LmjF.27.0460 | Vasohibin, putative

  • Computed_GO_Component_IDs:  GO:0005737      

  • Computed_GO_Components:  cytoplasm      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0045765      

  • Computed_GO_Processes:  regulation of angiogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >LmjF.27.0460 MSDKVLAIVEQLSQQNPFHDQEDLPDPPRPSETAIPRDRPSAEQVPFIQKQISILSYNHL PRTFFSLEKHRSLQSILFTAKEVLCEALPIRCLEATFVALHYTQTLRDIDRIPLSFKSEA NGNFYRHIVLVLRTRSAPALYGALGLSRKPTLMYKPLAYHSLFDVVMDYKREYEALGHEL LDIKLGIAVTHDERSRYDPCWRFIALKLDHYRDGTKERSLKLSSTENHKPTSPRSLQTHA RKTSGHVANDSFSSSNGGPTALPPLSPGPPRVETSAHCINGDVSLERSAKAVCASHSETV APAYSEQFPPLSTCDSTLSPRKPTSSVSPSLTHPPSTTDAAVETYAPLAQLLSNYMRLLP TISEQYYKGIATVDNNNRALKLCFMDLDTAERDSGAENQRRLQLIGEMQSPLSAEAKRVA ANRTLKPPKRARGIAKNASGSGSSGAVGRRKTNKRAPLALLPSVGAADGKRAIPSVAVQP HRPPQVQPSLVAPDISYPSASLCTSRSAESERAASLSALLTGNSHISRPCMPFERIVIDA QNTGSSASPLCSRDGGTEGCTSPCDADPDSFSEDAFAAPPLTPRNYDERKPLSHYEPSLR STSSASDLFSTPFSLRAAAMCSPRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/457 Sequence name : 457 Sequence length : 625 VALUES OF COMPUTED PARAMETERS Coef20 : 3.314 CoefTot : 0.112 ChDiff : 10 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.700 1.394 0.059 0.390 MesoH : -0.365 0.321 -0.303 0.140 MuHd_075 : 9.135 5.697 3.266 2.089 MuHd_095 : 24.774 17.181 7.184 4.457 MuHd_100 : 24.601 18.464 7.347 4.398 MuHd_105 : 26.150 20.092 7.549 4.988 Hmax_075 : 2.625 7.000 -0.585 3.360 Hmax_095 : 8.837 11.200 0.537 3.937 Hmax_100 : 10.300 14.300 1.065 4.380 Hmax_105 : 11.000 14.300 1.239 4.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9863 0.0137 DFMC : 0.9872 0.0128
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 625 LmjF.27.0460 MSDKVLAIVEQLSQQNPFHDQEDLPDPPRPSETAIPRDRPSAEQVPFIQKQISILSYNHLPRTFFSLEKHRSLQSILFTA 80 KEVLCEALPIRCLEATFVALHYTQTLRDIDRIPLSFKSEANGNFYRHIVLVLRTRSAPALYGALGLSRKPTLMYKPLAYH 160 SLFDVVMDYKREYEALGHELLDIKLGIAVTHDERSRYDPCWRFIALKLDHYRDGTKERSLKLSSTENHKPTSPRSLQTHA 240 RKTSGHVANDSFSSSNGGPTALPPLSPGPPRVETSAHCINGDVSLERSAKAVCASHSETVAPAYSEQFPPLSTCDSTLSP 320 RKPTSSVSPSLTHPPSTTDAAVETYAPLAQLLSNYMRLLPTISEQYYKGIATVDNNNRALKLCFMDLDTAERDSGAENQR 400 RLQLIGEMQSPLSAEAKRVAANRTLKPPKRARGIAKNASGSGSSGAVGRRKTNKRAPLALLPSVGAADGKRAIPSVAVQP 480 HRPPQVQPSLVAPDISYPSASLCTSRSAESERAASLSALLTGNSHISRPCMPFERIVIDAQNTGSSASPLCSRDGGTEGC 560 TSPCDADPDSFSEDAFAAPPLTPRNYDERKPLSHYEPSLRSTSSASDLFSTPFSLRAAAMCSPRR 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.27.0460 4 ---MSDK|VL 0.067 . LmjF.27.0460 29 DLPDPPR|PS 0.091 . LmjF.27.0460 37 SETAIPR|DR 0.098 . LmjF.27.0460 39 TAIPRDR|PS 0.099 . LmjF.27.0460 50 QVPFIQK|QI 0.059 . LmjF.27.0460 62 SYNHLPR|TF 0.116 . LmjF.27.0460 69 TFFSLEK|HR 0.057 . LmjF.27.0460 71 FSLEKHR|SL 0.154 . LmjF.27.0460 81 SILFTAK|EV 0.065 . LmjF.27.0460 91 CEALPIR|CL 0.107 . LmjF.27.0460 107 HYTQTLR|DI 0.111 . LmjF.27.0460 111 TLRDIDR|IP 0.073 . LmjF.27.0460 117 RIPLSFK|SE 0.072 . LmjF.27.0460 126 ANGNFYR|HI 0.116 . LmjF.27.0460 133 HIVLVLR|TR 0.068 . LmjF.27.0460 135 VLVLRTR|SA 0.118 . LmjF.27.0460 148 GALGLSR|KP 0.064 . LmjF.27.0460 149 ALGLSRK|PT 0.075 . LmjF.27.0460 155 KPTLMYK|PL 0.058 . LmjF.27.0460 170 DVVMDYK|RE 0.061 . LmjF.27.0460 171 VVMDYKR|EY 0.191 . LmjF.27.0460 184 HELLDIK|LG 0.058 . LmjF.27.0460 194 AVTHDER|SR 0.076 . LmjF.27.0460 196 THDERSR|YD 0.079 . LmjF.27.0460 202 RYDPCWR|FI 0.104 . LmjF.27.0460 207 WRFIALK|LD 0.062 . LmjF.27.0460 212 LKLDHYR|DG 0.113 . LmjF.27.0460 216 HYRDGTK|ER 0.062 . LmjF.27.0460 218 RDGTKER|SL 0.137 . LmjF.27.0460 221 TKERSLK|LS 0.171 . LmjF.27.0460 229 SSTENHK|PT 0.064 . LmjF.27.0460 234 HKPTSPR|SL 0.175 . LmjF.27.0460 241 SLQTHAR|KT 0.148 . LmjF.27.0460 242 LQTHARK|TS 0.109 . LmjF.27.0460 271 LSPGPPR|VE 0.077 . LmjF.27.0460 287 GDVSLER|SA 0.170 . LmjF.27.0460 290 SLERSAK|AV 0.352 . LmjF.27.0460 321 DSTLSPR|KP 0.075 . LmjF.27.0460 322 STLSPRK|PT 0.087 . LmjF.27.0460 357 LLSNYMR|LL 0.106 . LmjF.27.0460 368 ISEQYYK|GI 0.075 . LmjF.27.0460 378 TVDNNNR|AL 0.086 . LmjF.27.0460 381 NNNRALK|LC 0.143 . LmjF.27.0460 392 DLDTAER|DS 0.100 . LmjF.27.0460 400 SGAENQR|RL 0.092 . LmjF.27.0460 401 GAENQRR|LQ 0.168 . LmjF.27.0460 417 PLSAEAK|RV 0.096 . LmjF.27.0460 418 LSAEAKR|VA 0.157 . LmjF.27.0460 423 KRVAANR|TL 0.098 . LmjF.27.0460 426 AANRTLK|PP 0.116 . LmjF.27.0460 429 RTLKPPK|RA 0.070 . LmjF.27.0460 430 TLKPPKR|AR 0.237 . LmjF.27.0460 432 KPPKRAR|GI 0.157 . LmjF.27.0460 436 RARGIAK|NA 0.120 . LmjF.27.0460 449 SSGAVGR|RK 0.101 . LmjF.27.0460 450 SGAVGRR|KT 0.137 . LmjF.27.0460 451 GAVGRRK|TN 0.081 . LmjF.27.0460 454 GRRKTNK|RA 0.079 . LmjF.27.0460 455 RRKTNKR|AP 0.228 . LmjF.27.0460 470 VGAADGK|RA 0.071 . LmjF.27.0460 471 GAADGKR|AI 0.187 . LmjF.27.0460 482 VAVQPHR|PP 0.083 . LmjF.27.0460 506 ASLCTSR|SA 0.187 . LmjF.27.0460 512 RSAESER|AA 0.127 . LmjF.27.0460 528 GNSHISR|PC 0.136 . LmjF.27.0460 535 PCMPFER|IV 0.169 . LmjF.27.0460 553 ASPLCSR|DG 0.135 . LmjF.27.0460 584 APPLTPR|NY 0.083 . LmjF.27.0460 589 PRNYDER|KP 0.077 . LmjF.27.0460 590 RNYDERK|PL 0.140 . LmjF.27.0460 600 HYEPSLR|ST 0.129 . LmjF.27.0460 616 STPFSLR|AA 0.084 . LmjF.27.0460 624 AAMCSPR|R- 0.092 . LmjF.27.0460 625 AMCSPRR|-- 0.128 . ____________________________^_________________

  • Fasta :-

    >LmjF.27.0460 ATGTCGGATAAAGTGCTGGCCATTGTGGAGCAGCTGAGTCAGCAGAACCCTTTTCATGAC CAGGAAGACTTACCAGACCCTCCGCGGCCAAGCGAGACGGCCATTCCTCGCGATCGCCCT TCCGCGGAGCAGGTCCCATTCATTCAGAAGCAGATTAGCATTCTCAGCTACAACCACCTG CCCCGCACCTTCTTCTCCTTAGAGAAACACCGCTCGCTGCAGAGCATCCTGTTTACGGCA AAGGAGGTGCTGTGCGAGGCACTGCCCATCCGCTGCCTGGAGGCGACCTTTGTGGCACTG CACTACACCCAGACGCTGCGCGACATCGACCGCATTCCGCTCTCCTTCAAGTCGGAGGCG AACGGCAACTTCTACCGCCACATCGTCCTCGTCCTCCGCACCCGCTCCGCTCCAGCCCTC TACGGTGCCCTCGGCCTCAGCCGCAAGCCTACGCTCATGTACAAGCCACTAGCGTATCAC TCCCTCTTTGATGTAGTGATGGACTACAAGCGCGAGTACGAGGCCCTCGGGCACGAGCTG CTTGACATAAAGCTGGGTATCGCCGTCACACACGATGAGCGCAGTCGCTATGACCCATGC TGGCGTTTCATTGCCCTCAAACTTGACCACTACCGCGACGGCACCAAGGAAAGATCACTG AAGCTCTCGTCGACGGAGAACCACAAACCGACTTCGCCACGCTCGTTGCAAACGCACGCA CGCAAGACCAGCGGCCACGTGGCCAACGACTCGTTCTCTTCCTCAAACGGCGGTCCGACC GCGCTGCCACCGCTCAGCCCAGGTCCGCCTCGCGTAGAGACCTCCGCGCACTGCATCAAC GGGGACGTGTCGTTAGAGCGCTCGGCGAAAGCTGTGTGCGCCTCGCACAGCGAGACGGTG GCGCCTGCATATTCAGAGCAATTCCCTCCGCTGAGCACATGCGACTCCACCTTGTCGCCG CGAAAGCCAACTTCTAGTGTGTCGCCTTCGCTTACGCATCCGCCGAGCACGACAGACGCG GCTGTCGAGACGTACGCGCCACTGGCGCAGCTGCTGAGCAACTACATGCGACTCCTTCCC ACCATCAGCGAGCAGTACTACAAGGGCATCGCAACTGTGGACAACAACAACAGAGCACTC AAGCTGTGCTTCATGGACCTCGATACAGCGGAAAGGGACTCCGGTGCGGAGAACCAGCGC CGACTGCAGCTCATCGGCGAGATGCAGTCCCCGCTGAGCGCGGAGGCAAAGCGGGTGGCG GCCAACCGAACGTTGAAGCCACCCAAAAGGGCTAGGGGCATCGCGAAGAACGCGAGCGGC AGTGGCAGCAGCGGCGCTGTCGGCCGCCGAAAAACGAACAAGCGCGCCCCTCTTGCGTTG CTGCCCTCCGTTGGTGCGGCGGATGGCAAGAGGGCTATCCCGTCGGTGGCGGTGCAGCCC CACCGCCCCCCTCAGGTGCAGCCTTCGTTGGTGGCGCCGGACATTTCTTACCCGTCCGCG TCACTTTGCACGTCGCGTTCTGCGGAGTCGGAGCGCGCCGCGTCCCTCTCTGCTCTTTTG ACGGGCAACAGCCATATCTCTCGCCCATGCATGCCCTTTGAGCGGATCGTGATAGACGCG CAGAATACCGGCAGCTCAGCCTCGCCGCTGTGCAGCCGGGATGGCGGGACGGAAGGGTGC ACGAGTCCGTGCGATGCCGATCCTGACAGCTTCTCTGAGGATGCCTTTGCGGCTCCGCCC CTCACGCCGCGCAACTACGATGAGCGGAAGCCGCTTTCCCACTATGAGCCGTCCCTACGC TCCACATCATCGGCAAGCGACCTCTTTTCCACGCCCTTCTCGCTGAGAGCTGCCGCCATG TGCTCACCACGCCGGTAG
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.27.0460223 SSLKLSSTEN0.993unspLmjF.27.0460223 SSLKLSSTEN0.993unspLmjF.27.0460223 SSLKLSSTEN0.993unspLmjF.27.0460224 SLKLSSTENH0.995unspLmjF.27.0460232 SHKPTSPRSL0.991unspLmjF.27.0460284 SNGDVSLERS0.995unspLmjF.27.0460336 STHPPSTTDA0.993unspLmjF.27.0460394 SAERDSGAEN0.997unspLmjF.27.0460413 SQSPLSAEAK0.994unspLmjF.27.0460452 TGRRKTNKRA0.991unspLmjF.27.0460510 SRSAESERAA0.994unspLmjF.27.0460562 SEGCTSPCDA0.998unspLmjF.27.0460570 SADPDSFSED0.99unspLmjF.27.0460593 SRKPLSHYEP0.996unspLmjF.27.046041 SRDRPSAEQV0.993unspLmjF.27.0460195 SHDERSRYDP0.997unsp

LmjF.27.0460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India