LmjF.25.1480 | calpain family cysteine protease-like protein

_IDPredictionOTHERSPmTPCS_Position
LmjF.25.1480OTHER0.9999540.0000150.000032
No Results

  • Fasta :-

    >LmjF.25.1480 MGNGCCGCCDAKPDYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTAD FGNGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVQTKEVNGFNVKYSGIAFTDAD RQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVARGKGKMYVDTSFPPTSQSLIR SGIDSDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA ALAEHDAAIKGIFKNHHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPTVQLLPVFA RNRNHPNELWVSFAEKAYAKVFGSYQAIVAGYPWQALEDLTGFPAYNFGNMWRTAQTDTE TRKKLFDSLHRWNKKYLICIATPSNGALKMAGKQLSANQWEALFEKAGLRIGHAYSVLDV RHFPLHRLCMLKIRNPWGSHVEWSGDWGDDSPLWNRYPFIKLACRPEKKADGIFWMEWRD VSKFFDSGSVCFRRGHWFRSWYDYRVLGSFEDLVCDTALLIIVNKTSQFPAYISLHQKDC RGLATSDPDSKYACVMISISEGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKF TKGHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSEDVVVNIVRLDKNNAVFKNVAS FDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/316 Sequence name : 316 Sequence length : 705 VALUES OF COMPUTED PARAMETERS Coef20 : 2.844 CoefTot : -0.884 ChDiff : 30 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.606 0.077 0.591 MesoH : -0.572 0.120 -0.418 0.223 MuHd_075 : 2.384 2.525 3.395 0.372 MuHd_095 : 9.015 9.825 4.206 1.016 MuHd_100 : 10.657 6.139 3.471 1.546 MuHd_105 : 16.887 8.137 5.335 3.532 Hmax_075 : 3.800 4.550 2.116 1.980 Hmax_095 : 3.675 6.738 3.135 2.021 Hmax_100 : 9.300 5.400 2.754 3.250 Hmax_105 : 1.600 3.800 2.332 2.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9942 0.0058 DFMC : 0.9947 0.0053
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 705 LmjF.25.1480 MGNGCCGCCDAKPDYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTADFGNGSNIVAMSDTELVRKND 80 SGACTATVSVFPLETKAMVQTKEVNGFNVKYSGIAFTDADRQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVAR 160 GKGKMYVDTSFPPTSQSLIRSGIDSDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA 240 ALAEHDAAIKGIFKNHHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPTVQLLPVFARNRNHPNELWVSFAEKAYAK 320 VFGSYQAIVAGYPWQALEDLTGFPAYNFGNMWRTAQTDTETRKKLFDSLHRWNKKYLICIATPSNGALKMAGKQLSANQW 400 EALFEKAGLRIGHAYSVLDVRHFPLHRLCMLKIRNPWGSHVEWSGDWGDDSPLWNRYPFIKLACRPEKKADGIFWMEWRD 480 VSKFFDSGSVCFRRGHWFRSWYDYRVLGSFEDLVCDTALLIIVNKTSQFPAYISLHQKDCRGLATSDPDSKYACVMISIS 560 EGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKFTKGHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSED 640 VVVNIVRLDKNNAVFKNVASFDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.25.1480 12 CGCCDAK|PD 0.062 . LmjF.25.1480 16 DAKPDYK|LG 0.058 . LmjF.25.1480 19 PDYKLGR|PL 0.108 . LmjF.25.1480 25 RPLVSGK|TT 0.064 . LmjF.25.1480 34 PCFNDGR|LF 0.078 . LmjF.25.1480 37 NDGRLFK|IV 0.198 . LmjF.25.1480 40 RLFKIVK|GD 0.063 . LmjF.25.1480 56 TQDYQMK|VT 0.077 . LmjF.25.1480 77 SDTELVR|KN 0.084 . LmjF.25.1480 78 DTELVRK|ND 0.077 . LmjF.25.1480 96 VFPLETK|AM 0.054 . LmjF.25.1480 102 KAMVQTK|EV 0.087 . LmjF.25.1480 110 VNGFNVK|YS 0.077 . LmjF.25.1480 121 AFTDADR|QK 0.064 . LmjF.25.1480 123 TDADRQK|LR 0.070 . LmjF.25.1480 125 ADRQKLR|QK 0.123 . LmjF.25.1480 127 RQKLRQK|AA 0.075 . LmjF.25.1480 140 ADLAEMR|KL 0.082 . LmjF.25.1480 141 DLAEMRK|LR 0.070 . LmjF.25.1480 143 AEMRKLR|ER 0.244 . LmjF.25.1480 145 MRKLRER|NP 0.080 . LmjF.25.1480 148 LRERNPK|VN 0.153 . LmjF.25.1480 154 KVNNQNR|LL 0.105 . LmjF.25.1480 157 NQNRLLK|VA 0.184 . LmjF.25.1480 160 RLLKVAR|GK 0.147 . LmjF.25.1480 162 LKVARGK|GK 0.076 . LmjF.25.1480 164 VARGKGK|MY 0.066 . LmjF.25.1480 180 TSQSLIR|SG 0.186 . LmjF.25.1480 192 DPDACLK|RP 0.056 . LmjF.25.1480 193 PDACLKR|PE 0.147 . LmjF.25.1480 200 PETIAWR|RP 0.074 . LmjF.25.1480 201 ETIAWRR|PE 0.098 . LmjF.25.1480 208 PEDFLPK|KW 0.067 . LmjF.25.1480 209 EDFLPKK|WH 0.086 . LmjF.25.1480 213 PKKWHPK|IR 0.064 . LmjF.25.1480 215 KWHPKIR|LF 0.139 . LmjF.25.1480 223 FGNISPK|DI 0.125 . LmjF.25.1480 250 EHDAAIK|GI 0.066 . LmjF.25.1480 254 AIKGIFK|NH 0.055 . LmjF.25.1480 262 HHGCCIR|SQ 0.133 . LmjF.25.1480 266 CIRSQER|KH 0.091 . LmjF.25.1480 267 IRSQERK|HG 0.098 . LmjF.25.1480 272 RKHGAWR|VN 0.085 . LmjF.25.1480 282 NISGWWR|TI 0.089 . LmjF.25.1480 301 LLPVFAR|NR 0.078 . LmjF.25.1480 303 PVFARNR|NH 0.073 . LmjF.25.1480 316 WVSFAEK|AY 0.083 . LmjF.25.1480 320 AEKAYAK|VF 0.070 . LmjF.25.1480 353 NFGNMWR|TA 0.100 . LmjF.25.1480 362 QTDTETR|KK 0.059 . LmjF.25.1480 363 TDTETRK|KL 0.104 . LmjF.25.1480 364 DTETRKK|LF 0.081 . LmjF.25.1480 371 LFDSLHR|WN 0.081 . LmjF.25.1480 374 SLHRWNK|KY 0.143 . LmjF.25.1480 375 LHRWNKK|YL 0.120 . LmjF.25.1480 389 PSNGALK|MA 0.109 . LmjF.25.1480 393 ALKMAGK|QL 0.076 . LmjF.25.1480 406 WEALFEK|AG 0.065 . LmjF.25.1480 410 FEKAGLR|IG 0.069 . LmjF.25.1480 421 YSVLDVR|HF 0.074 . LmjF.25.1480 427 RHFPLHR|LC 0.077 . LmjF.25.1480 432 HRLCMLK|IR 0.068 . LmjF.25.1480 434 LCMLKIR|NP 0.088 . LmjF.25.1480 456 DSPLWNR|YP 0.082 . LmjF.25.1480 461 NRYPFIK|LA 0.077 . LmjF.25.1480 465 FIKLACR|PE 0.076 . LmjF.25.1480 468 LACRPEK|KA 0.245 . LmjF.25.1480 469 ACRPEKK|AD 0.111 . LmjF.25.1480 479 IFWMEWR|DV 0.228 . LmjF.25.1480 483 EWRDVSK|FF 0.080 . LmjF.25.1480 493 SGSVCFR|RG 0.101 . LmjF.25.1480 494 GSVCFRR|GH 0.115 . LmjF.25.1480 499 RRGHWFR|SW 0.325 . LmjF.25.1480 505 RSWYDYR|VL 0.116 . LmjF.25.1480 525 LLIIVNK|TS 0.055 . LmjF.25.1480 538 YISLHQK|DC 0.077 . LmjF.25.1480 541 LHQKDCR|GL 0.119 . LmjF.25.1480 551 TSDPDSK|YA 0.074 . LmjF.25.1480 570 INGSQQK|VV 0.070 . LmjF.25.1480 592 YLFQESR|SV 0.151 . LmjF.25.1480 599 SVSLYYK|FT 0.072 . LmjF.25.1480 602 LYYKFTK|GH 0.061 . LmjF.25.1480 605 KFTKGHK|YL 0.059 . LmjF.25.1480 611 KYLVIPR|RM 0.069 . LmjF.25.1480 612 YLVIPRR|MK 0.176 . LmjF.25.1480 614 VIPRRMK|SS 0.166 . LmjF.25.1480 623 TGNNVPK|KK 0.074 . LmjF.25.1480 624 GNNVPKK|KY 0.162 . LmjF.25.1480 625 NNVPKKK|YV 0.246 . LmjF.25.1480 631 KYVIALR|TQ 0.071 . LmjF.25.1480 635 ALRTQTK|VS 0.065 . LmjF.25.1480 647 VVVNIVR|LD 0.065 . LmjF.25.1480 650 NIVRLDK|NN 0.088 . LmjF.25.1480 656 KNNAVFK|NV 0.083 . LmjF.25.1480 676 NTLYQIK|DG 0.070 . LmjF.25.1480 683 DGNNVFR|TY 0.090 . LmjF.25.1480 686 NVFRTYR|SD 0.189 . LmjF.25.1480 691 YRSDNLR|KG 0.108 . LmjF.25.1480 692 RSDNLRK|GK 0.093 . LmjF.25.1480 694 DNLRKGK|KQ 0.149 . LmjF.25.1480 695 NLRKGKK|QH 0.103 . ____________________________^_________________

  • Fasta :-

    >LmjF.25.1480 ATGGGCAACGGTTGCTGCGGCTGCTGTGACGCGAAGCCGGATTACAAGCTCGGCAGGCCT CTTGTCTCGGGCAAAACCACCCCGTGCTTCAATGATGGCCGCCTCTTCAAGATCGTCAAG GGCGATATCTGGTACTTCTACAACGACACGCAGGACTATCAGATGAAGGTGACAGCCGAC TTCGGCAATGGCTCGAACATCGTCGCGATGAGCGACACAGAACTCGTGCGCAAGAATGAC TCCGGCGCCTGCACCGCAACCGTCTCTGTGTTCCCGCTCGAGACCAAGGCCATGGTGCAA ACCAAGGAGGTGAACGGCTTCAACGTAAAGTACTCCGGCATCGCCTTCACCGATGCGGAC CGACAGAAGCTGCGTCAGAAAGCCGCGGCCCAGGTCAGCGCCGACCTCGCCGAGATGCGC AAGCTGCGCGAGAGAAACCCGAAGGTCAACAACCAAAATCGGCTCCTGAAGGTGGCACGG GGAAAGGGCAAGATGTACGTTGACACGTCCTTTCCGCCCACCTCGCAGTCGCTGATCCGC TCTGGCATCGACTCGGACCCGGATGCGTGCCTGAAGCGGCCGGAGACGATCGCATGGCGT CGCCCCGAAGACTTTCTGCCGAAGAAGTGGCACCCGAAAATTCGTCTCTTCGGCAACATC TCGCCCAAGGACATTAGCCAGGGTCAGCTCGGGGATTGCTACTACCTCTGCGCGCTTGCG GCGCTGGCCGAGCACGATGCCGCCATCAAGGGCATTTTTAAGAACCACCACGGCTGCTGC ATCCGCAGCCAGGAGCGAAAGCATGGTGCGTGGCGCGTGAACCTGAACATCAGCGGGTGG TGGCGTACCATCATCATCGACTCGTACTTGCCCACCGTGCAGCTGTTGCCGGTGTTCGCG CGCAACCGCAACCACCCGAACGAGCTGTGGGTATCCTTTGCAGAGAAGGCCTACGCGAAG GTCTTCGGTTCGTACCAGGCGATCGTGGCTGGATACCCGTGGCAAGCCCTCGAGGATCTC ACCGGCTTTCCGGCCTACAACTTTGGCAACATGTGGAGGACAGCGCAGACGGACACCGAG ACACGGAAGAAGCTCTTCGATTCCCTCCACCGGTGGAACAAGAAGTACCTGATCTGCATT GCCACCCCGTCAAACGGCGCCCTGAAGATGGCTGGTAAGCAGCTCTCAGCAAACCAGTGG GAGGCGCTGTTTGAGAAGGCCGGCCTGAGAATCGGCCACGCGTACTCGGTGCTGGACGTG AGACACTTCCCACTGCACCGGCTGTGCATGCTGAAGATCCGCAACCCTTGGGGGTCGCAT GTGGAGTGGAGCGGGGACTGGGGCGATGACAGTCCGCTGTGGAACCGCTACCCATTCATC AAGCTCGCCTGCCGTCCTGAGAAGAAGGCGGATGGCATCTTCTGGATGGAGTGGCGCGAT GTGTCTAAGTTCTTCGACAGCGGCTCCGTGTGCTTCCGCCGTGGCCACTGGTTCCGTTCG TGGTATGACTACCGCGTCCTTGGCAGCTTTGAGGACCTTGTGTGCGACACCGCGCTGCTG ATCATCGTGAACAAGACGTCGCAGTTTCCGGCGTACATCTCGCTGCACCAGAAGGACTGC CGCGGGCTGGCGACCAGCGACCCGGACAGCAAGTACGCTTGCGTGATGATCAGCATTTCC GAGGGCGACATCAACGGCTCGCAGCAGAAGGTGGTAGCAAACTCCAGCGAGAACCCGGAG GAGCCGAGCACCGAATACCTCTTCCAGGAGTCTCGCTCTGTCTCCCTCTACTATAAGTTC ACAAAGGGCCACAAGTACCTCGTCATTCCGCGTCGCATGAAAAGCAGCACTGGCAACAAC GTCCCAAAGAAGAAGTACGTCATCGCGCTACGCACGCAGACCAAGGTGTCCAGCGAGGAC GTCGTCGTGAACATTGTGCGCCTTGACAAGAACAACGCGGTGTTCAAAAACGTGGCCTCG TTTGACGCTGGCACACCCACGAGCCTCAACACGCTGTACCAGATCAAGGACGGCAACAAC GTCTTTCGCACCTACCGCAGCGACAACTTGCGCAAGGGCAAGAAGCAGCACAACGCGGAG TTCGAGCTGGTGATGTGA
  • Download Fasta

  • Fasta :-

    MGNGCCGCCDAKPDYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTAD FGNGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVQTKEVNGFNVKYSGIAFTDAD RQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVARGKGKMYVDTSFPPTSQSLIR SGIDSDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA ALAEHDAAIKGIFKNHHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPTVQLLPVFA RNRNHPNELWVSFAEKAYAKVFGSYQAIVAGYPWQALEDLTGFPAYNFGNMWRTAQTDTE TRKKLFDSLHRWNKKYLICIATPSNGALKMAGKQLSANQWEALFEKAGLRIGHAYSVLDV RHFPLHRLCMLKIRNPWGSHVEWSGDWGDDSPLWNRYPFIKLACRPEKKADGIFWMEWRD VSKFFDSGSVCFRRGHWFRSWYDYRVLGSFEDLVCDTALLIIVNKTSQFPAYISLHQKDC RGLATSDPDSKYACVMISISEGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKF TKGHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSEDVVVNIVRLDKNNAVFKNVAS FDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM

  • title: catalytic site
  • coordinates: C233,H413,N435
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.25.1480546 SGLATSDPDS0.995unspLmjF.25.1480546 SGLATSDPDS0.995unspLmjF.25.1480546 SGLATSDPDS0.995unspLmjF.25.1480575 SVVANSSENP0.995unspLmjF.25.1480637 SQTKVSSEDV0.997unspLmjF.25.1480185 SSGIDSDPDA0.993unspLmjF.25.1480221 SFGNISPKDI0.994unsp

LmjF.25.1480      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India