LmjF.26.2420 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.26.2420OTHER0.9996290.0003190.000052
No Results

  • Fasta :-

    >LmjF.26.2420 MESVEAVELFSEHSARYRYRVPVSVIRELPYEGSHYSAEFNVGGWFWRFHIQERSAEAQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLR PESGFVYMVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSVVGAGVAGTNG GQILPSRGPSVRPVGRRGGGTPLGRSGRMSYSPGRVGTSALVPMEGSVDRPGASAGAAVR RGFYSDPNGGQMMTLDSASTIGGDGGGRGAGSAVVRAPLAYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLGAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNALIPPMKNTLGKQLAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPPFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFNNTNALRLLIYSVKHQIPELRER AISYVARNFSAMIRNDSQAWELISELPQAAVVSLFRTVTEQPPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/280 Sequence name : 280 Sequence length : 644 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 2.024 0.346 0.696 MesoH : -0.056 0.848 -0.121 0.380 MuHd_075 : 26.848 15.321 7.024 4.371 MuHd_095 : 21.060 9.706 6.879 1.835 MuHd_100 : 28.879 12.110 8.180 3.226 MuHd_105 : 36.167 14.627 9.127 4.814 Hmax_075 : 4.550 9.683 -0.610 3.617 Hmax_095 : -0.875 3.300 -1.246 1.698 Hmax_100 : 5.400 4.300 -1.237 2.420 Hmax_105 : 10.967 9.683 1.452 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9513 0.0487 DFMC : 0.9427 0.0573
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 644 LmjF.26.2420 MESVEAVELFSEHSARYRYRVPVSVIRELPYEGSHYSAEFNVGGWFWRFHIQERSAEAQRFLALHLQSCTPGAVSVHFKL 80 TAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLRPESGFVYMVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSA 160 TRSVTPTRSVVGAGVAGTNGGQILPSRGPSVRPVGRRGGGTPLGRSGRMSYSPGRVGTSALVPMEGSVDRPGASAGAAVR 240 RGFYSDPNGGQMMTLDSASTIGGDGGGRGAGSAVVRAPLAYPFAHLEILCDMSFDVQGVRVKAHRCVIGARMQPLLPEQM 320 LPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPESLLDLYLLAAACEFYDLGAVCIRYVRPLLTPENILPIVLTR 400 YNAADEVLTSLYLHVLLDNYDILIQDRQFEEIPGHLFRRLSLILYSKETVPNALIPPMKNTLGKQLAWLAESGEYSDYEW 480 VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPPFTTNEFDFSLRSWQKLLMGMYRRHLDTARDFSAEDIAIIFKMQ 560 QVLIMDGQLKREADEAFNNTNALRLLIYSVKHQIPELRERAISYVARNFSAMIRNDSQAWELISELPQAAVVSLFRTVTE 640 QPPL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.26.2420 16 FSEHSAR|YR 0.129 . LmjF.26.2420 18 EHSARYR|YR 0.095 . LmjF.26.2420 20 SARYRYR|VP 0.102 . LmjF.26.2420 27 VPVSVIR|EL 0.088 . LmjF.26.2420 48 VGGWFWR|FH 0.128 . LmjF.26.2420 54 RFHIQER|SA 0.318 . LmjF.26.2420 60 RSAEAQR|FL 0.099 . LmjF.26.2420 79 AVSVHFK|LT 0.086 . LmjF.26.2420 86 LTAVCMR|DP 0.112 . LmjF.26.2420 92 RDPLQSR|SK 0.093 . LmjF.26.2420 94 PLQSRSK|TF 0.059 . LmjF.26.2420 101 TFNCTFK|KA 0.089 . LmjF.26.2420 102 FNCTFKK|AG 0.117 . LmjF.26.2420 120 AIEQLLR|PE 0.081 . LmjF.26.2420 135 VQETGTR|CV 0.085 . LmjF.26.2420 153 NGSGNGR|AP 0.080 . LmjF.26.2420 158 GRAPPVR|SA 0.256 . LmjF.26.2420 162 PVRSATR|SV 0.190 . LmjF.26.2420 168 RSVTPTR|SV 0.244 . LmjF.26.2420 187 GQILPSR|GP 0.091 . LmjF.26.2420 192 SRGPSVR|PV 0.232 . LmjF.26.2420 196 SVRPVGR|RG 0.097 . LmjF.26.2420 197 VRPVGRR|GG 0.188 . LmjF.26.2420 205 GGTPLGR|SG 0.095 . LmjF.26.2420 208 PLGRSGR|MS 0.274 . LmjF.26.2420 215 MSYSPGR|VG 0.084 . LmjF.26.2420 230 MEGSVDR|PG 0.090 . LmjF.26.2420 240 SAGAAVR|RG 0.077 . LmjF.26.2420 241 AGAAVRR|GF 0.161 . LmjF.26.2420 268 GGDGGGR|GA 0.104 . LmjF.26.2420 276 AGSAVVR|AP 0.107 . LmjF.26.2420 300 FDVQGVR|VK 0.060 . LmjF.26.2420 302 VQGVRVK|AH 0.066 . LmjF.26.2420 305 VRVKAHR|CV 0.186 . LmjF.26.2420 311 RCVIGAR|MQ 0.081 . LmjF.26.2420 343 VFTTFLR|YV 0.114 . LmjF.26.2420 382 LGAVCIR|YV 0.150 . LmjF.26.2420 385 VCIRYVR|PL 0.151 . LmjF.26.2420 400 LPIVLTR|YN 0.107 . LmjF.26.2420 427 DILIQDR|QF 0.095 . LmjF.26.2420 438 IPGHLFR|RL 0.124 . LmjF.26.2420 439 PGHLFRR|LS 0.108 . LmjF.26.2420 447 SLILYSK|ET 0.057 . LmjF.26.2420 459 ALIPPMK|NT 0.071 . LmjF.26.2420 464 MKNTLGK|QL 0.079 . LmjF.26.2420 493 YAVHAHR|YI 0.112 . LmjF.26.2420 499 RYILACR|CV 0.104 . LmjF.26.2420 510 SQAMNPR|SP 0.188 . LmjF.26.2420 528 EFDFSLR|SW 0.133 . LmjF.26.2420 532 SLRSWQK|LL 0.067 . LmjF.26.2420 539 LLMGMYR|RH 0.080 . LmjF.26.2420 540 LMGMYRR|HL 0.239 . LmjF.26.2420 546 RHLDTAR|DF 0.129 . LmjF.26.2420 558 DIAIIFK|MQ 0.061 . LmjF.26.2420 570 IMDGQLK|RE 0.055 . LmjF.26.2420 571 MDGQLKR|EA 0.291 . LmjF.26.2420 584 NNTNALR|LL 0.084 . LmjF.26.2420 591 LLIYSVK|HQ 0.070 . LmjF.26.2420 598 HQIPELR|ER 0.081 . LmjF.26.2420 600 IPELRER|AI 0.126 . LmjF.26.2420 607 AISYVAR|NF 0.162 . LmjF.26.2420 614 NFSAMIR|ND 0.104 . LmjF.26.2420 636 AVVSLFR|TV 0.103 . ____________________________^_________________

  • Fasta :-

    >LmjF.26.2420 ATGGAATCGGTGGAGGCCGTGGAGCTCTTCTCGGAGCACAGCGCACGCTATCGCTACCGC GTGCCGGTGAGCGTGATTCGCGAGCTGCCTTACGAGGGGTCGCACTACAGCGCTGAGTTC AACGTTGGTGGCTGGTTCTGGCGCTTCCACATTCAAGAGCGATCCGCCGAGGCCCAGCGC TTCCTGGCGCTGCATCTTCAGAGCTGCACGCCGGGTGCTGTCTCTGTCCACTTCAAGCTC ACGGCCGTCTGCATGCGTGACCCGCTGCAGTCGCGCAGCAAGACGTTCAACTGCACCTTC AAGAAGGCCGGAAGTGCCTGGGGACTTCACCAGTTCATCGCGATCGAGCAACTGCTGCGC CCGGAGAGTGGGTTCGTGTACATGGTGCAGGAGACGGGCACCCGCTGCGTTGATTTCGAG GCGGTGCTGCAGGTGGACAACGGCAGCGGCAACGGGCGTGCACCGCCGGTGCGCAGCGCA ACCCGCTCCGTCACCCCGACCCGCAGCGTCGTTGGCGCCGGCGTTGCGGGAACGAATGGC GGACAGATATTGCCAAGCCGAGGCCCTAGCGTGCGGCCGGTCGGCAGGCGTGGCGGAGGC ACTCCGCTGGGACGGAGCGGTAGGATGTCGTACTCGCCTGGCCGAGTCGGCACCAGCGCA CTCGTCCCGATGGAGGGCAGTGTGGACCGGCCTGGCGCGAGTGCTGGGGCAGCGGTGCGT CGCGGCTTCTACAGCGATCCGAACGGTGGCCAGATGATGACCTTAGACAGCGCCTCCACC ATCGGCGGCGATGGCGGTGGCCGAGGAGCTGGGAGCGCCGTCGTGCGCGCACCGCTTGCG TATCCCTTTGCGCACTTGGAGATCCTGTGCGACATGAGCTTCGACGTCCAGGGCGTCCGC GTCAAGGCCCACCGCTGCGTGATTGGCGCGCGCATGCAGCCGCTGCTTCCCGAGCAGATG CTGCCGTTGCAGGTCGGCTGCATCGTCGCCATCGCCGTCCCCCTAGACGTCTTTACAACC TTCCTGCGGTACGTGTACACGGAAGAGTATCCTGAGTCGGGCGTTTTACCGCCAGAGTCG CTGCTTGACTTGTATCTACTTGCGGCGGCGTGCGAGTTCTACGACCTCGGCGCGGTCTGC ATCCGCTACGTTCGCCCGCTCCTGACGCCGGAGAACATTCTACCCATTGTGCTGACGCGC TACAACGCTGCGGACGAGGTACTCACCTCTCTCTACCTGCACGTGCTGCTGGACAACTAC GATATTCTCATCCAGGACCGGCAGTTCGAAGAGATTCCTGGCCACCTCTTCCGTCGTCTT TCGCTAATTCTTTACAGCAAGGAGACGGTGCCGAATGCGCTGATCCCACCCATGAAAAAC ACGCTGGGGAAGCAGCTTGCGTGGCTGGCGGAGTCGGGGGAGTACAGTGACTACGAGTGG GTGGTGGGGCCGCAGCAGTACGCGGTGCACGCCCACCGCTACATTCTCGCCTGCCGCTGT GTGCTGTTCTCGCAAGCGATGAACCCACGTAGCCCGGGACCGCTTCCGCCGTTCACCACC AACGAGTTCGACTTTTCCCTGCGTAGCTGGCAGAAGTTGTTGATGGGGATGTACCGTCGC CACCTTGACACCGCGCGCGACTTCTCGGCCGAGGACATTGCCATCATCTTCAAGATGCAG CAGGTGCTCATCATGGACGGCCAGCTGAAGCGCGAGGCGGATGAGGCGTTTAACAACACA AACGCCCTGCGCCTCCTCATCTACTCCGTGAAGCATCAAATACCGGAGCTACGCGAGCGT GCCATCAGCTACGTGGCGCGTAACTTCAGCGCGATGATCCGCAACGACTCACAGGCGTGG GAGCTGATTAGCGAGCTGCCGCAGGCGGCTGTGGTGTCGCTGTTCCGCACGGTGACGGAG CAACCACCGTTGTAG
  • Download Fasta

  • Fasta :-

    MESVEAVELFSEHSARYRYRVPVSVIRELPYEGSHYSAEFNVGGWFWRFHIQERSAEAQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLR PESGFVYMVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSVVGAGVAGTNG GQILPSRGPSVRPVGRRGGGTPLGRSGRMSYSPGRVGTSALVPMEGSVDRPGASAGAAVR RGFYSDPNGGQMMTLDSASTIGGDGGGRGAGSAVVRAPLAYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLGAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNALIPPMKNTLGKQLAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPPFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFNNTNALRLLIYSVKHQIPELRER AISYVARNFSAMIRNDSQAWELISELPQAAVVSLFRTVTEQPPL

    No Results
  • title: putative substrate binding site
  • coordinates: H65,A106,W107,G108
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.26.2420210 SSGRMSYSPG0.997unspLmjF.26.2420549 SARDFSAEDI0.998unsp

LmjF.26.2420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India