LmjF.27.2660 | peptidyl dipeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.27.2660OTHER0.9999050.0000300.000065
No Results

  • Fasta :-

    >LmjF.27.2660 MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVA LERSGAQLKRARLVFQNLCSAHTNPEMQNLEQAYAPKFSVHTDKIYLDGALYNRIKAVWD ERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNERLATLESDFAKKVMGTRKTA SLVVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRAARGDENDTSAIIVEIAQLRLKKAKLLGRKCFAEWQLQNQMADPASAEALLRDM GNAAASKAKKEAADIKQMIREEGGDFELAPWDWRYYAERVRKQRYDLDENETKPYFELNN VLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCTGESLAIFCLDPYARASKRGG AWMTFYVRQSSLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK YSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYALHYETKEPIPQALVDRMKAAETYGA GFHTIEVVKAAYLDLCWHLVAEETAFLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTF SGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKANMKAFLRINGLLDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/763 Sequence name : 763 Sequence length : 678 VALUES OF COMPUTED PARAMETERS Coef20 : 2.827 CoefTot : -1.431 ChDiff : -14 ZoneTo : 19 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.724 1.182 0.010 0.452 MesoH : -0.324 0.169 -0.384 0.236 MuHd_075 : 18.563 16.500 4.788 4.332 MuHd_095 : 13.165 10.268 5.512 3.190 MuHd_100 : 8.760 7.119 4.553 2.281 MuHd_105 : 7.180 8.128 3.003 1.741 Hmax_075 : 7.875 5.337 -1.054 3.150 Hmax_095 : 6.388 2.888 -0.011 2.590 Hmax_100 : 6.700 4.100 0.106 3.140 Hmax_105 : 4.083 4.083 -1.016 2.228 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9815 0.0185 DFMC : 0.9738 0.0262
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 678 LmjF.27.2660 MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVALERSGAQLKRARLVFQNLCS 80 AHTNPEMQNLEQAYAPKFSVHTDKIYLDGALYNRIKAVWDERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNE 160 RLATLESDFAKKVMGTRKTASLVVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF 240 EASVQRAARGDENDTSAIIVEIAQLRLKKAKLLGRKCFAEWQLQNQMADPASAEALLRDMGNAAASKAKKEAADIKQMIR 320 EEGGDFELAPWDWRYYAERVRKQRYDLDENETKPYFELNNVLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCT 400 GESLAIFCLDPYARASKRGGAWMTFYVRQSSLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK 480 YSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYALHYETKEPIPQALVDRMKAAETYGAGFHTIEVVKAAYLDLCWHLV 560 AEETAFLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTFSGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLR 640 ACVLSVGNSVDANVAYEKFAGRKANMKAFLRINGLLDE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.27.2660 46 AEIEAIK|SN 0.075 . LmjF.27.2660 63 TVVALER|SG 0.110 . LmjF.27.2660 69 RSGAQLK|RA 0.067 . LmjF.27.2660 70 SGAQLKR|AR 0.148 . LmjF.27.2660 72 AQLKRAR|LV 0.140 . LmjF.27.2660 97 EQAYAPK|FS 0.067 . LmjF.27.2660 104 FSVHTDK|IY 0.067 . LmjF.27.2660 114 DGALYNR|IK 0.067 . LmjF.27.2660 116 ALYNRIK|AV 0.098 . LmjF.27.2660 122 KAVWDER|AS 0.095 . LmjF.27.2660 131 LAGEDLR|LV 0.137 . LmjF.27.2660 138 LVEHYER|EF 0.085 . LmjF.27.2660 141 HYEREFR|KA 0.488 . LmjF.27.2660 142 YEREFRK|AG 0.083 . LmjF.27.2660 152 GLHDADK|EK 0.063 . LmjF.27.2660 154 HDADKEK|LK 0.070 . LmjF.27.2660 156 ADKEKLK|QV 0.093 . LmjF.27.2660 161 LKQVNER|LA 0.100 . LmjF.27.2660 171 LESDFAK|KV 0.120 . LmjF.27.2660 172 ESDFAKK|VM 0.092 . LmjF.27.2660 177 KKVMGTR|KT 0.077 . LmjF.27.2660 178 KVMGTRK|TA 0.113 . LmjF.27.2660 213 SLGHPGK|YA 0.096 . LmjF.27.2660 231 PLLASLR|SR 0.103 . LmjF.27.2660 233 LASLRSR|ET 0.112 . LmjF.27.2660 236 LRSRETR|RR 0.219 . LmjF.27.2660 237 RSRETRR|RL 0.144 . LmjF.27.2660 238 SRETRRR|LF 0.185 . LmjF.27.2660 246 FEASVQR|AA 0.130 . LmjF.27.2660 249 SVQRAAR|GD 0.337 . LmjF.27.2660 266 VEIAQLR|LK 0.080 . LmjF.27.2660 268 IAQLRLK|KA 0.058 . LmjF.27.2660 269 AQLRLKK|AK 0.239 . LmjF.27.2660 271 LRLKKAK|LL 0.094 . LmjF.27.2660 275 KAKLLGR|KC 0.082 . LmjF.27.2660 276 AKLLGRK|CF 0.068 . LmjF.27.2660 298 SAEALLR|DM 0.125 . LmjF.27.2660 307 GNAAASK|AK 0.065 . LmjF.27.2660 309 AAASKAK|KE 0.076 . LmjF.27.2660 310 AASKAKK|EA 0.188 . LmjF.27.2660 316 KEAADIK|QM 0.075 . LmjF.27.2660 320 DIKQMIR|EE 0.079 . LmjF.27.2660 334 LAPWDWR|YY 0.077 . LmjF.27.2660 339 WRYYAER|VR 0.079 . LmjF.27.2660 341 YYAERVR|KQ 0.073 . LmjF.27.2660 342 YAERVRK|QR 0.180 . LmjF.27.2660 344 ERVRKQR|YD 0.353 . LmjF.27.2660 353 LDENETK|PY 0.064 . LmjF.27.2660 364 LNNVLER|GV 0.119 . LmjF.27.2660 372 VFYTAAK|LY 0.064 . LmjF.27.2660 379 LYGVTMR|RR 0.085 . LmjF.27.2660 380 YGVTMRR|RT 0.091 . LmjF.27.2660 381 GVTMRRR|TD 0.104 . LmjF.27.2660 414 CLDPYAR|AS 0.111 . LmjF.27.2660 417 PYARASK|RG 0.114 . LmjF.27.2660 418 YARASKR|GG 0.204 . LmjF.27.2660 428 WMTFYVR|QS 0.072 . LmjF.27.2660 436 SSLLGQK|PV 0.062 . LmjF.27.2660 447 NVLNIVK|PA 0.066 . LmjF.27.2660 452 VKPAEGK|PT 0.059 . LmjF.27.2660 458 KPTLLSR|SD 0.132 . LmjF.27.2660 480 GMLSNLK|YS 0.059 . LmjF.27.2660 491 SGTSVAR|DF 0.106 . LmjF.27.2660 512 MYDAVLK|NY 0.056 . LmjF.27.2660 521 ALHYETK|EP 0.068 . LmjF.27.2660 531 PQALVDR|MK 0.097 . LmjF.27.2660 533 ALVDRMK|AA 0.094 . LmjF.27.2660 549 HTIEVVK|AA 0.070 . LmjF.27.2660 578 MEEAAMR|SF 0.214 . LmjF.27.2660 590 MTEVPPR|YH 0.162 . LmjF.27.2660 615 YVYQWAR|VL 0.088 . LmjF.27.2660 633 ENGGLTR|EN 0.116 . LmjF.27.2660 640 ENGDHLR|AC 0.082 . LmjF.27.2660 658 ANVAYEK|FA 0.089 . LmjF.27.2660 662 YEKFAGR|KA 0.086 . LmjF.27.2660 663 EKFAGRK|AN 0.086 . LmjF.27.2660 667 GRKANMK|AF 0.068 . LmjF.27.2660 671 NMKAFLR|IN 0.080 . ____________________________^_________________

  • Fasta :-

    >LmjF.27.2660 ATGTCCGCCAACCCGCTGCTTCAGCAGAGCCCTCTGCAGTACCAACACCCGCCCTTTGAC CAGATCACCATGGAGCACTACGCACCCGCTTTCGAGCAGGGCATGGCGGAGCAGATGGCG GAGATCGAGGCGATCAAGTCCAACCCTGACGCGCCCACCCTTGAAAACACAGTGGTGGCA CTGGAGCGGAGCGGGGCGCAGCTTAAGCGCGCACGCCTGGTCTTCCAAAACCTCTGCTCT GCACACACGAACCCGGAGATGCAAAATCTCGAGCAGGCCTACGCCCCAAAGTTCTCCGTC CACACAGACAAGATCTACCTCGATGGTGCCTTGTACAACCGCATCAAGGCCGTGTGGGAC GAGCGTGCCAGTCTCGCTGGTGAAGACTTGCGGCTGGTGGAACACTACGAGAGGGAGTTT CGCAAGGCCGGCGCCGGCCTTCACGACGCAGACAAGGAGAAGCTGAAACAGGTAAATGAG CGCCTCGCTACCCTCGAGAGTGATTTTGCCAAGAAGGTGATGGGCACGCGCAAGACCGCC TCGCTCGTCGTGGATAACGTTGCCGAGCTGGAGGGCCTCAGCGAGGACGAGATCGCGACG GCTCAGATGGAGGCGGAGAGCCTCGGCCACCCCGGAAAGTACGCATTGATTATCGTGAAC ACGACTCAGCAGCCACTGCTAGCGTCTCTGAGGAGCCGCGAGACGCGCCGCCGCCTGTTC GAGGCGAGCGTGCAGCGCGCCGCACGCGGTGACGAGAATGACACGAGCGCCATCATCGTG GAGATTGCGCAGCTGCGGCTGAAGAAGGCGAAGCTGCTCGGCAGGAAGTGCTTTGCGGAG TGGCAGCTGCAGAACCAGATGGCCGACCCGGCGTCCGCGGAGGCCTTGCTGCGCGATATG GGCAATGCGGCGGCGTCGAAGGCGAAGAAGGAAGCGGCTGACATCAAGCAGATGATTCGC GAGGAGGGTGGGGACTTTGAGCTGGCGCCCTGGGACTGGAGGTACTACGCGGAGCGAGTG CGCAAGCAGCGGTACGACCTCGACGAGAACGAGACGAAGCCGTACTTTGAGCTAAACAAC GTGCTTGAGCGGGGCGTGTTCTACACGGCGGCAAAACTGTACGGCGTGACGATGCGGCGG CGCACGGATCTGCCGGTGTACCACCCCGACGTGCTGTCGTTTGAGATGTTTGACTGCACG GGTGAGTCTCTTGCCATTTTCTGCCTTGACCCCTACGCGCGCGCAAGCAAGCGCGGTGGT GCGTGGATGACCTTCTATGTTCGCCAGAGCTCCCTCCTTGGCCAGAAGCCGGTCGTGTAC AATGTGCTCAACATTGTGAAGCCGGCTGAAGGCAAGCCGACCTTGCTGAGCCGCAGTGAC GTGACGACGCTCTTCCATGAGTTCGGCCACGGACTGCACGGCATGCTAAGCAACCTCAAG TACTCGACTCTTTCCGGCACAAGTGTCGCCCGCGACTTCCTCGAGTTTCCATCGCAGATC AACGAGCACTGGGCAATGTACGACGCCGTGTTGAAGAACTACGCCCTTCACTACGAAACC AAGGAGCCGATCCCGCAGGCACTGGTGGATCGCATGAAGGCGGCCGAGACATACGGCGCC GGCTTCCACACCATTGAGGTGGTCAAGGCGGCGTACCTCGATCTCTGCTGGCACCTGGTT GCGGAGGAAACGGCTTTTCTACCACCGGCACAGATGGAGGAGGCGGCGATGAGGTCCTTC GGTGTTGGGATGACCGAAGTGCCGCCGCGCTACCACAGCGGGTACTTCATGCACACTTTC TCTGGCGGATATGCCTCGAACTACTACGTGTACCAGTGGGCGCGTGTGCTGGACTGCGAC GGGTTCGAGTGGTTCCTGGAGAACGGCGGGCTGACGCGCGAGAACGGTGACCACCTGCGT GCGTGCGTGCTCTCTGTGGGCAACTCGGTGGACGCGAACGTTGCGTACGAGAAGTTTGCC GGCCGCAAGGCAAACATGAAGGCGTTCCTGCGCATCAACGGCCTGCTGGACGAATAG
  • Download Fasta

  • Fasta :-

    MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVA LERSGAQLKRARLVFQNLCSAHTNPEMQNLEQAYAPKFSVHTDKIYLDGALYNRIKAVWD ERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNERLATLESDFAKKVMGTRKTA SLVVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRAARGDENDTSAIIVEIAQLRLKKAKLLGRKCFAEWQLQNQMADPASAEALLRDM GNAAASKAKKEAADIKQMIREEGGDFELAPWDWRYYAERVRKQRYDLDENETKPYFELNN VLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCTGESLAIFCLDPYARASKRGG AWMTFYVRQSSLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK YSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYALHYETKEPIPQALVDRMKAAETYGA GFHTIEVVKAAYLDLCWHLVAEETAFLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTF SGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKANMKAFLRINGLLDE

  • title: Zn binding site
  • coordinates: H466,H470,E495
No Results
No Results
IDSitePeptideScoreMethod
LmjF.27.2660416 SYARASKRGG0.995unsp

LmjF.27.2660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India