTGGAGGACGGCATG TACAAGGTCGTCATGAACTCCTCGGCGAACGGCGCGCGGCCGACGTCGGACAAGTGGATG TTTCTGCAGGCACGCGACGTTTCACTGATCCACAAGCTGGACGCTGGGAAGTACATTGTC GTGCCGCGCATCATGCCGTCGGATGACCCGGTGGAGCCTGTACCGTACGTTCTGGGGATG ATCTGCGACAAGGAGGTCGGCAACGGCGACGTGAGCGTGAAGTTCAAGCGCCTGGACGCT GGCAACCGCGTGTTCGAGAACTTCCCGAAGTTCGAGCCGGAGCTGATGGAGGTGGAGCAA CCGGTGCAGTACCAGAAGCGCGCGCCGGGCGAGGCATTCCCGATGACGCAGATGGGGGAG GAGGTGATGTAG
  • Download Fasta

  • Fasta :-

    MSHNGTAGEWRELGEEQPTLSSKPQDAAMNTYVTKEADEGERAEYLAQEPHSPQYYLAGS EAQVVPQQAYEEEAPQKYPEETGNNYDAPQHAYEVVAPDNAHAPSMPAPHAAAAAAATPP SAIVKPRTRNVKSVARWEAVEYDLRDGSDDEFELSTCMAPVYEGEGKEGNEDASVFKHGE PDCKGEILSCFDEPNLLYRIIDPKAKTWAFYNDSLQYEMHVQFIFGKHSKLQALENTTLR QNEEGQYVMEVVVYPTETEMFLQGTANGFTSKLRAVPLTEDYHNARRGITEELVNNEVAA IQQVTSSDNAEDVLQACIDSGIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEM ASQVRLFRANVRPGCVGAGDLGDSWVICSVASVSEDPARLMGMFRHPEGKAAAQREHAVG AYRVTFNKNGWWRSVLVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYARIC SGDPLHALQDMTGFSTMRFDDSLTDDKASDQLFSDLVHGTAAGYTVICSTPGRGPHDKDQ ELCEAYAQVGLVTGCAYTILEAKHIESKDLQMVKVRNVWGRGVEWSGNWGNDDAKWDANP DIAEECNFQKAENGMFWMSWKDARKYFNGGGVCFTHQPAYDYRMNCVFTEGVPSAVLEIE VRSPTCFTFVISQDDKRCQVNALEYKPVMISIAEPVEDGMYKVVMNSSANGARPTSDKWM FLQARDVSLIHKLDAGKYIVVPRIMPSDDPVEPVPYVLGMICDKEVGNGDVSVKFKRLDA GNRVFENFPKFEPELMEVEQPVQYQKRAPGEAFPMTQMGEEVM

  • title: catalytic site
  • coordinates: S384,C555,N577
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.20.1185392 SCSVASVSED0.993unspLmjF.20.1185392 SCSVASVSED0.993unspLmjF.20.1185392 SCSVASVSED0.993unspLmjF.20.1185502 SRFDDSLTDD0.996unspLmjF.20.1185619 SMFWMSWKDA0.997unspLmjF.20.1185716 SARPTSDKWM0.997unspLmjF.20.1185772 SNGDVSVKFK0.992unspLmjF.20.118521 SQPTLSSKPQ0.991unspLmjF.20.1185148 SLRDGSDDEF0.995unsp

LmjF.20.1185      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India