LmjF.25.2380 | glutathionylspermidine synthase, putative

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LmjF.25.2380OTHER0.9995990.0001490.000251
No Results

  • Fasta :-

    >LmjF.25.2380 MLSLPRDHHYHAHHSGTEFVPFDQVIGITPDGVPVISNGNEFHFSNLESVTPSYQALCSS VRKAPVIVPCTKLGAKWQCVEFARRYLASRKAVWTASMPIAADMLRAEPPFVHVQDSTPV EFTRTPNRSHGPAPAMSDIIVWDQSEETPLGHVAVVTEVLPEAVRVAEQNQGFERWPQGM LYSREISMQRSSAGTVELVDEDSVLGWVTLQCPYYDFRDGDLADKFRIATGPGCIVRQPF PKHVELPWVQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFFFYFLDY*HLVPARAC GSLAAPALPWLPQLGSSTTRARRISWSTNLGYPSPPLPPEIHPLRRRSWEMCRQISDRFD FGYDGNKVTVLEYNCDSSGALLECCNTQEMANDYGMSQGISTGSFLGAKCVSHLVRLTSN EKVSPKHKLTHFMIDDDDEERYTAMCMMSFAEKAGFLTKLCVKLIDFRYRDGTPAHAAPL SAPCDHPIMFDSDGDEVLMVWKTWSWDTVLRQHHRQRSAADSVSGPALADILLNNNIRVI EPLWKAVTGSKTILPFMRALAPDRESLLAADFVPTKDIISHHYISKPING*AGQNIMMFD PVTDAAEPNVAPQGMLSKSSSQLFPIKSLAASCSALQSQSIDRTNECSAGTFFDSAVVYQ KRFFEEIKASTSPFLCDWMINDEFGGIVVREGASKITKLDRNVIPARVVRENVSLGRAYA DEGET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/667 Sequence name : 667 Sequence length : 725 VALUES OF COMPUTED PARAMETERS Coef20 : 3.017 CoefTot : 0.238 ChDiff : -18 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.141 1.118 0.090 0.535 MesoH : -0.299 0.258 -0.313 0.199 MuHd_075 : 3.705 4.890 3.396 0.363 MuHd_095 : 27.981 12.876 6.255 4.886 MuHd_100 : 23.243 12.002 5.360 4.321 MuHd_105 : 13.066 7.935 3.498 2.916 Hmax_075 : -3.383 -3.000 -3.644 0.670 Hmax_095 : 6.200 1.500 -1.573 2.380 Hmax_100 : 6.200 1.500 -1.573 2.380 Hmax_105 : 3.267 -0.467 -1.994 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9705 0.0295 DFMC : 0.9493 0.0507
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 725 LmjF.25.2380 MLSLPRDHHYHAHHSGTEFVPFDQVIGITPDGVPVISNGNEFHFSNLESVTPSYQALCSSVRKAPVIVPCTKLGAKWQCV 80 EFARRYLASRKAVWTASMPIAADMLRAEPPFVHVQDSTPVEFTRTPNRSHGPAPAMSDIIVWDQSEETPLGHVAVVTEVL 160 PEAVRVAEQNQGFERWPQGMLYSREISMQRSSAGTVELVDEDSVLGWVTLQCPYYDFRDGDLADKFRIATGPGCIVRQPF 240 PKHVELPWVQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFFFYFLDYXHLVPARACGSLAAPALPWLPQLGSSTTR 320 ARRISWSTNLGYPSPPLPPEIHPLRRRSWEMCRQISDRFDFGYDGNKVTVLEYNCDSSGALLECCNTQEMANDYGMSQGI 400 STGSFLGAKCVSHLVRLTSNEKVSPKHKLTHFMIDDDDEERYTAMCMMSFAEKAGFLTKLCVKLIDFRYRDGTPAHAAPL 480 SAPCDHPIMFDSDGDEVLMVWKTWSWDTVLRQHHRQRSAADSVSGPALADILLNNNIRVIEPLWKAVTGSKTILPFMRAL 560 APDRESLLAADFVPTKDIISHHYISKPINGXAGQNIMMFDPVTDAAEPNVAPQGMLSKSSSQLFPIKSLAASCSALQSQS 640 IDRTNECSAGTFFDSAVVYQKRFFEEIKASTSPFLCDWMINDEFGGIVVREGASKITKLDRNVIPARVVRENVSLGRAYA 720 DEGET 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.25.2380 6 -MLSLPR|DH 0.087 . LmjF.25.2380 62 ALCSSVR|KA 0.093 . LmjF.25.2380 63 LCSSVRK|AP 0.095 . LmjF.25.2380 72 VIVPCTK|LG 0.059 . LmjF.25.2380 76 CTKLGAK|WQ 0.059 . LmjF.25.2380 84 QCVEFAR|RY 0.092 . LmjF.25.2380 85 CVEFARR|YL 0.102 . LmjF.25.2380 90 RRYLASR|KA 0.094 . LmjF.25.2380 91 RYLASRK|AV 0.105 . LmjF.25.2380 106 IAADMLR|AE 0.081 . LmjF.25.2380 124 TPVEFTR|TP 0.090 . LmjF.25.2380 128 FTRTPNR|SH 0.189 . LmjF.25.2380 165 VLPEAVR|VA 0.087 . LmjF.25.2380 175 QNQGFER|WP 0.100 . LmjF.25.2380 184 QGMLYSR|EI 0.108 . LmjF.25.2380 190 REISMQR|SS 0.101 . LmjF.25.2380 218 CPYYDFR|DG 0.095 . LmjF.25.2380 225 DGDLADK|FR 0.059 . LmjF.25.2380 227 DLADKFR|IA 0.117 . LmjF.25.2380 237 GPGCIVR|QP 0.099 . LmjF.25.2380 242 VRQPFPK|HV 0.099 . LmjF.25.2380 254 WVQPEER|CD 0.079 . LmjF.25.2380 260 RCDFYLK|RS 0.064 . LmjF.25.2380 261 CDFYLKR|SL 0.346 . LmjF.25.2380 274 NVGDDAR|AE 0.086 . LmjF.25.2380 298 XHLVPAR|AC 0.093 . LmjF.25.2380 320 LGSSTTR|AR 0.107 . LmjF.25.2380 322 SSTTRAR|RI 0.117 . LmjF.25.2380 323 STTRARR|IS 0.278 . LmjF.25.2380 345 PEIHPLR|RR 0.083 . LmjF.25.2380 346 EIHPLRR|RS 0.140 . LmjF.25.2380 347 IHPLRRR|SW 0.282 . LmjF.25.2380 353 RSWEMCR|QI 0.122 . LmjF.25.2380 358 CRQISDR|FD 0.133 . LmjF.25.2380 367 FGYDGNK|VT 0.052 . LmjF.25.2380 409 GSFLGAK|CV 0.080 . LmjF.25.2380 416 CVSHLVR|LT 0.124 . LmjF.25.2380 422 RLTSNEK|VS 0.053 . LmjF.25.2380 426 NEKVSPK|HK 0.069 . LmjF.25.2380 428 KVSPKHK|LT 0.076 . LmjF.25.2380 441 DDDDEER|YT 0.085 . LmjF.25.2380 453 MMSFAEK|AG 0.062 . LmjF.25.2380 459 KAGFLTK|LC 0.059 . LmjF.25.2380 463 LTKLCVK|LI 0.059 . LmjF.25.2380 468 VKLIDFR|YR 0.077 . LmjF.25.2380 470 LIDFRYR|DG 0.115 . LmjF.25.2380 502 EVLMVWK|TW 0.060 . LmjF.25.2380 511 SWDTVLR|QH 0.101 . LmjF.25.2380 515 VLRQHHR|QR 0.109 . LmjF.25.2380 517 RQHHRQR|SA 0.285 . LmjF.25.2380 538 LLNNNIR|VI 0.101 . LmjF.25.2380 545 VIEPLWK|AV 0.073 . LmjF.25.2380 551 KAVTGSK|TI 0.060 . LmjF.25.2380 558 TILPFMR|AL 0.108 . LmjF.25.2380 564 RALAPDR|ES 0.073 . LmjF.25.2380 576 ADFVPTK|DI 0.071 . LmjF.25.2380 586 SHHYISK|PI 0.076 . LmjF.25.2380 618 PQGMLSK|SS 0.092 . LmjF.25.2380 627 SQLFPIK|SL 0.086 . LmjF.25.2380 643 QSQSIDR|TN 0.106 . LmjF.25.2380 661 SAVVYQK|RF 0.066 . LmjF.25.2380 662 AVVYQKR|FF 0.253 . LmjF.25.2380 668 RFFEEIK|AS 0.057 . LmjF.25.2380 690 FGGIVVR|EG 0.073 . LmjF.25.2380 695 VREGASK|IT 0.063 . LmjF.25.2380 698 GASKITK|LD 0.071 . LmjF.25.2380 701 KITKLDR|NV 0.133 . LmjF.25.2380 707 RNVIPAR|VV 0.127 . LmjF.25.2380 710 IPARVVR|EN 0.293 . LmjF.25.2380 717 ENVSLGR|AY 0.101 . ____________________________^_________________

  • Fasta :-

    >LmjF.25.2380 ATGCTGTCTCTGCCACGCGACCACCACTACCACGCGCACCACAGCGGCACTGAGTTCGTG CCCTTTGACCAGGTCATCGGCATCACCCCAGATGGCGTGCCCGTCATATCCAACGGGAAT GAGTTCCACTTCAGCAACCTCGAGTCTGTGACACCGTCCTATCAGGCGCTCTGCTCCTCC GTCCGCAAGGCGCCGGTGATTGTGCCGTGCACGAAGCTTGGTGCCAAATGGCAGTGCGTT GAGTTTGCACGCCGCTACCTCGCGTCCCGCAAGGCTGTGTGGACGGCGTCCATGCCGATC GCCGCGGATATGTTGAGAGCAGAGCCGCCGTTTGTGCACGTGCAGGATAGCACACCGGTG GAGTTCACGCGGACCCCCAACAGATCACACGGCCCGGCGCCGGCGATGTCGGACATCATC GTGTGGGATCAGAGCGAGGAGACGCCGCTTGGCCACGTCGCGGTTGTGACGGAGGTGCTG CCGGAGGCGGTGCGAGTTGCGGAGCAGAACCAGGGCTTTGAGCGGTGGCCGCAGGGCATG CTGTACAGCCGGGAGATTTCAATGCAGCGCAGCAGCGCAGGCACAGTAGAGCTCGTAGAC GAGGACTCGGTGCTGGGGTGGGTGACGCTGCAGTGCCCCTACTACGACTTTCGCGATGGT GACCTGGCCGACAAGTTTCGCATTGCCACCGGACCGGGCTGCATCGTGCGCCAGCCCTTT CCCAAGCACGTGGAGTTACCGTGGGTGCAACCAGAGGAGCGGTGCGACTTTTATCTGAAG CGCTCCCTTGCGATTGGCGGTAACGTCGGCGACGACGCGAGGGCGGAGGAGTGTGACGTG CCCAGCGCTTTTTTTTTTTACTTTCTCGACTATTGACATCTAGTGCCGGCTCGGGCGTGC GGCTCACTCGCTGCACCCGCATTGCCATGGCTGCCACAGCTCGGGTCCTCAACGACGCGG GCTCGGCGTATCTCTTGGAGCACCAATTTGGGCTACCCCTCCCCCCCCCTTCCCCCCGAG ATTCATCCGCTGCGGCGTCGCTCGTGGGAGATGTGCCGCCAAATAAGTGACCGCTTTGAC TTCGGCTATGACGGCAACAAGGTGACGGTGCTGGAGTACAACTGCGACTCCTCTGGCGCG CTGCTAGAGTGCTGCAACACCCAAGAGATGGCCAACGACTACGGCATGTCTCAGGGGATA TCGACCGGCTCCTTCTTGGGGGCCAAGTGCGTGTCACACCTTGTGCGCCTGACGTCGAAC GAGAAGGTGTCCCCCAAGCACAAGCTGACTCACTTCATGATCGACGACGACGACGAGGAG CGCTACACCGCCATGTGCATGATGAGCTTTGCAGAGAAAGCCGGCTTTCTCACGAAGCTT TGCGTGAAGCTGATCGACTTCCGTTACCGCGACGGCACTCCTGCCCACGCCGCTCCGCTC TCCGCGCCATGCGACCACCCCATCATGTTTGACAGTGACGGTGACGAGGTTCTTATGGTG TGGAAGACGTGGTCGTGGGACACGGTGTTGAGACAACACCACCGCCAGCGCAGCGCAGCA GACTCGGTCAGCGGTCCGGCGCTCGCTGACATTCTCCTCAACAACAACATTCGCGTTATC GAGCCGCTCTGGAAAGCTGTGACAGGAAGCAAGACGATTCTCCCCTTTATGCGCGCTCTG GCTCCTGACCGCGAGAGCCTCCTCGCTGCGGACTTTGTGCCCACAAAAGACATCATCTCC CACCACTACATCTCCAAGCCCATCAACGGTTGAGCTGGGCAGAACATCATGATGTTTGAC CCCGTGACTGACGCGGCAGAGCCGAACGTGGCTCCTCAAGGGATGCTCAGTAAGAGTTCG TCGCAGCTCTTCCCCATCAAGTCGCTGGCCGCCTCCTGCTCTGCGCTACAGAGCCAGTCG ATAGACCGCACCAATGAGTGCTCGGCCGGCACGTTTTTCGACTCCGCCGTCGTCTATCAG AAGCGTTTCTTCGAAGAAATTAAAGCAAGTACTTCCCCATTTTTGTGTGACTGGATGATC AACGACGAATTTGGTGGTATCGTAGTCCGCGAAGGCGCATCGAAAATCACGAAGCTGGAT CGCAACGTCATCCCCGCGCGCGTTGTGCGCGAAAACGTCTCGCTCGGTAGGGCGTACGCT GACGAGGGCGAGACGTAG
  • Download Fasta

  • Fasta :-

    MLSLPRDHHYHAHHSGTEFVPFDQVIGITPDGVPVISNGNEFHFSNLESVTPSYQALCSS VRKAPVIVPCTKLGAKWQCVEFARRYLASRKAVWTASMPIAADMLRAEPPFVHVQDSTPV EFTRTPNRSHGPAPAMSDIIVWDQSEETPLGHVAVVTEVLPEAVRVAEQNQGFERWPQGM LYSREISMQRSSAGTVELVDEDSVLGWVTLQCPYYDFRDGDLADKFRIATGPGCIVRQPF PKHVELPWVQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFFFYFLDY*HLVPARAC GSLAAPALPWLPQLGSSTTRARRISWSTNLGYPSPPLPPEIHPLRRRSWEMCRQISDRFD FGYDGNKVTVLEYNCDSSGALLECCNTQEMANDYGMSQGISTGSFLGAKCVSHLVRLTSN EKVSPKHKLTHFMIDDDDEERYTAMCMMSFAEKAGFLTKLCVKLIDFRYRDGTPAHAAPL SAPCDHPIMFDSDGDEVLMVWKTWSWDTVLRQHHRQRSAADSVSGPALADILLNNNIRVI EPLWKAVTGSKTILPFMRALAPDRESLLAADFVPTKDIISHHYISKPING*AGQNIMMFD PVTDAAEPNVAPQGMLSKSSSQLFPIKSLAASCSALQSQSIDRTNECSAGTFFDSAVVYQ KRFFEEIKASTSPFLCDWMINDEFGGIVVREGASKITKLDRNVIPARVVRENVSLGRAYA DEGET

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.25.2380424 SNEKVSPKHK0.996unspLmjF.25.2380424 SNEKVSPKHK0.996unspLmjF.25.2380424 SNEKVSPKHK0.996unspLmjF.25.2380518 SHRQRSAADS0.992unspLmjF.25.2380325 SARRISWSTN0.997unspLmjF.25.2380348 SLRRRSWEMC0.998unsp

LmjF.25.2380      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India