LmjF.26.0300 | aminopeptidase-like protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.26.0300OTHER0.9825490.0030910.014360
No Results

  • Fasta :-

    >LmjF.26.0300 MAAVRHVLPSSVRPTHYHIALSPDLENATFSAEVAINVHINEPTSTFVLNAVGLSFFDVS VRAGVGGGGNDAPLAVQSITESTEDQRIFVQVDRAVTDAAQLRFRYTAAMSDNLFAFYRS QYTYEGATSYVGATQMCPAEARRVFPCWDEPAVKATFALDITVLARLRVWSNDAPRKVVQ LPDGLARWEFRPAMVMSTYVVAWVIGELETTEVVVPRSAAAGAAQRGEPASSSSVVIRAV TPRGKIEQARFALTVAAQVLPLYEECFQFPYVFPKLDLIALPNFVFGAMENWGCITFREQ TLLASEEASAMQKERVAMVVAHELAHQWFGNLATMAWWSDLWLNESFATYMAVWAVNKIF PEWVVDTQFAHDEGSRAFQLDAMRSSHPIELPVRDVREVDSIFDAISYSKGAMVLHMAAK FVGEKGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEILHSWTREQGYPYVLAAY DAATGTLALSQRRFFVVSDVAADKDAPLWKIPMAYTYGTAGGEVKTRSVVLADSTTSVSI DGAVWVKVNSGQIAFCRVQYTAEMLRGLVCPLTAKVINSTDRYSILADYAAFARGGYCDT VQVIDLLSHYHSEDNYTVWCEVAQLEKDLRGILACSSPEVCVAFNDFCNRLYSPAMQRLG LQPRQGDGHRTQQARLLIFSRLLSCSNVEATTVARDLYDKRTTSPISPDMLGCVYAVHIN THGAAAMAEVQELIAKTTYAEERVQYLGALAAVAEPSIDVPKLMDYLLSDAVSSQDMFTV MLGLAEGAQTQTIFVQQLMDKWPRLAQKAPSVLLARMLKLVEHSSDDALVAPLRRFFDSM PEEMQSRTRMSFEQGVEGLLCNVAWAARDGARIAHYLLHKGTPVKTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/33 Sequence name : 33 Sequence length : 887 VALUES OF COMPUTED PARAMETERS Coef20 : 4.079 CoefTot : -0.360 ChDiff : -18 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.418 0.142 0.595 MesoH : -0.210 0.526 -0.249 0.283 MuHd_075 : 14.400 14.614 3.102 4.752 MuHd_095 : 33.729 26.409 8.971 7.805 MuHd_100 : 26.146 18.931 7.048 5.558 MuHd_105 : 20.934 13.902 5.724 4.347 Hmax_075 : 7.500 11.300 0.024 4.400 Hmax_095 : 14.963 18.550 3.344 5.416 Hmax_100 : 9.900 12.000 0.645 4.070 Hmax_105 : 8.800 10.300 1.939 4.120 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3050 0.6950 DFMC : 0.5367 0.4633
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 887 LmjF.26.0300 MAAVRHVLPSSVRPTHYHIALSPDLENATFSAEVAINVHINEPTSTFVLNAVGLSFFDVSVRAGVGGGGNDAPLAVQSIT 80 ESTEDQRIFVQVDRAVTDAAQLRFRYTAAMSDNLFAFYRSQYTYEGATSYVGATQMCPAEARRVFPCWDEPAVKATFALD 160 ITVLARLRVWSNDAPRKVVQLPDGLARWEFRPAMVMSTYVVAWVIGELETTEVVVPRSAAAGAAQRGEPASSSSVVIRAV 240 TPRGKIEQARFALTVAAQVLPLYEECFQFPYVFPKLDLIALPNFVFGAMENWGCITFREQTLLASEEASAMQKERVAMVV 320 AHELAHQWFGNLATMAWWSDLWLNESFATYMAVWAVNKIFPEWVVDTQFAHDEGSRAFQLDAMRSSHPIELPVRDVREVD 400 SIFDAISYSKGAMVLHMAAKFVGEKGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEILHSWTREQGYPYVLAAY 480 DAATGTLALSQRRFFVVSDVAADKDAPLWKIPMAYTYGTAGGEVKTRSVVLADSTTSVSIDGAVWVKVNSGQIAFCRVQY 560 TAEMLRGLVCPLTAKVINSTDRYSILADYAAFARGGYCDTVQVIDLLSHYHSEDNYTVWCEVAQLEKDLRGILACSSPEV 640 CVAFNDFCNRLYSPAMQRLGLQPRQGDGHRTQQARLLIFSRLLSCSNVEATTVARDLYDKRTTSPISPDMLGCVYAVHIN 720 THGAAAMAEVQELIAKTTYAEERVQYLGALAAVAEPSIDVPKLMDYLLSDAVSSQDMFTVMLGLAEGAQTQTIFVQQLMD 800 KWPRLAQKAPSVLLARMLKLVEHSSDDALVAPLRRFFDSMPEEMQSRTRMSFEQGVEGLLCNVAWAARDGARIAHYLLHK 880 GTPVKTE 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ....... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.26.0300 5 --MAAVR|HV 0.099 . LmjF.26.0300 13 VLPSSVR|PT 0.082 . LmjF.26.0300 62 FFDVSVR|AG 0.079 . LmjF.26.0300 87 ESTEDQR|IF 0.079 . LmjF.26.0300 94 IFVQVDR|AV 0.118 . LmjF.26.0300 103 TDAAQLR|FR 0.108 . LmjF.26.0300 105 AAQLRFR|YT 0.103 . LmjF.26.0300 119 NLFAFYR|SQ 0.164 . LmjF.26.0300 142 MCPAEAR|RV 0.121 . LmjF.26.0300 143 CPAEARR|VF 0.101 . LmjF.26.0300 154 WDEPAVK|AT 0.068 . LmjF.26.0300 166 DITVLAR|LR 0.074 . LmjF.26.0300 168 TVLARLR|VW 0.070 . LmjF.26.0300 176 WSNDAPR|KV 0.137 . LmjF.26.0300 177 SNDAPRK|VV 0.082 . LmjF.26.0300 187 LPDGLAR|WE 0.084 . LmjF.26.0300 191 LARWEFR|PA 0.116 . LmjF.26.0300 217 TEVVVPR|SA 0.289 . LmjF.26.0300 226 AAGAAQR|GE 0.080 . LmjF.26.0300 238 SSSVVIR|AV 0.285 . LmjF.26.0300 243 IRAVTPR|GK 0.176 . LmjF.26.0300 245 AVTPRGK|IE 0.056 . LmjF.26.0300 250 GKIEQAR|FA 0.188 . LmjF.26.0300 275 FPYVFPK|LD 0.074 . LmjF.26.0300 298 WGCITFR|EQ 0.077 . LmjF.26.0300 313 EASAMQK|ER 0.064 . LmjF.26.0300 315 SAMQKER|VA 0.150 . LmjF.26.0300 358 AVWAVNK|IF 0.058 . LmjF.26.0300 376 AHDEGSR|AF 0.065 . LmjF.26.0300 384 FQLDAMR|SS 0.121 . LmjF.26.0300 394 PIELPVR|DV 0.130 . LmjF.26.0300 397 LPVRDVR|EV 0.479 . LmjF.26.0300 410 DAISYSK|GA 0.065 . LmjF.26.0300 420 VLHMAAK|FV 0.156 . LmjF.26.0300 425 AKFVGEK|GF 0.067 . LmjF.26.0300 429 GEKGFQR|GL 0.105 . LmjF.26.0300 437 LVDYLSR|YA 0.106 . LmjF.26.0300 461 PAAPNLK|EI 0.059 . LmjF.26.0300 469 ILHSWTR|EQ 0.078 . LmjF.26.0300 492 TLALSQR|RF 0.092 . LmjF.26.0300 493 LALSQRR|FF 0.119 . LmjF.26.0300 504 SDVAADK|DA 0.064 . LmjF.26.0300 510 KDAPLWK|IP 0.068 . LmjF.26.0300 525 TAGGEVK|TR 0.073 . LmjF.26.0300 527 GGEVKTR|SV 0.206 . LmjF.26.0300 547 DGAVWVK|VN 0.065 . LmjF.26.0300 557 GQIAFCR|VQ 0.099 . LmjF.26.0300 566 YTAEMLR|GL 0.077 . LmjF.26.0300 575 VCPLTAK|VI 0.057 . LmjF.26.0300 582 VINSTDR|YS 0.090 . LmjF.26.0300 594 DYAAFAR|GG 0.088 . LmjF.26.0300 627 EVAQLEK|DL 0.073 . LmjF.26.0300 630 QLEKDLR|GI 0.081 . LmjF.26.0300 650 FNDFCNR|LY 0.093 . LmjF.26.0300 658 YSPAMQR|LG 0.066 . LmjF.26.0300 664 RLGLQPR|QG 0.118 . LmjF.26.0300 670 RQGDGHR|TQ 0.080 . LmjF.26.0300 675 HRTQQAR|LL 0.109 . LmjF.26.0300 681 RLLIFSR|LL 0.085 . LmjF.26.0300 695 EATTVAR|DL 0.143 . LmjF.26.0300 700 ARDLYDK|RT 0.055 . LmjF.26.0300 701 RDLYDKR|TT 0.212 . LmjF.26.0300 736 VQELIAK|TT 0.071 . LmjF.26.0300 743 TTYAEER|VQ 0.082 . LmjF.26.0300 762 PSIDVPK|LM 0.066 . LmjF.26.0300 801 VQQLMDK|WP 0.062 . LmjF.26.0300 804 LMDKWPR|LA 0.103 . LmjF.26.0300 808 WPRLAQK|AP 0.076 . LmjF.26.0300 816 PSVLLAR|ML 0.113 . LmjF.26.0300 819 LLARMLK|LV 0.189 . LmjF.26.0300 834 ALVAPLR|RF 0.091 . LmjF.26.0300 835 LVAPLRR|FF 0.155 . LmjF.26.0300 847 PEEMQSR|TR 0.082 . LmjF.26.0300 849 EMQSRTR|MS 0.102 . LmjF.26.0300 868 NVAWAAR|DG 0.098 . LmjF.26.0300 872 AARDGAR|IA 0.135 . LmjF.26.0300 880 AHYLLHK|GT 0.064 . LmjF.26.0300 885 HKGTPVK|TE 0.063 . ____________________________^_________________

  • Fasta :-

    >LmjF.26.0300 ATGGCCGCCGTTCGCCACGTTCTACCGAGCAGTGTGCGACCGACGCACTACCACATTGCC CTCTCTCCAGATCTCGAGAACGCCACCTTCTCGGCTGAGGTGGCCATCAACGTGCACATC AATGAGCCCACAAGCACCTTCGTGCTGAATGCCGTGGGACTATCGTTTTTCGATGTCTCA GTGCGCGCCGGCGTGGGCGGCGGTGGCAACGATGCTCCACTGGCTGTGCAGAGCATCACG GAGTCGACGGAGGACCAGCGCATATTTGTGCAGGTCGATCGGGCAGTCACCGATGCCGCT CAGCTGCGGTTTCGCTACACGGCGGCCATGAGCGACAATCTCTTCGCTTTCTACCGCAGC CAGTACACGTACGAGGGCGCCACGTCGTACGTGGGGGCGACTCAGATGTGCCCCGCGGAG GCCCGCCGCGTCTTCCCCTGCTGGGATGAGCCGGCTGTCAAAGCAACATTTGCCCTCGAC ATAACCGTCCTCGCTAGGCTGCGGGTGTGGAGCAACGACGCACCGCGCAAGGTGGTGCAG CTGCCGGACGGCCTCGCGCGTTGGGAATTCCGCCCTGCCATGGTCATGTCCACCTACGTC GTCGCCTGGGTGATTGGAGAGCTGGAGACGACGGAGGTGGTGGTGCCACGGAGCGCTGCC GCAGGGGCTGCTCAGCGTGGCGAACCGGCATCGTCCTCCTCCGTCGTCATCCGTGCAGTT ACCCCACGCGGCAAGATTGAGCAAGCGCGATTCGCGCTGACGGTGGCCGCGCAAGTGCTG CCGCTCTACGAGGAGTGCTTCCAGTTTCCGTATGTCTTTCCGAAGCTGGACCTCATTGCA TTGCCCAATTTTGTCTTTGGGGCTATGGAGAACTGGGGCTGCATCACGTTCCGCGAGCAG ACACTACTGGCCTCGGAGGAGGCGAGCGCCATGCAGAAAGAGCGGGTCGCGATGGTGGTG GCGCATGAGCTAGCCCATCAGTGGTTCGGCAACTTGGCGACCATGGCCTGGTGGTCCGAC CTATGGCTGAACGAGTCCTTTGCCACCTACATGGCCGTGTGGGCGGTGAACAAGATCTTT CCTGAGTGGGTGGTGGACACGCAGTTCGCGCACGACGAGGGAAGCCGGGCATTCCAGCTG GACGCCATGCGCTCCTCGCACCCCATCGAGTTGCCGGTGCGGGATGTGCGAGAGGTGGAC AGCATTTTCGATGCCATCAGCTACTCCAAGGGAGCCATGGTGCTGCACATGGCGGCCAAG TTCGTTGGCGAGAAAGGATTCCAGCGTGGGCTGGTTGACTATCTCTCCCGCTACGCCTAC GCGTCCGCTACATCGCTGCAGCTGTGGGAAGCCCTCTCCGGCCCTGCAGCGCCGAATTTA AAAGAGATCCTTCACAGCTGGACAAGGGAGCAGGGGTACCCGTATGTGCTGGCCGCATAC GATGCAGCCACCGGTACACTGGCGCTGTCGCAGCGGCGCTTCTTCGTCGTGAGCGACGTG GCGGCAGACAAGGATGCGCCACTGTGGAAAATTCCCATGGCTTACACGTACGGGACCGCG GGTGGGGAGGTCAAGACCCGGTCCGTCGTGCTCGCCGACTCCACCACGTCCGTCTCGATT GACGGCGCGGTGTGGGTGAAGGTGAACTCGGGCCAGATCGCCTTCTGCCGTGTGCAGTAC ACGGCAGAGATGCTGCGCGGGCTCGTTTGTCCGCTTACCGCGAAGGTCATCAATTCCACG GACCGCTACTCCATTCTCGCGGACTACGCGGCCTTCGCGCGCGGAGGCTACTGCGACACG GTGCAGGTTATCGATCTTCTCTCCCATTACCACAGCGAGGACAACTACACGGTGTGGTGC GAGGTGGCCCAGCTCGAGAAGGACCTGCGCGGCATCCTCGCCTGCAGTTCACCGGAGGTG TGCGTCGCATTCAACGACTTCTGCAATCGTCTCTACTCCCCAGCGATGCAGCGGCTCGGG TTGCAGCCACGCCAGGGAGACGGTCACCGCACCCAGCAAGCGCGCCTACTAATCTTCTCT CGGCTGCTCTCGTGCAGCAACGTCGAGGCCACGACGGTGGCACGCGACCTGTACGACAAG CGAACCACGAGCCCCATTTCGCCTGACATGCTTGGTTGCGTGTACGCTGTACATATCAAC ACCCACGGCGCGGCGGCGATGGCCGAGGTGCAGGAGCTCATCGCCAAAACCACATACGCG GAGGAACGGGTGCAGTACCTTGGTGCCCTCGCGGCGGTGGCGGAGCCGTCCATTGACGTG CCGAAGCTGATGGACTATCTTCTGTCGGACGCGGTGAGCAGTCAGGACATGTTCACGGTG ATGCTCGGCTTGGCGGAGGGTGCACAGACACAGACCATCTTTGTTCAGCAGCTGATGGAC AAGTGGCCGCGCCTGGCCCAGAAGGCGCCATCCGTGCTGCTGGCGAGGATGCTGAAGCTG GTCGAGCACAGCAGCGACGATGCGCTGGTGGCACCACTGCGCCGCTTCTTCGACAGCATG CCTGAAGAAATGCAGTCTCGCACTCGAATGTCCTTCGAGCAGGGTGTGGAGGGCCTCCTG TGCAATGTGGCGTGGGCCGCTCGTGATGGCGCCCGCATTGCCCACTATCTACTGCACAAG GGAACCCCCGTCAAAACAGAGTAG
  • Download Fasta

  • Fasta :-

    MAAVRHVLPSSVRPTHYHIALSPDLENATFSAEVAINVHINEPTSTFVLNAVGLSFFDVS VRAGVGGGGNDAPLAVQSITESTEDQRIFVQVDRAVTDAAQLRFRYTAAMSDNLFAFYRS QYTYEGATSYVGATQMCPAEARRVFPCWDEPAVKATFALDITVLARLRVWSNDAPRKVVQ LPDGLARWEFRPAMVMSTYVVAWVIGELETTEVVVPRSAAAGAAQRGEPASSSSVVIRAV TPRGKIEQARFALTVAAQVLPLYEECFQFPYVFPKLDLIALPNFVFGAMENWGCITFREQ TLLASEEASAMQKERVAMVVAHELAHQWFGNLATMAWWSDLWLNESFATYMAVWAVNKIF PEWVVDTQFAHDEGSRAFQLDAMRSSHPIELPVRDVREVDSIFDAISYSKGAMVLHMAAK FVGEKGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEILHSWTREQGYPYVLAAY DAATGTLALSQRRFFVVSDVAADKDAPLWKIPMAYTYGTAGGEVKTRSVVLADSTTSVSI DGAVWVKVNSGQIAFCRVQYTAEMLRGLVCPLTAKVINSTDRYSILADYAAFARGGYCDT VQVIDLLSHYHSEDNYTVWCEVAQLEKDLRGILACSSPEVCVAFNDFCNRLYSPAMQRLG LQPRQGDGHRTQQARLLIFSRLLSCSNVEATTVARDLYDKRTTSPISPDMLGCVYAVHIN THGAAAMAEVQELIAKTTYAEERVQYLGALAAVAEPSIDVPKLMDYLLSDAVSSQDMFTV MLGLAEGAQTQTIFVQQLMDKWPRLAQKAPSVLLARMLKLVEHSSDDALVAPLRRFFDSM PEEMQSRTRMSFEQGVEGLLCNVAWAARDGARIAHYLLHKGTPVKTE

  • title: Zn binding site
  • coordinates: H322,H326,E345
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.26.0300704 SKRTTSPISP0.997unspLmjF.26.0300704 SKRTTSPISP0.997unspLmjF.26.0300704 SKRTTSPISP0.997unspLmjF.26.0300707 STSPISPDML0.991unspLmjF.26.0300824 SLVEHSSDDA0.993unspLmjF.26.0300851 SRTRMSFEQG0.997unspLmjF.26.030082 SSITESTEDQ0.997unspLmjF.26.0300241 TIRAVTPRGK0.993unsp

LmjF.26.0300      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India