LmjF.21.0840 | metallo-peptidase, Clan MG, Family M24

_IDPredictionOTHERSPmTPCS_Position
LmjF.21.0840OTHER0.9999980.0000000.000001
No Results

  • Fasta :-

    >LmjF.21.0840 MPPKISAKSKQQPKQQGGNKKGKGSNDDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRS SNGYGAAPVSRSLAADEPVVPSSANHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLTYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQAKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMQPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSFTAQYEHTIYLGPTAKEILSKGSDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/575 Sequence name : 575 Sequence length : 465 VALUES OF COMPUTED PARAMETERS Coef20 : 2.649 CoefTot : -2.961 ChDiff : -4 ZoneTo : 26 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 0.900 -0.108 0.470 MesoH : -0.771 0.222 -0.450 0.198 MuHd_075 : 21.937 10.699 7.757 4.925 MuHd_095 : 23.358 12.463 8.282 4.588 MuHd_100 : 21.780 7.960 7.037 3.765 MuHd_105 : 20.498 5.734 6.025 2.772 Hmax_075 : -6.300 -8.750 -3.600 -0.082 Hmax_095 : 0.800 -6.500 -4.368 0.910 Hmax_100 : 0.800 -4.200 -1.823 0.910 Hmax_105 : -8.900 -13.300 -5.334 -1.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8330 0.1670 DFMC : 0.5975 0.4025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 465 LmjF.21.0840 MPPKISAKSKQQPKQQGGNKKGKGSNDDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRSSNGYGAAPVSRSLAADEPVV 80 PSSANHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFPAGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAE 160 VHRQVRTWAQSWIKPGLSLMLMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLTYDDVMKVDFG 240 THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEVEINGKVHQVKSIRNLSGHNI 320 APYIIHSGKSVPIVKGGEQAKMEEGEVFAIETFGSTGRGFVNEDLECSHYMMQPGAEVMQLRSEKAQQLLKHIHKSYSTL 400 AFCRKWLDRDGFDRHLMNLNRLVDEGAVNKYPPLVDVKGSFTAQYEHTIYLGPTAKEILSKGSDY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.21.0840 4 ---MPPK|IS 0.067 . LmjF.21.0840 8 PPKISAK|SK 0.101 . LmjF.21.0840 10 KISAKSK|QQ 0.099 . LmjF.21.0840 14 KSKQQPK|QQ 0.078 . LmjF.21.0840 20 KQQGGNK|KG 0.060 . LmjF.21.0840 21 QQGGNKK|GK 0.141 . LmjF.21.0840 23 GGNKKGK|GS 0.104 . LmjF.21.0840 44 AAVNASK|AD 0.063 . LmjF.21.0840 49 SKADAAK|NH 0.072 . LmjF.21.0840 58 SNNHQGK|RS 0.095 . LmjF.21.0840 59 NNHQGKR|SS 0.425 . LmjF.21.0840 71 GAAPVSR|SL 0.193 . LmjF.21.0840 93 PENPYPK|TA 0.090 . LmjF.21.0840 100 TADGYPR|QT 0.124 . LmjF.21.0840 112 PTVPVSK|QF 0.067 . LmjF.21.0840 135 GEMNNFR|RS 0.109 . LmjF.21.0840 136 EMNNFRR|SS 0.424 . LmjF.21.0840 141 RRSSEEK|RA 0.074 . LmjF.21.0840 142 RSSEEKR|AL 0.248 . LmjF.21.0840 146 EKRALAR|AS 0.162 . LmjF.21.0840 156 QQVQEMR|EA 0.108 . LmjF.21.0840 163 EAAEVHR|QV 0.134 . LmjF.21.0840 166 EVHRQVR|TW 0.308 . LmjF.21.0840 174 WAQSWIK|PG 0.058 . LmjF.21.0840 185 LMLMTDR|IE 0.068 . LmjF.21.0840 188 MTDRIEK|KL 0.090 . LmjF.21.0840 189 TDRIEKK|LN 0.124 . LmjF.21.0840 196 LNELIGK|DG 0.065 . LmjF.21.0840 201 GKDGILR|GQ 0.069 . LmjF.21.0840 226 PNTGDEK|VV 0.063 . LmjF.21.0840 236 TYDDVMK|VD 0.059 . LmjF.21.0840 246 GTHINGR|II 0.115 . LmjF.21.0840 268 PLLQAVK|EA 0.059 . LmjF.21.0840 276 ATYEGIK|QA 0.064 . LmjF.21.0840 283 QAGIDVR|LG 0.092 . LmjF.21.0840 305 EVEINGK|VH 0.052 . LmjF.21.0840 310 GKVHQVK|SI 0.097 . LmjF.21.0840 313 HQVKSIR|NL 0.104 . LmjF.21.0840 329 YIIHSGK|SV 0.127 . LmjF.21.0840 335 KSVPIVK|GG 0.074 . LmjF.21.0840 341 KGGEQAK|ME 0.079 . LmjF.21.0840 358 TFGSTGR|GF 0.082 . LmjF.21.0840 382 AEVMQLR|SE 0.137 . LmjF.21.0840 385 MQLRSEK|AQ 0.100 . LmjF.21.0840 391 KAQQLLK|HI 0.073 . LmjF.21.0840 395 LLKHIHK|SY 0.088 . LmjF.21.0840 404 STLAFCR|KW 0.076 . LmjF.21.0840 405 TLAFCRK|WL 0.106 . LmjF.21.0840 409 CRKWLDR|DG 0.116 . LmjF.21.0840 414 DRDGFDR|HL 0.095 . LmjF.21.0840 421 HLMNLNR|LV 0.141 . LmjF.21.0840 430 DEGAVNK|YP 0.057 . LmjF.21.0840 438 PPLVDVK|GS 0.069 . LmjF.21.0840 456 YLGPTAK|EI 0.066 . LmjF.21.0840 461 AKEILSK|GS 0.076 . ____________________________^_________________

  • Fasta :-

    >LmjF.21.0840 ATGCCACCAAAGATTTCTGCGAAAAGCAAGCAGCAGCCCAAGCAGCAGGGCGGCAACAAG AAGGGCAAGGGCAGCAACGATGACGGCGACGACTTTGACGCGATGCTGGCGGCAGCCGTG AACGCGTCCAAGGCGGACGCAGCCAAAAACCACAGTAATAATCATCAGGGCAAGCGCAGC AGCAACGGGTATGGTGCGGCACCGGTCAGTAGGAGCCTCGCCGCGGACGAGCCAGTGGTG CCGAGCTCGGCCAATCACCCGGAGAATCCCTACCCGAAGACGGCGGATGGCTACCCGCGG CAGACGTGGCCGGAGCCGACGGTGCCGGTGTCGAAGCAGTTTGCTGCTGGCCAGTTTCCG GCCGGCGAGATCGTCGACCACCCTGGTGAGATGAACAACTTCCGACGCAGCAGTGAGGAA AAGCGGGCGTTGGCCCGCGCGAGTGAGCAGCAGGTGCAGGAGATGCGCGAGGCGGCCGAG GTGCACCGCCAGGTCCGCACCTGGGCGCAGAGCTGGATCAAGCCAGGCCTATCGCTGATG CTCATGACCGATCGCATCGAGAAGAAGCTGAATGAGCTGATTGGCAAGGACGGCATCCTT CGGGGACAGGCCTTCCCGACGGGATGCTCGCTGAACCACGTCGCAGCGCACTACACACCC AACACCGGTGACGAAAAAGTTGTTTTGACGTACGATGACGTCATGAAGGTAGACTTCGGC ACCCACATCAATGGCCGCATCATCGACTGCGCCTGGACGGTCGCCTTCAACCCGATGTTC GACCCGCTGCTGCAAGCCGTGAAAGAGGCGACGTACGAGGGCATCAAGCAGGCGGGCATT GACGTCCGTCTCGGCGACATCGGCGCCGCCATCGAGGAAGTGATGGAGTCGCACGAGGTG GAGATCAACGGCAAGGTGCACCAGGTAAAGAGCATCCGCAACTTGTCCGGCCACAACATT GCCCCCTACATCATCCATAGCGGCAAGAGTGTGCCCATCGTGAAGGGCGGCGAGCAGGCG AAGATGGAGGAGGGGGAGGTGTTTGCCATCGAGACCTTCGGCTCCACTGGACGCGGCTTC GTGAACGAGGATTTGGAGTGCTCTCATTACATGATGCAACCCGGCGCGGAGGTGATGCAG CTGCGCTCGGAGAAGGCGCAGCAGCTGCTGAAGCACATCCACAAGTCGTACAGCACGTTA GCGTTCTGCCGCAAATGGCTCGACCGCGACGGCTTCGATCGTCACCTCATGAACCTGAAC CGCCTGGTCGATGAGGGCGCCGTGAACAAGTACCCGCCGCTGGTGGACGTCAAGGGCAGC TTTACAGCTCAATATGAGCACACCATCTACCTCGGCCCAACCGCGAAGGAGATTCTGTCC AAGGGAAGCGACTACTAG
  • Download Fasta

  • Fasta :-

    MPPKISAKSKQQPKQQGGNKKGKGSNDDGDDFDAMLAAAVNASKADAAKNHSNNHQGKRS SNGYGAAPVSRSLAADEPVVPSSANHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNHVAAHYTPNTGDEKVVLTYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQAKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMQPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSFTAQYEHTIYLGPTAKEILSKGSDY

  • title: active site
  • coordinates: H217,D238,D249,H318,E351,E446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.21.0840138 SFRRSSEEKR0.995unspLmjF.21.0840138 SFRRSSEEKR0.995unspLmjF.21.0840138 SFRRSSEEKR0.995unspLmjF.21.084025 SKGKGSNDDG0.996unspLmjF.21.0840137 SNFRRSSEEK0.998unsp

LmjF.21.0840      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India