LmjF.20.1200 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.20.1200OTHER0.9999430.0000150.000043
No Results

  • Fasta :-

    >LmjF.20.1200 MFDEFREDSVEPLPMDASKSSPTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYN DTFVYEMHATFIFGPVSNMEPITASLSASESGGEVDERNRVVASVEDNELTISMVVYPME TIEFARGDKSKYRCHFDGKPLSKEYLQREIALANTELERNKMTLARFTHTSTDPEDVLAL CKKHRLVFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ RGELGNSWVVSAMAALAERPDYVKDMFRHPISSEETQRDEAVGAYRVWLNQDGLWRSVLV DSYLPVVGKQQRYARSANGPCEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTS RLDARFRECATDPVKSDMFFLRMVRDYENGHLVLLSTPGSGDPRSAHSTYKEKGIFVGYA YAVLEARAIESPTLRRKKVPPLRLLRLRNAWEAATKWSGKWSDDSSMWQAHPEACVAFPQ HSGKDGTFIMEWSEVLGIFVGCGVVFNHFGYTDYRIPFEFRGSVPDLCLEIHVTEPTTLT LILSQPDSKGTVRESEDYNPVMISIACASSAKTSPVSQSGSKRSSGTSSHSMMTASTQLV ARDYSLLVNSSADAEAPSKSFTFLQGRDVSAICTLVPEQSPYLVVPRLLVQQSSGSNGTR ASSAAVASASNSAVTWPCVLGVLSQLAFTPNGQAHVHLRKLPANSLVFDNYLSFANDSVE VAKTFYVKRSGTSVVERSASELQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/573 Sequence name : 573 Sequence length : 743 VALUES OF COMPUTED PARAMETERS Coef20 : 3.311 CoefTot : 0.000 ChDiff : -3 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.571 1.582 0.214 0.694 MesoH : 0.168 0.446 -0.163 0.286 MuHd_075 : 25.907 11.395 6.200 2.796 MuHd_095 : 30.879 19.300 8.268 4.669 MuHd_100 : 20.483 13.844 5.832 3.066 MuHd_105 : 17.514 7.036 3.773 1.977 Hmax_075 : 15.750 9.800 0.992 4.107 Hmax_095 : 5.600 10.500 -0.234 3.325 Hmax_100 : 4.800 5.400 -1.260 3.180 Hmax_105 : 5.400 3.500 -1.747 2.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9262 0.0738 DFMC : 0.9432 0.0568
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 743 LmjF.20.1200 MFDEFREDSVEPLPMDASKSSPTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYNDTFVYEMHATFIFGPVSNME 80 PITASLSASESGGEVDERNRVVASVEDNELTISMVVYPMETIEFARGDKSKYRCHFDGKPLSKEYLQREIALANTELERN 160 KMTLARFTHTSTDPEDVLALCKKHRLVFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ 240 RGELGNSWVVSAMAALAERPDYVKDMFRHPISSEETQRDEAVGAYRVWLNQDGLWRSVLVDSYLPVVGKQQRYARSANGP 320 CEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTSRLDARFRECATDPVKSDMFFLRMVRDYENGHLVLLSTPGS 400 GDPRSAHSTYKEKGIFVGYAYAVLEARAIESPTLRRKKVPPLRLLRLRNAWEAATKWSGKWSDDSSMWQAHPEACVAFPQ 480 HSGKDGTFIMEWSEVLGIFVGCGVVFNHFGYTDYRIPFEFRGSVPDLCLEIHVTEPTTLTLILSQPDSKGTVRESEDYNP 560 VMISIACASSAKTSPVSQSGSKRSSGTSSHSMMTASTQLVARDYSLLVNSSADAEAPSKSFTFLQGRDVSAICTLVPEQS 640 PYLVVPRLLVQQSSGSNGTRASSAAVASASNSAVTWPCVLGVLSQLAFTPNGQAHVHLRKLPANSLVFDNYLSFANDSVE 720 VAKTFYVKRSGTSVVERSASELQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..........................................................................P..... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................P......................................................... 640 ................................................................................ 720 ....................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LmjF.20.1200 6 -MFDEFR|ED 0.079 . LmjF.20.1200 19 LPMDASK|SS 0.081 . LmjF.20.1200 41 EATPCFK|GG 0.056 . LmjF.20.1200 47 KGGFLYR|II 0.109 . LmjF.20.1200 52 YRIIDSK|KK 0.063 . LmjF.20.1200 53 RIIDSKK|KV 0.138 . LmjF.20.1200 54 IIDSKKK|VW 0.089 . LmjF.20.1200 98 GGEVDER|NR 0.069 . LmjF.20.1200 100 EVDERNR|VV 0.096 . LmjF.20.1200 126 ETIEFAR|GD 0.093 . LmjF.20.1200 129 EFARGDK|SK 0.145 . LmjF.20.1200 131 ARGDKSK|YR 0.081 . LmjF.20.1200 133 GDKSKYR|CH 0.125 . LmjF.20.1200 139 RCHFDGK|PL 0.077 . LmjF.20.1200 143 DGKPLSK|EY 0.062 . LmjF.20.1200 148 SKEYLQR|EI 0.101 . LmjF.20.1200 159 ANTELER|NK 0.070 . LmjF.20.1200 161 TELERNK|MT 0.067 . LmjF.20.1200 166 NKMTLAR|FT 0.172 . LmjF.20.1200 182 DVLALCK|KH 0.053 . LmjF.20.1200 183 VLALCKK|HR 0.083 . LmjF.20.1200 185 ALCKKHR|LV 0.129 . LmjF.20.1200 204 HSLDGDR|GL 0.076 . LmjF.20.1200 213 IAPSGWR|RP 0.077 . LmjF.20.1200 214 APSGWRR|PE 0.126 . LmjF.20.1200 224 YLPLALK|GQ 0.058 . LmjF.20.1200 228 ALKGQIR|LF 0.082 . LmjF.20.1200 231 GQIRLFR|HR 0.174 . LmjF.20.1200 233 IRLFRHR|VT 0.083 . LmjF.20.1200 241 TPSATQR|GE 0.102 . LmjF.20.1200 259 MAALAER|PD 0.077 . LmjF.20.1200 264 ERPDYVK|DM 0.067 . LmjF.20.1200 268 YVKDMFR|HP 0.095 . LmjF.20.1200 278 SSEETQR|DE 0.096 . LmjF.20.1200 286 EAVGAYR|VW 0.075 . LmjF.20.1200 296 NQDGLWR|SV 0.105 . LmjF.20.1200 309 YLPVVGK|QQ 0.064 . LmjF.20.1200 312 VVGKQQR|YA 0.119 . LmjF.20.1200 315 KQQRYAR|SA 0.566 *ProP* LmjF.20.1200 330 WVSYLEK|VY 0.070 . LmjF.20.1200 334 LEKVYAK|RY 0.062 . LmjF.20.1200 335 EKVYAKR|YH 0.175 . LmjF.20.1200 352 DPLFAIR|DF 0.094 . LmjF.20.1200 361 TGFPTSR|LD 0.077 . LmjF.20.1200 365 TSRLDAR|FR 0.141 . LmjF.20.1200 367 RLDARFR|EC 0.078 . LmjF.20.1200 375 CATDPVK|SD 0.071 . LmjF.20.1200 382 SDMFFLR|MV 0.273 . LmjF.20.1200 385 FFLRMVR|DY 0.228 . LmjF.20.1200 404 PGSGDPR|SA 0.181 . LmjF.20.1200 411 SAHSTYK|EK 0.078 . LmjF.20.1200 413 HSTYKEK|GI 0.078 . LmjF.20.1200 427 YAVLEAR|AI 0.084 . LmjF.20.1200 435 IESPTLR|RK 0.071 . LmjF.20.1200 436 ESPTLRR|KK 0.092 . LmjF.20.1200 437 SPTLRRK|KV 0.097 . LmjF.20.1200 438 PTLRRKK|VP 0.127 . LmjF.20.1200 443 KKVPPLR|LL 0.077 . LmjF.20.1200 446 PPLRLLR|LR 0.158 . LmjF.20.1200 448 LRLLRLR|NA 0.102 . LmjF.20.1200 456 AWEAATK|WS 0.072 . LmjF.20.1200 460 ATKWSGK|WS 0.080 . LmjF.20.1200 484 FPQHSGK|DG 0.093 . LmjF.20.1200 515 FGYTDYR|IP 0.081 . LmjF.20.1200 521 RIPFEFR|GS 0.087 . LmjF.20.1200 549 LSQPDSK|GT 0.065 . LmjF.20.1200 553 DSKGTVR|ES 0.105 . LmjF.20.1200 572 ACASSAK|TS 0.067 . LmjF.20.1200 582 VSQSGSK|RS 0.058 . LmjF.20.1200 583 SQSGSKR|SS 0.681 *ProP* LmjF.20.1200 602 STQLVAR|DY 0.137 . LmjF.20.1200 619 DAEAPSK|SF 0.066 . LmjF.20.1200 627 FTFLQGR|DV 0.167 . LmjF.20.1200 647 PYLVVPR|LL 0.086 . LmjF.20.1200 660 SGSNGTR|AS 0.145 . LmjF.20.1200 699 QAHVHLR|KL 0.101 . LmjF.20.1200 700 AHVHLRK|LP 0.069 . LmjF.20.1200 723 DSVEVAK|TF 0.072 . LmjF.20.1200 728 AKTFYVK|RS 0.067 . LmjF.20.1200 729 KTFYVKR|SG 0.269 . LmjF.20.1200 737 GTSVVER|SA 0.299 . ____________________________^_________________

  • Fasta :-

    >LmjF.20.1200 ATGTTCGATGAGTTTCGTGAGGACTCAGTAGAGCCGCTACCAATGGATGCCAGTAAGAGC TCACCAACGCCATGGGTGAACTGGGGTCCGTCCATTGACGGCGAGGCTACGCCGTGCTTC AAGGGCGGTTTTCTCTATCGGATTATCGATTCCAAGAAGAAAGTCTGGGCTCTGTATAAC GATACGTTCGTCTACGAAATGCATGCCACCTTTATTTTCGGGCCTGTGTCGAACATGGAG CCCATCACCGCCTCGCTCTCTGCGTCGGAGAGCGGCGGCGAGGTGGATGAGAGGAACCGC GTCGTCGCCAGCGTCGAGGATAACGAGCTGACGATCTCCATGGTTGTCTATCCGATGGAG ACGATCGAGTTCGCCCGAGGCGACAAGTCGAAGTACAGATGTCACTTCGACGGCAAGCCG CTCTCAAAAGAGTACCTTCAACGCGAAATAGCCTTGGCAAACACCGAGCTAGAGAGGAAC AAGATGACGCTCGCGAGGTTCACCCACACCTCCACAGATCCTGAGGATGTGCTGGCGTTG TGCAAAAAACACCGTTTGGTGTTCATAGACCCCTCCTTCCCTCCTGGCCAGCACTCGCTT GACGGGGATCGAGGTCTGATTGCGCCAAGCGGGTGGAGGCGACCGGAGGCGTATCTGCCT CTCGCGTTGAAGGGTCAAATTCGTCTGTTTCGGCATCGTGTGACTCCCTCTGCCACACAG CGTGGCGAATTGGGCAATTCGTGGGTGGTGAGCGCCATGGCGGCGCTGGCGGAACGCCCG GACTACGTCAAGGATATGTTTCGGCACCCCATCAGCTCCGAAGAGACGCAGCGAGACGAG GCGGTTGGGGCGTACCGGGTTTGGCTGAACCAAGACGGTCTCTGGCGGTCGGTGCTCGTC GACAGCTATCTGCCCGTGGTGGGCAAGCAGCAGCGCTACGCCCGCAGCGCCAACGGGCCG TGCGAGATGTGGGTGTCTTATCTCGAGAAGGTGTATGCGAAGCGTTATCACAGCTACAGC AACATCGCCGGCGGCGATCCGCTCTTTGCAATTCGCGACTTCACCGGATTTCCTACGTCG CGGCTGGACGCTCGCTTTCGCGAGTGTGCCACGGACCCGGTGAAGAGCGATATGTTTTTC CTTCGCATGGTACGCGACTACGAGAACGGGCACCTTGTGCTACTGAGCACTCCCGGCAGC GGTGACCCGCGCTCTGCCCATAGCACATACAAGGAGAAGGGCATTTTTGTGGGCTACGCC TATGCAGTGCTAGAAGCTCGCGCGATCGAATCGCCGACATTGCGGCGGAAGAAGGTACCA CCGCTGCGGCTGCTGCGGCTGCGCAACGCGTGGGAGGCGGCGACCAAGTGGAGTGGCAAG TGGTCTGACGACTCGTCGATGTGGCAGGCGCACCCGGAAGCGTGTGTTGCGTTTCCGCAG CACAGCGGGAAGGATGGAACGTTCATCATGGAGTGGTCGGAGGTGCTGGGGATCTTTGTC GGCTGCGGTGTTGTGTTCAACCACTTCGGCTACACGGACTACCGCATCCCCTTCGAGTTC CGGGGCTCTGTGCCGGACCTGTGCCTCGAGATTCACGTGACAGAGCCGACAACGTTGACG CTCATACTGTCGCAGCCAGACAGCAAAGGCACGGTGAGGGAGTCGGAGGACTACAACCCT GTCATGATTTCCATAGCGTGCGCCTCCTCCGCCAAGACGAGCCCGGTTTCCCAGAGTGGC AGCAAGCGTAGCAGCGGGACCTCCAGTCACTCCATGATGACGGCCAGTACGCAGCTGGTG GCGCGTGATTACTCTCTCCTCGTCAATTCCTCTGCGGACGCCGAGGCGCCGTCAAAGAGC TTCACGTTCTTGCAGGGCCGCGACGTAAGCGCCATATGCACGCTCGTCCCAGAGCAGTCG CCGTACCTCGTCGTGCCACGTCTGCTCGTGCAGCAGTCTAGCGGCAGCAACGGCACGAGG GCGTCCAGTGCGGCTGTGGCCTCGGCATCAAACAGCGCTGTGACGTGGCCATGCGTGCTC GGTGTTCTTTCGCAGCTTGCCTTCACCCCAAACGGACAGGCACACGTTCATCTGCGCAAG TTGCCAGCGAACAGTCTCGTCTTCGACAACTACCTCAGCTTCGCCAACGACTCCGTGGAG GTCGCGAAGACCTTCTACGTGAAACGCTCCGGCACCAGTGTGGTGGAGCGCAGCGCCTCA GAACTACAGTAG
  • Download Fasta

  • Fasta :-

    MFDEFREDSVEPLPMDASKSSPTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYN DTFVYEMHATFIFGPVSNMEPITASLSASESGGEVDERNRVVASVEDNELTISMVVYPME TIEFARGDKSKYRCHFDGKPLSKEYLQREIALANTELERNKMTLARFTHTSTDPEDVLAL CKKHRLVFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ RGELGNSWVVSAMAALAERPDYVKDMFRHPISSEETQRDEAVGAYRVWLNQDGLWRSVLV DSYLPVVGKQQRYARSANGPCEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTS RLDARFRECATDPVKSDMFFLRMVRDYENGHLVLLSTPGSGDPRSAHSTYKEKGIFVGYA YAVLEARAIESPTLRRKKVPPLRLLRLRNAWEAATKWSGKWSDDSSMWQAHPEACVAFPQ HSGKDGTFIMEWSEVLGIFVGCGVVFNHFGYTDYRIPFEFRGSVPDLCLEIHVTEPTTLT LILSQPDSKGTVRESEDYNPVMISIACASSAKTSPVSQSGSKRSSGTSSHSMMTASTQLV ARDYSLLVNSSADAEAPSKSFTFLQGRDVSAICTLVPEQSPYLVVPRLLVQQSSGSNGTR ASSAAVASASNSAVTWPCVLGVLSQLAFTPNGQAHVHLRKLPANSLVFDNYLSFANDSVE VAKTFYVKRSGTSVVERSASELQ

  • title: catalytic site
  • coordinates: S247,Y419,N449
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.20.1200104 SRVVASVEDN0.997unspLmjF.20.1200104 SRVVASVEDN0.997unspLmjF.20.1200104 SRVVASVEDN0.997unspLmjF.20.1200272 SRHPISSEET0.996unspLmjF.20.1200338 SKRYHSYSNI0.996unspLmjF.20.1200360 SGFPTSRLDA0.994unspLmjF.20.1200408 SRSAHSTYKE0.994unspLmjF.20.1200482 SFPQHSGKDG0.997unspLmjF.20.1200523 SEFRGSVPDL0.995unspLmjF.20.1200574 SSAKTSPVSQ0.99unspLmjF.20.1200577 STSPVSQSGS0.995unspLmjF.20.1200585 SSKRSSGTSS0.997unspLmjF.20.12009 SFREDSVEPL0.992unspLmjF.20.120087 STASLSASES0.99unsp

LmjF.20.1200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India