LmjF.26.2690 | CAAX prenyl protease 2, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LmjF.26.2690OTHER0.8224160.1730680.004516
No Results

  • Fasta :-

    >LmjF.26.2690 MDLLLCAGASAAFIAAFYVWPCERRFVFSGLQSLYAAARDPTVYVDRDSNEAIRRRTISF GMCCLVSGAYLAFGAAPPRTAHRQSSLLRPIIRSSVSTLLLFAGPIADACHQGTFDTPES TLRLWRNYVICPIGEELFYRGVLFSLLHRRSSPARIFVSAFLFSLSHMHHLVSMACDAYR NGEDKGVAGSDRDEKERACWRSAGHAMCGIVVFTALFGLLSGYYYEHVCERSIIAIAAAH ALCNAIGPPEFMVLRSRHCTVREKVASAAIYVAGIVGWAWTLWRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/2 Sequence name : 2 Sequence length : 285 VALUES OF COMPUTED PARAMETERS Coef20 : 4.582 CoefTot : 0.927 ChDiff : 7 ZoneTo : 39 KR : 3 DE : 2 CleavSite : 41 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.206 2.147 0.466 0.751 MesoH : 0.087 0.828 -0.113 0.336 MuHd_075 : 31.884 17.862 7.970 7.647 MuHd_095 : 31.561 20.981 8.751 7.507 MuHd_100 : 29.489 17.107 7.286 7.664 MuHd_105 : 20.185 14.566 5.554 5.958 Hmax_075 : 14.000 16.100 4.034 5.332 Hmax_095 : 12.162 15.225 2.898 4.506 Hmax_100 : 11.100 11.200 2.689 4.380 Hmax_105 : 4.100 13.883 4.069 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7833 0.2167 DFMC : 0.7407 0.2593
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 285 LmjF.26.2690 MDLLLCAGASAAFIAAFYVWPCERRFVFSGLQSLYAAARDPTVYVDRDSNEAIRRRTISFGMCCLVSGAYLAFGAAPPRT 80 AHRQSSLLRPIIRSSVSTLLLFAGPIADACHQGTFDTPESTLRLWRNYVICPIGEELFYRGVLFSLLHRRSSPARIFVSA 160 FLFSLSHMHHLVSMACDAYRNGEDKGVAGSDRDEKERACWRSAGHAMCGIVVFTALFGLLSGYYYEHVCERSIIAIAAAH 240 ALCNAIGPPEFMVLRSRHCTVREKVASAAIYVAGIVGWAWTLWRY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.26.2690 24 YVWPCER|RF 0.071 . LmjF.26.2690 25 VWPCERR|FV 0.270 . LmjF.26.2690 39 SLYAAAR|DP 0.103 . LmjF.26.2690 47 PTVYVDR|DS 0.110 . LmjF.26.2690 54 DSNEAIR|RR 0.083 . LmjF.26.2690 55 SNEAIRR|RT 0.124 . LmjF.26.2690 56 NEAIRRR|TI 0.191 . LmjF.26.2690 79 FGAAPPR|TA 0.110 . LmjF.26.2690 83 PPRTAHR|QS 0.106 . LmjF.26.2690 89 RQSSLLR|PI 0.105 . LmjF.26.2690 93 LLRPIIR|SS 0.114 . LmjF.26.2690 123 TPESTLR|LW 0.087 . LmjF.26.2690 126 STLRLWR|NY 0.172 . LmjF.26.2690 140 GEELFYR|GV 0.132 . LmjF.26.2690 149 LFSLLHR|RS 0.095 . LmjF.26.2690 150 FSLLHRR|SS 0.180 . LmjF.26.2690 155 RRSSPAR|IF 0.128 . LmjF.26.2690 180 MACDAYR|NG 0.107 . LmjF.26.2690 185 YRNGEDK|GV 0.107 . LmjF.26.2690 192 GVAGSDR|DE 0.093 . LmjF.26.2690 195 GSDRDEK|ER 0.094 . LmjF.26.2690 197 DRDEKER|AC 0.101 . LmjF.26.2690 201 KERACWR|SA 0.261 . LmjF.26.2690 231 YEHVCER|SI 0.177 . LmjF.26.2690 255 PEFMVLR|SR 0.102 . LmjF.26.2690 257 FMVLRSR|HC 0.081 . LmjF.26.2690 262 SRHCTVR|EK 0.120 . LmjF.26.2690 264 HCTVREK|VA 0.071 . LmjF.26.2690 284 WAWTLWR|Y- 0.098 . ____________________________^_________________

  • Fasta :-

    >LmjF.26.2690 ATGGACCTTCTCTTGTGCGCCGGCGCATCGGCCGCCTTCATCGCTGCCTTTTACGTCTGG CCGTGTGAGCGGCGCTTTGTTTTCTCAGGCTTGCAGTCGCTGTACGCCGCTGCACGCGAC CCAACCGTCTATGTCGATCGCGACAGCAATGAAGCGATTCGGAGACGCACAATCTCGTTT GGCATGTGCTGCCTTGTCAGTGGTGCCTACCTTGCATTCGGTGCGGCGCCGCCTCGTACC GCGCATCGGCAGAGCAGTTTGCTGCGTCCGATTATCCGTTCTTCGGTGTCGACACTGCTG CTGTTTGCGGGGCCCATCGCGGATGCGTGTCACCAGGGGACCTTCGACACCCCCGAGAGC ACGTTGCGGTTGTGGCGAAACTATGTGATCTGCCCGATTGGGGAAGAGCTGTTCTACCGC GGCGTTCTCTTCTCGCTTCTGCACCGCCGCTCCTCTCCAGCGCGTATTTTCGTTTCGGCC TTCCTCTTTTCGCTTTCCCACATGCACCACCTTGTTTCCATGGCTTGTGACGCGTACAGA AACGGCGAGGACAAAGGCGTGGCTGGTAGCGACCGCGACGAGAAAGAGCGTGCCTGCTGG CGCTCAGCGGGGCACGCCATGTGCGGCATCGTTGTCTTTACTGCGCTATTCGGCCTTCTC AGCGGGTACTATTATGAGCATGTGTGTGAGCGTAGCATTATCGCCATCGCTGCAGCCCAC GCCCTGTGCAATGCCATTGGTCCTCCCGAGTTTATGGTTCTGCGGAGCCGTCACTGCACT GTGCGTGAGAAGGTGGCAAGCGCAGCGATCTATGTCGCTGGTATCGTAGGATGGGCGTGG ACACTGTGGCGCTACTGA
  • Download Fasta

  • Fasta :-

    MDLLLCAGASAAFIAAFYVWPCERRFVFSGLQSLYAAARDPTVYVDRDSNEAIRRRTISF GMCCLVSGAYLAFGAAPPRTAHRQSSLLRPIIRSSVSTLLLFAGPIADACHQGTFDTPES TLRLWRNYVICPIGEELFYRGVLFSLLHRRSSPARIFVSAFLFSLSHMHHLVSMACDAYR NGEDKGVAGSDRDEKERACWRSAGHAMCGIVVFTALFGLLSGYYYEHVCERSIIAIAAAH ALCNAIGPPEFMVLRSRHCTVREKVASAAIYVAGIVGWAWTLWRY

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.26.2690190 SGVAGSDRDE0.996unspLmjF.26.2690190 SGVAGSDRDE0.996unspLmjF.26.2690190 SGVAGSDRDE0.996unspLmjF.26.2690260 TSRHCTVREK0.991unspLmjF.26.269049 SVDRDSNEAI0.996unspLmjF.26.2690152 SHRRSSPARI0.997unsp

LmjF.26.2690      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India