LmjF.25.2430 | Xaa-Pro aminopeptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
LmjF.25.2430OTHER0.9993780.0002150.000406
No Results

  • Fasta :-

    >LmjF.25.2430 MKQSQPEVPSLEEWIAANLGSKAVVGMSPYVATVAEWERLSKKINLRPVANIVQDMMPPE KSVRKMYVRPAEFCGATCQERRAAILAELEKKDCDMIILSALDEIAWFTNLRGGDVDYNP VFYAYAVIDKHYENVRLYVNLDKVTDAVRQACEDHIDFYPYEQFEADLKQLPRGRKALVD ERQTSEAVFRILKDVGTVTVRVVCGPAQKLKAIKNEVELKGFRDCHVRDGAALTRYLAWL HDQVANKGVTDLNEYDAATKLEEFRAQGEHFVQLSFGSISSIGPNGAMCHYSPAETGSAA IRRDQLYLIDSGAHYWDGTTDVTRTICFTAPSDEQREAYTLVLKGHIALNSIIFPKGTSG IRLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGISTRPVATGANMELHSIVSDEP GYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWVD RYHAKVVASIMPHLQQAGDQNAVEYLKYHTRPLFAVNEAYTLLSPDGKGAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/96 Sequence name : 96 Sequence length : 531 VALUES OF COMPUTED PARAMETERS Coef20 : 3.215 CoefTot : -0.564 ChDiff : -12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.276 0.056 0.522 MesoH : -0.186 0.272 -0.325 0.264 MuHd_075 : 29.241 13.091 7.507 3.820 MuHd_095 : 14.376 16.867 6.126 3.672 MuHd_100 : 16.962 16.567 5.290 4.002 MuHd_105 : 18.571 14.831 4.233 3.979 Hmax_075 : 6.533 5.017 -0.763 2.602 Hmax_095 : 5.900 11.900 0.157 3.940 Hmax_100 : 0.200 6.600 -1.924 2.710 Hmax_105 : 1.225 4.988 -2.601 2.931 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9686 0.0314 DFMC : 0.9462 0.0538
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 531 LmjF.25.2430 MKQSQPEVPSLEEWIAANLGSKAVVGMSPYVATVAEWERLSKKINLRPVANIVQDMMPPEKSVRKMYVRPAEFCGATCQE 80 RRAAILAELEKKDCDMIILSALDEIAWFTNLRGGDVDYNPVFYAYAVIDKHYENVRLYVNLDKVTDAVRQACEDHIDFYP 160 YEQFEADLKQLPRGRKALVDERQTSEAVFRILKDVGTVTVRVVCGPAQKLKAIKNEVELKGFRDCHVRDGAALTRYLAWL 240 HDQVANKGVTDLNEYDAATKLEEFRAQGEHFVQLSFGSISSIGPNGAMCHYSPAETGSAAIRRDQLYLIDSGAHYWDGTT 320 DVTRTICFTAPSDEQREAYTLVLKGHIALNSIIFPKGTSGIRLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGIS 400 TRPVATGANMELHSIVSDEPGYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWVD 480 RYHAKVVASIMPHLQQAGDQNAVEYLKYHTRPLFAVNEAYTLLSPDGKGAK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.25.2430 2 -----MK|QS 0.075 . LmjF.25.2430 22 AANLGSK|AV 0.069 . LmjF.25.2430 39 TVAEWER|LS 0.080 . LmjF.25.2430 42 EWERLSK|KI 0.090 . LmjF.25.2430 43 WERLSKK|IN 0.084 . LmjF.25.2430 47 SKKINLR|PV 0.132 . LmjF.25.2430 61 DMMPPEK|SV 0.101 . LmjF.25.2430 64 PPEKSVR|KM 0.080 . LmjF.25.2430 65 PEKSVRK|MY 0.071 . LmjF.25.2430 69 VRKMYVR|PA 0.132 . LmjF.25.2430 81 GATCQER|RA 0.076 . LmjF.25.2430 82 ATCQERR|AA 0.156 . LmjF.25.2430 91 ILAELEK|KD 0.061 . LmjF.25.2430 92 LAELEKK|DC 0.134 . LmjF.25.2430 112 AWFTNLR|GG 0.076 . LmjF.25.2430 130 AYAVIDK|HY 0.069 . LmjF.25.2430 136 KHYENVR|LY 0.070 . LmjF.25.2430 143 LYVNLDK|VT 0.066 . LmjF.25.2430 149 KVTDAVR|QA 0.079 . LmjF.25.2430 169 QFEADLK|QL 0.062 . LmjF.25.2430 173 DLKQLPR|GR 0.083 . LmjF.25.2430 175 KQLPRGR|KA 0.097 . LmjF.25.2430 176 QLPRGRK|AL 0.227 . LmjF.25.2430 182 KALVDER|QT 0.091 . LmjF.25.2430 190 TSEAVFR|IL 0.147 . LmjF.25.2430 193 AVFRILK|DV 0.271 . LmjF.25.2430 201 VGTVTVR|VV 0.079 . LmjF.25.2430 209 VCGPAQK|LK 0.057 . LmjF.25.2430 211 GPAQKLK|AI 0.080 . LmjF.25.2430 214 QKLKAIK|NE 0.054 . LmjF.25.2430 220 KNEVELK|GF 0.068 . LmjF.25.2430 223 VELKGFR|DC 0.079 . LmjF.25.2430 228 FRDCHVR|DG 0.101 . LmjF.25.2430 235 DGAALTR|YL 0.096 . LmjF.25.2430 247 HDQVANK|GV 0.094 . LmjF.25.2430 260 EYDAATK|LE 0.053 . LmjF.25.2430 265 TKLEEFR|AQ 0.118 . LmjF.25.2430 302 TGSAAIR|RD 0.091 . LmjF.25.2430 303 GSAAIRR|DQ 0.192 . LmjF.25.2430 324 GTTDVTR|TI 0.083 . LmjF.25.2430 336 APSDEQR|EA 0.131 . LmjF.25.2430 344 AYTLVLK|GH 0.056 . LmjF.25.2430 356 NSIIFPK|GT 0.092 . LmjF.25.2430 362 KGTSGIR|LD 0.069 . LmjF.25.2430 368 RLDTLAR|MA 0.095 . LmjF.25.2430 402 PHGISTR|PV 0.176 . LmjF.25.2430 424 DEPGYYK|DG 0.068 . LmjF.25.2430 431 DGHYGIR|IE 0.082 . LmjF.25.2430 442 EEVVECR|TK 0.080 . LmjF.25.2430 444 VVECRTK|YS 0.072 . LmjF.25.2430 463 TMAPLCR|DL 0.130 . LmjF.25.2430 476 LLTETER|AW 0.080 . LmjF.25.2430 481 ERAWVDR|YH 0.165 . LmjF.25.2430 485 VDRYHAK|VV 0.103 . LmjF.25.2430 507 NAVEYLK|YH 0.059 . LmjF.25.2430 511 YLKYHTR|PL 0.110 . LmjF.25.2430 528 LLSPDGK|GA 0.085 . LmjF.25.2430 531 PDGKGAK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >LmjF.25.2430 ATGAAGCAAAGCCAGCCAGAGGTCCCGTCGCTCGAGGAGTGGATTGCCGCCAATCTCGGC TCCAAAGCAGTTGTTGGCATGAGCCCGTACGTCGCCACGGTGGCGGAGTGGGAACGGCTG AGCAAGAAGATCAATCTGCGCCCGGTGGCAAACATCGTTCAGGACATGATGCCGCCGGAG AAGAGCGTGCGAAAAATGTACGTGCGTCCCGCCGAGTTCTGCGGTGCCACCTGCCAGGAG CGGCGCGCCGCGATTCTCGCAGAGCTGGAGAAGAAGGACTGCGACATGATCATTCTCTCC GCACTGGATGAGATCGCATGGTTCACGAATCTGCGCGGCGGCGACGTGGACTACAACCCC GTCTTCTACGCGTACGCTGTCATTGACAAGCACTACGAAAACGTGCGCCTCTACGTGAAT CTGGACAAGGTCACAGACGCAGTGCGCCAGGCATGCGAGGATCACATCGACTTCTACCCG TACGAGCAGTTCGAGGCGGATCTCAAGCAGCTACCACGGGGTCGCAAGGCCCTCGTCGAC GAGCGCCAGACGAGCGAGGCCGTCTTTCGCATCTTGAAGGATGTCGGCACCGTGACGGTG CGCGTCGTTTGCGGTCCGGCGCAGAAGTTGAAGGCGATCAAGAATGAGGTCGAGCTCAAG GGCTTCCGCGACTGCCACGTACGCGACGGTGCCGCGCTGACGCGCTACCTTGCCTGGCTG CACGACCAGGTCGCGAACAAGGGTGTGACGGACCTGAACGAGTACGACGCGGCCACGAAG CTCGAGGAGTTCCGCGCGCAGGGGGAACACTTCGTGCAGCTCAGTTTTGGTTCCATCTCG TCCATCGGCCCTAACGGGGCGATGTGCCACTACAGCCCCGCCGAGACGGGCTCTGCTGCC ATTCGCAGAGACCAGCTGTACTTAATCGACAGCGGCGCGCACTACTGGGACGGTACCACC GATGTGACGCGCACCATCTGCTTCACAGCGCCGAGTGATGAGCAGCGCGAGGCCTACACG CTTGTCCTCAAAGGGCATATTGCACTCAACAGCATTATTTTTCCCAAGGGCACAAGCGGT ATCCGTCTCGACACCCTGGCGCGTATGGCGCTCTGGGGTGTGGGGCTGGACTACGCCCAC GGCACTGGGCATGGCGTGGGATCCTTTCTCAACGTGCACGAGGGCCCCCACGGAATCAGT ACTCGTCCAGTTGCCACGGGGGCGAACATGGAGCTGCACTCCATTGTGTCGGACGAGCCT GGCTACTACAAGGACGGGCACTACGGCATCCGCATTGAGAACCTCGAGGAGGTGGTTGAG TGTCGGACTAAGTACAGCGCGACCGGCTTCTACACCATGTCCCACCTCACGATGGCGCCT CTGTGCCGCGACCTCATCGACGTAAGCCTCCTCACAGAAACGGAGCGCGCCTGGGTAGAC CGATACCACGCCAAGGTGGTGGCGAGCATCATGCCGCACCTACAACAGGCGGGCGACCAG AACGCCGTCGAGTACCTCAAATACCACACGCGACCTCTCTTTGCGGTGAATGAGGCGTAC ACCCTGCTCAGTCCAGACGGGAAAGGGGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MKQSQPEVPSLEEWIAANLGSKAVVGMSPYVATVAEWERLSKKINLRPVANIVQDMMPPE KSVRKMYVRPAEFCGATCQERRAAILAELEKKDCDMIILSALDEIAWFTNLRGGDVDYNP VFYAYAVIDKHYENVRLYVNLDKVTDAVRQACEDHIDFYPYEQFEADLKQLPRGRKALVD ERQTSEAVFRILKDVGTVTVRVVCGPAQKLKAIKNEVELKGFRDCHVRDGAALTRYLAWL HDQVANKGVTDLNEYDAATKLEEFRAQGEHFVQLSFGSISSIGPNGAMCHYSPAETGSAA IRRDQLYLIDSGAHYWDGTTDVTRTICFTAPSDEQREAYTLVLKGHIALNSIIFPKGTSG IRLDTLARMALWGVGLDYAHGTGHGVGSFLNVHEGPHGISTRPVATGANMELHSIVSDEP GYYKDGHYGIRIENLEEVVECRTKYSATGFYTMSHLTMAPLCRDLIDVSLLTETERAWVD RYHAKVVASIMPHLQQAGDQNAVEYLKYHTRPLFAVNEAYTLLSPDGKGAK

  • title: active site
  • coordinates: H290,D310,D321,S388,E419,E433
No Results
No Results
No Results

LmjF.25.2430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India