LmjF.26.1570 | thimet oligopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.26.1570OTHER0.9929950.0014240.005581
No Results

  • Fasta :-

    >LmjF.26.1570 MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGISAADRTFENTAK SIDMASIELEVSASLLSVIASVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEV CAAPAYEAVYASGKAPREYTYWMEEQLADYRRRGMELPEEEFQKVVKLQKELASLCTVFQ QNISEDKTEVHFTVDELKGVPESVLSALQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA MAQAFTNRAYPVNDKVLKDIIEKRHQLAVILGYPSFAHLYISDKMAKTPEMAQTFVESLI PKLQKKWTAEVELLKKHLHPSCSLSPAGDIEAYDIPFMINQIKKTLLNVSETAIQEYFPM DATVKALFDIYQSFFDVTFLQVDNGSELWHSDAKTLEVNDNKSGCVLGYIILDLFPREGK YSHACCHSVVPPVLLKEGGNDFSPALAVVISNFPAATADRPALFLHDDVETFFHEFGHAI HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRTLIDAK VASKNAFSGRDTLRQLQFATYSLQIFGLPFSTQPRDNLDTTQLFYDLEPRVMPGVNYEHN THFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGLLDPKMGRRYVDCIIGVGGSQ DPNDMLVKFLGREPNNEAFLRNIGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/685 Sequence name : 685 Sequence length : 685 VALUES OF COMPUTED PARAMETERS Coef20 : 4.747 CoefTot : 0.487 ChDiff : -18 ZoneTo : 27 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.524 0.118 0.544 MesoH : -0.406 0.427 -0.304 0.266 MuHd_075 : 24.041 15.226 7.506 4.474 MuHd_095 : 26.119 16.179 9.464 5.191 MuHd_100 : 28.269 20.818 10.815 6.257 MuHd_105 : 26.795 21.691 10.254 7.121 Hmax_075 : 15.050 13.500 3.536 4.730 Hmax_095 : 15.700 17.700 5.665 6.160 Hmax_100 : 17.600 22.500 6.719 6.000 Hmax_105 : 16.450 24.033 5.915 8.073 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9391 0.0609 DFMC : 0.8689 0.1311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 685 LmjF.26.1570 MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGISAADRTFENTAKSIDMASIELEVSASLLSVIA 80 SVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEVCAAPAYEAVYASGKAPREYTYWMEEQLADYRRRGMELPEE 160 EFQKVVKLQKELASLCTVFQQNISEDKTEVHFTVDELKGVPESVLSALQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA 240 MAQAFTNRAYPVNDKVLKDIIEKRHQLAVILGYPSFAHLYISDKMAKTPEMAQTFVESLIPKLQKKWTAEVELLKKHLHP 320 SCSLSPAGDIEAYDIPFMINQIKKTLLNVSETAIQEYFPMDATVKALFDIYQSFFDVTFLQVDNGSELWHSDAKTLEVND 400 NKSGCVLGYIILDLFPREGKYSHACCHSVVPPVLLKEGGNDFSPALAVVISNFPAATADRPALFLHDDVETFFHEFGHAI 480 HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRTLIDAKVASKNAFSGRDTLRQLQFAT 560 YSLQIFGLPFSTQPRDNLDTTQLFYDLEPRVMPGVNYEHNTHFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGL 640 LDPKMGRRYVDCIIGVGGSQDPNDMLVKFLGREPNNEAFLRNIGV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................P............................................................. 560 ................................................................................ 640 ............................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.26.1570 15 NISTVEK|CA 0.070 . LmjF.26.1570 22 CAALFPK|TV 0.107 . LmjF.26.1570 32 ACEDLVK|AA 0.063 . LmjF.26.1570 35 DLVKAAK|HR 0.061 . LmjF.26.1570 37 VKAAKHR|AE 0.099 . LmjF.26.1570 44 AEQSLGK|IY 0.069 . LmjF.26.1570 53 GISAADR|TF 0.107 . LmjF.26.1570 60 TFENTAK|SI 0.092 . LmjF.26.1570 86 ASVSPSK|EV 0.072 . LmjF.26.1570 89 SPSKEVR|DE 0.177 . LmjF.26.1570 94 VRDEATK|RV 0.065 . LmjF.26.1570 95 RDEATKR|VV 0.286 . LmjF.26.1570 111 DNFESNR|QL 0.094 . LmjF.26.1570 118 QLYSALK|EV 0.074 . LmjF.26.1570 134 AVYASGK|AP 0.063 . LmjF.26.1570 137 ASGKAPR|EY 0.103 . LmjF.26.1570 151 EQLADYR|RR 0.079 . LmjF.26.1570 152 QLADYRR|RG 0.112 . LmjF.26.1570 153 LADYRRR|GM 0.158 . LmjF.26.1570 164 PEEEFQK|VV 0.067 . LmjF.26.1570 167 EFQKVVK|LQ 0.056 . LmjF.26.1570 170 KVVKLQK|EL 0.057 . LmjF.26.1570 187 QNISEDK|TE 0.056 . LmjF.26.1570 198 FTVDELK|GV 0.072 . LmjF.26.1570 210 VLSALQR|TE 0.090 . LmjF.26.1570 219 AGECTLK|MD 0.057 . LmjF.26.1570 230 TYFAVMK|NC 0.067 . LmjF.26.1570 238 CEVASTR|QA 0.127 . LmjF.26.1570 248 AQAFTNR|AY 0.091 . LmjF.26.1570 255 AYPVNDK|VL 0.057 . LmjF.26.1570 258 VNDKVLK|DI 0.093 . LmjF.26.1570 263 LKDIIEK|RH 0.054 . LmjF.26.1570 264 KDIIEKR|HQ 0.178 . LmjF.26.1570 284 HLYISDK|MA 0.075 . LmjF.26.1570 287 ISDKMAK|TP 0.069 . LmjF.26.1570 302 VESLIPK|LQ 0.062 . LmjF.26.1570 305 LIPKLQK|KW 0.066 . LmjF.26.1570 306 IPKLQKK|WT 0.140 . LmjF.26.1570 315 AEVELLK|KH 0.051 . LmjF.26.1570 316 EVELLKK|HL 0.084 . LmjF.26.1570 343 FMINQIK|KT 0.059 . LmjF.26.1570 344 MINQIKK|TL 0.106 . LmjF.26.1570 365 PMDATVK|AL 0.069 . LmjF.26.1570 394 LWHSDAK|TL 0.071 . LmjF.26.1570 402 LEVNDNK|SG 0.069 . LmjF.26.1570 417 ILDLFPR|EG 0.073 . LmjF.26.1570 420 LFPREGK|YS 0.142 . LmjF.26.1570 436 VPPVLLK|EG 0.058 . LmjF.26.1570 460 PAATADR|PA 0.083 . LmjF.26.1570 486 IHSLMGR|TR 0.104 . LmjF.26.1570 488 SLMGRTR|MA 0.134 . LmjF.26.1570 496 ATFAGTR|VK 0.069 . LmjF.26.1570 498 FAGTRVK|RD 0.067 . LmjF.26.1570 499 AGTRVKR|DF 0.578 *ProP* LmjF.26.1570 521 EPEILQK|IT 0.069 . LmjF.26.1570 527 KITSHYK|TK 0.066 . LmjF.26.1570 529 TSHYKTK|EQ 0.068 . LmjF.26.1570 534 TKEQLPR|TL 0.119 . LmjF.26.1570 540 RTLIDAK|VA 0.070 . LmjF.26.1570 544 DAKVASK|NA 0.074 . LmjF.26.1570 550 KNAFSGR|DT 0.191 . LmjF.26.1570 554 SGRDTLR|QL 0.099 . LmjF.26.1570 575 PFSTQPR|DN 0.118 . LmjF.26.1570 590 FYDLEPR|VM 0.066 . LmjF.26.1570 624 YGYMWSK|VF 0.057 . LmjF.26.1570 635 DLFEYIR|SH 0.098 . LmjF.26.1570 644 NGLLDPK|MG 0.057 . LmjF.26.1570 647 LDPKMGR|RY 0.079 . LmjF.26.1570 648 DPKMGRR|YV 0.289 . LmjF.26.1570 668 PNDMLVK|FL 0.077 . LmjF.26.1570 672 LVKFLGR|EP 0.069 . LmjF.26.1570 681 NNEAFLR|NI 0.128 . ____________________________^_________________

  • Fasta :-

    >LmjF.26.1570 ATGGCCGCTACTTCGATCTTTGCGAATATTTCCACGGTCGAAAAATGTGCCGCACTGTTT CCCAAGACGGTTGCTGCATGTGAGGACCTGGTCAAGGCAGCGAAGCATCGCGCAGAGCAG TCGCTGGGCAAGATCTACGGCATCTCTGCTGCCGACCGCACCTTTGAAAACACTGCCAAG TCCATTGATATGGCGTCGATCGAGCTGGAGGTGTCGGCCAGTCTGCTGTCCGTCATCGCA AGCGTGTCTCCGAGCAAGGAAGTGCGTGACGAGGCAACCAAGCGTGTTGTAGAGCTCGAG ACTTTTTCTATTGACAATTTCGAATCGAACCGCCAGCTGTACTCTGCGCTGAAGGAGGTG TGTGCCGCGCCGGCGTATGAGGCCGTGTACGCGAGCGGGAAGGCACCGCGTGAGTATACG TACTGGATGGAGGAGCAGCTTGCTGATTACCGCCGCAGAGGTATGGAGCTGCCAGAGGAA GAGTTCCAGAAGGTCGTCAAGCTGCAAAAGGAGCTTGCGTCGCTGTGCACGGTGTTTCAG CAGAACATCAGCGAAGACAAGACGGAGGTGCATTTTACGGTGGATGAGCTGAAGGGCGTG CCAGAGAGCGTGCTGTCGGCACTGCAGCGCACGGAGGCCGGCGAGTGCACGCTGAAGATG GACTACCCGACCTACTTCGCCGTGATGAAGAACTGCGAGGTGGCGTCAACGCGTCAGGCG ATGGCGCAAGCCTTCACAAACCGCGCGTACCCCGTGAACGACAAAGTGCTGAAGGACATT ATCGAAAAGCGCCACCAGCTGGCAGTCATCCTCGGCTACCCGTCCTTCGCGCATCTGTAC ATCTCAGACAAGATGGCGAAGACGCCGGAGATGGCGCAGACGTTTGTGGAAAGCCTGATC CCGAAGCTGCAGAAGAAGTGGACGGCTGAGGTGGAGCTGCTCAAGAAGCACCTGCACCCC AGCTGCTCGCTGTCGCCTGCAGGGGATATAGAGGCTTACGATATCCCTTTCATGATCAAC CAGATCAAGAAGACGCTGCTGAATGTGAGCGAGACAGCGATCCAGGAGTACTTCCCCATG GACGCGACAGTGAAAGCGCTCTTCGACATCTACCAGTCCTTCTTTGACGTGACGTTCCTG CAGGTGGACAACGGGTCGGAGCTGTGGCACAGCGACGCAAAGACGCTGGAGGTCAATGAC AACAAAAGCGGCTGCGTGCTGGGCTATATCATCCTTGATCTATTCCCTCGTGAAGGCAAG TACTCGCACGCGTGCTGCCACTCTGTGGTGCCACCCGTGCTTCTCAAGGAAGGCGGAAAC GACTTCTCCCCGGCGCTGGCCGTTGTCATTTCGAATTTCCCAGCAGCCACGGCTGACCGG CCGGCGCTGTTCCTGCACGACGATGTCGAAACCTTCTTTCACGAGTTTGGCCACGCTATT CACTCTCTGATGGGGAGGACGCGTATGGCGACCTTTGCAGGCACGCGTGTGAAGCGTGAC TTCGTGGAGCTGCCGTCCCAGATGCTTGAGGAGTGGCTGTGGGAACCGGAGATTCTGCAG AAGATCACGAGTCATTACAAGACGAAGGAGCAGCTGCCACGTACGTTGATCGACGCCAAG GTGGCATCGAAGAACGCGTTCAGTGGACGCGACACGCTGCGCCAGCTGCAGTTTGCGACG TATTCGCTTCAGATTTTCGGACTGCCATTCTCGACGCAGCCGCGCGACAACCTCGACACT ACGCAGCTCTTCTACGATTTGGAGCCGCGCGTGATGCCCGGTGTGAACTACGAGCATAAC ACACACTTTGAGAGCGCGTTCGGACACTTGACGGGCTACGGTGCCGGCTACTACGGGTAC ATGTGGTCCAAGGTGTTTGCCTTGGACCTGTTCGAGTACATCCGCTCGCACAACGGTCTC CTCGACCCAAAGATGGGCCGCCGCTACGTGGACTGCATCATCGGTGTCGGTGGCAGCCAG GACCCGAACGACATGCTTGTCAAGTTCCTCGGGCGCGAGCCGAACAATGAGGCATTTCTG CGCAACATTGGTGTGTAG
  • Download Fasta

  • Fasta :-

    MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGISAADRTFENTAK SIDMASIELEVSASLLSVIASVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEV CAAPAYEAVYASGKAPREYTYWMEEQLADYRRRGMELPEEEFQKVVKLQKELASLCTVFQ QNISEDKTEVHFTVDELKGVPESVLSALQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA MAQAFTNRAYPVNDKVLKDIIEKRHQLAVILGYPSFAHLYISDKMAKTPEMAQTFVESLI PKLQKKWTAEVELLKKHLHPSCSLSPAGDIEAYDIPFMINQIKKTLLNVSETAIQEYFPM DATVKALFDIYQSFFDVTFLQVDNGSELWHSDAKTLEVNDNKSGCVLGYIILDLFPREGK YSHACCHSVVPPVLLKEGGNDFSPALAVVISNFPAATADRPALFLHDDVETFFHEFGHAI HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRTLIDAK VASKNAFSGRDTLRQLQFATYSLQIFGLPFSTQPRDNLDTTQLFYDLEPRVMPGVNYEHN THFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGLLDPKMGRRYVDCIIGVGGSQ DPNDMLVKFLGREPNNEAFLRNIGV

  • title: Zn binding site
  • coordinates: H474,H478,E503
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.26.1570548 SKNAFSGRDT0.997unspLmjF.26.1570552 TSGRDTLRQL0.992unsp

LmjF.26.1570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India