LmjF.29.2240 | Aminopeptidase M1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.29.2240OTHER0.9997420.0001230.000134
No Results

  • Fasta :-

    >LmjF.29.2240 MSMTKSVKLENPYVPSGYHLRVAVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIE VTSVKGATLERRDDTAHTLVLKLDAETMALADPTLHFEFTHVIQKELRGFYQVNFKHNGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNGPLKSKTVEGDT VVHAFQTVPRCPPYLTACVVGELEHISTVVKGIPVSVYATLGKVGRAQFALSITVFALEF FEKFFQCKYPLPKLDVVAVPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLGDRWESAVAHYIRKHQFGDTK TAQLWEALEESSQLPITEALTSFTTQMGYPIIHVARKDENTIVVTQEACRFVTASEKSMR TWCVPLVVEGIDAAAGRATPMLRGDKPMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAI FDAWLANYSQLSPADRRSLFSDTLAAIRIGYDDIPRLARIAKAVSAFEKDIYVLREYMQT MGTFLRSFDDTSLTKSLNKELHGFLTPVAESFIGVSPQDDNASLRRNFYLDASISTLLNS WEPAEVSAHPVIQWALQQAQGFLSGEGFNAGTLSSCLRAWVRMTDPADLPARNAQLYAKL QEVDGNEELCRSLVVAMTSGASVDFALGIMKKCIENDGVRSQYGGQVFWSLASNPAISGA EVWQAFQNNFDAVKAQWGGGQFRIQAIVSFLGEALSGDAAADEFETFFETHPLPNARLAI GRAAEELRIRSWLNKKWKASLPHVFCCH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/36 Sequence name : 36 Sequence length : 868 VALUES OF COMPUTED PARAMETERS Coef20 : 3.325 CoefTot : -1.046 ChDiff : -20 ZoneTo : 24 KR : 3 DE : 1 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.659 0.202 0.603 MesoH : 0.010 0.758 -0.188 0.345 MuHd_075 : 15.786 10.074 4.812 4.395 MuHd_095 : 11.312 11.002 4.814 3.656 MuHd_100 : 17.732 15.903 7.030 4.770 MuHd_105 : 21.735 17.913 7.362 5.334 Hmax_075 : -0.200 8.200 -2.371 4.040 Hmax_095 : 1.663 3.063 -1.162 2.170 Hmax_100 : 4.100 4.300 -1.209 2.660 Hmax_105 : 3.617 3.400 -0.997 2.462 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9861 0.0139 DFMC : 0.9656 0.0344
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 868 LmjF.29.2240 MSMTKSVKLENPYVPSGYHLRVAVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIEVTSVKGATLERRDDTAHTLV 80 LKLDAETMALADPTLHFEFTHVIQKELRGFYQVNFKHNGKQHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSE 160 EHYVVLSNGPLKSKTVEGDTVVHAFQTVPRCPPYLTACVVGELEHISTVVKGIPVSVYATLGKVGRAQFALSITVFALEF 240 FEKFFQCKYPLPKLDVVAVPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCHEVSHNWFGNLVAINWWEGLW 320 LKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIYEHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLG 400 DRWESAVAHYIRKHQFGDTKTAQLWEALEESSQLPITEALTSFTTQMGYPIIHVARKDENTIVVTQEACRFVTASEKSMR 480 TWCVPLVVEGIDAAAGRATPMLRGDKPMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAIFDAWLANYSQLSPADRRSLF 560 SDTLAAIRIGYDDIPRLARIAKAVSAFEKDIYVLREYMQTMGTFLRSFDDTSLTKSLNKELHGFLTPVAESFIGVSPQDD 640 NASLRRNFYLDASISTLLNSWEPAEVSAHPVIQWALQQAQGFLSGEGFNAGTLSSCLRAWVRMTDPADLPARNAQLYAKL 720 QEVDGNEELCRSLVVAMTSGASVDFALGIMKKCIENDGVRSQYGGQVFWSLASNPAISGAEVWQAFQNNFDAVKAQWGGG 800 QFRIQAIVSFLGEALSGDAAADEFETFFETHPLPNARLAIGRAAEELRIRSWLNKKWKASLPHVFCCH 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.29.2240 5 --MSMTK|SV 0.089 . LmjF.29.2240 8 SMTKSVK|LE 0.063 . LmjF.29.2240 21 PSGYHLR|VA 0.094 . LmjF.29.2240 41 ETVHLQR|CP 0.068 . LmjF.29.2240 65 IEVTSVK|GA 0.074 . LmjF.29.2240 71 KGATLER|RD 0.082 . LmjF.29.2240 72 GATLERR|DD 0.156 . LmjF.29.2240 82 AHTLVLK|LD 0.054 . LmjF.29.2240 105 FTHVIQK|EL 0.060 . LmjF.29.2240 108 VIQKELR|GF 0.105 . LmjF.29.2240 116 FYQVNFK|HN 0.083 . LmjF.29.2240 120 NFKHNGK|QH 0.063 . LmjF.29.2240 123 HNGKQHR|MA 0.200 . LmjF.29.2240 135 FEPVSAR|LF 0.085 . LmjF.29.2240 147 HDEPAQR|AD 0.088 . LmjF.29.2240 158 LTVTLPK|SE 0.076 . LmjF.29.2240 172 LSNGPLK|SK 0.102 . LmjF.29.2240 174 NGPLKSK|TV 0.071 . LmjF.29.2240 190 AFQTVPR|CP 0.081 . LmjF.29.2240 211 HISTVVK|GI 0.076 . LmjF.29.2240 223 VYATLGK|VG 0.061 . LmjF.29.2240 226 TLGKVGR|AQ 0.107 . LmjF.29.2240 243 ALEFFEK|FF 0.067 . LmjF.29.2240 248 EKFFQCK|YP 0.075 . LmjF.29.2240 253 CKYPLPK|LD 0.064 . LmjF.29.2240 291 QSSVEAK|RG 0.081 . LmjF.29.2240 292 SSVEAKR|GT 0.263 . LmjF.29.2240 322 WEGLWLK|EG 0.059 . LmjF.29.2240 387 DSISYNK|GM 0.070 . LmjF.29.2240 402 QAFLGDR|WE 0.084 . LmjF.29.2240 412 AVAHYIR|KH 0.082 . LmjF.29.2240 413 VAHYIRK|HQ 0.087 . LmjF.29.2240 420 HQFGDTK|TA 0.067 . LmjF.29.2240 456 PIIHVAR|KD 0.101 . LmjF.29.2240 457 IIHVARK|DE 0.126 . LmjF.29.2240 470 VTQEACR|FV 0.178 . LmjF.29.2240 477 FVTASEK|SM 0.064 . LmjF.29.2240 480 ASEKSMR|TW 0.104 . LmjF.29.2240 497 IDAAAGR|AT 0.102 . LmjF.29.2240 503 RATPMLR|GD 0.103 . LmjF.29.2240 506 PMLRGDK|PM 0.104 . LmjF.29.2240 518 LPAGIAK|GA 0.102 . LmjF.29.2240 527 FANANPR|RT 0.093 . LmjF.29.2240 528 ANANPRR|TG 0.115 . LmjF.29.2240 533 RRTGFYR|CR 0.095 . LmjF.29.2240 535 TGFYRCR|YD 0.121 . LmjF.29.2240 556 QLSPADR|RS 0.081 . LmjF.29.2240 557 LSPADRR|SL 0.159 . LmjF.29.2240 568 DTLAAIR|IG 0.068 . LmjF.29.2240 576 GYDDIPR|LA 0.081 . LmjF.29.2240 579 DIPRLAR|IA 0.274 . LmjF.29.2240 582 RLARIAK|AV 0.450 . LmjF.29.2240 589 AVSAFEK|DI 0.092 . LmjF.29.2240 595 KDIYVLR|EY 0.104 . LmjF.29.2240 606 TMGTFLR|SF 0.153 . LmjF.29.2240 615 DDTSLTK|SL 0.085 . LmjF.29.2240 619 LTKSLNK|EL 0.063 . LmjF.29.2240 645 DDNASLR|RN 0.088 . LmjF.29.2240 646 DNASLRR|NF 0.097 . LmjF.29.2240 698 TLSSCLR|AW 0.100 . LmjF.29.2240 702 CLRAWVR|MT 0.104 . LmjF.29.2240 712 PADLPAR|NA 0.083 . LmjF.29.2240 719 NAQLYAK|LQ 0.067 . LmjF.29.2240 731 GNEELCR|SL 0.144 . LmjF.29.2240 751 FALGIMK|KC 0.054 . LmjF.29.2240 752 ALGIMKK|CI 0.109 . LmjF.29.2240 760 IENDGVR|SQ 0.124 . LmjF.29.2240 794 NNFDAVK|AQ 0.064 . LmjF.29.2240 803 WGGGQFR|IQ 0.083 . LmjF.29.2240 837 HPLPNAR|LA 0.103 . LmjF.29.2240 842 ARLAIGR|AA 0.121 . LmjF.29.2240 848 RAAEELR|IR 0.086 . LmjF.29.2240 850 AEELRIR|SW 0.095 . LmjF.29.2240 855 IRSWLNK|KW 0.103 . LmjF.29.2240 856 RSWLNKK|WK 0.086 . LmjF.29.2240 858 WLNKKWK|AS 0.080 . ____________________________^_________________

  • Fasta :-

    >LmjF.29.2240 ATGTCGATGACAAAGAGCGTCAAACTGGAGAACCCGTATGTGCCCTCCGGGTATCACCTG CGCGTCGCGGTGGATCTTTCCACGTGGAGCTACACAGCGGTGGAGACGGTGCACCTGCAG CGCTGTCCTGCCTTCCCAGACGGCGACACGATCCAGCTGCATGCAGCCCCGTCGATCGAG GTGACGTCAGTGAAGGGCGCCACTTTGGAACGGCGCGACGACACGGCGCACACGCTTGTG CTGAAGCTGGACGCGGAGACGATGGCGTTGGCAGACCCGACGCTGCACTTCGAGTTCACG CATGTAATCCAAAAGGAGCTGCGCGGCTTCTACCAGGTGAACTTCAAGCATAACGGGAAG CAGCACCGCATGGCCTCCACACACTTCGAGCCCGTGTCAGCGCGACTCTTCTACATCTGC CACGACGAACCCGCGCAGCGCGCGGATTTCACGCTGACCGTGACGCTCCCCAAGTCGGAG GAGCACTACGTCGTCCTTTCTAACGGTCCTCTGAAGTCGAAGACGGTGGAAGGGGACACC GTGGTGCACGCCTTCCAAACGGTGCCCAGGTGCCCGCCGTATCTGACAGCCTGCGTTGTT GGTGAGCTGGAGCACATCAGCACCGTCGTCAAGGGCATCCCGGTCAGCGTGTACGCGACG CTGGGCAAGGTGGGACGGGCGCAGTTTGCCCTCAGCATCACCGTGTTCGCTCTCGAGTTC TTTGAGAAGTTCTTCCAGTGCAAGTACCCACTACCTAAGCTGGACGTCGTTGCCGTTCCC GACTTTCCGATCGGTGGGATGGAGAACTGGGGCTGCATCACGTGCGCTGAGGCCATACTG GTGGACCCGCAGCAGTCGAGCGTGGAGGCGAAGCGCGGCACGTCGAACCTGGTATGCCAC GAAGTCTCGCACAACTGGTTTGGTAACCTTGTTGCCATCAACTGGTGGGAGGGTCTGTGG CTCAAGGAGGGCTTTGCGTCGTGGTGCGGCTACCACGCGACGCACGCGTACGCGCCACAG TGGAACGCTTTGGACGCTGCGGCGCTGCAGGTGGTGTCGGCGCTGAACGACGACATATAC GAGCACAGTCACCCCGTTGAGGTGCCCATCCACGATCCCGGAGATATTACCCAGATCTTC GACAGTATCAGCTACAACAAGGGCATGGGCCTGGTTTTCATGCTGCAGGCGTTTCTTGGC GACAGGTGGGAATCTGCCGTCGCACACTACATCAGAAAGCACCAATTCGGGGACACTAAA ACGGCGCAACTGTGGGAGGCGCTCGAGGAGTCGTCGCAGCTGCCCATCACCGAGGCCCTC ACCAGCTTTACCACGCAGATGGGCTACCCAATCATCCACGTGGCCAGAAAGGACGAGAAC ACCATTGTGGTGACGCAAGAAGCGTGCCGCTTCGTGACGGCGTCGGAGAAGAGTATGCGG ACGTGGTGTGTGCCGCTTGTCGTGGAGGGCATCGACGCCGCCGCTGGGCGTGCGACACCG ATGCTGCGCGGTGACAAGCCCATGGAGGTGACCCTGCCGGCCGGTATTGCGAAGGGGGCC TTTGCCAACGCCAACCCGCGTCGTACCGGCTTCTACCGCTGCCGATACGACAACGCCATC TTCGATGCATGGCTCGCCAACTACAGCCAGCTTTCTCCTGCCGATCGCCGCTCCCTCTTT TCCGACACGCTGGCCGCGATTCGGATAGGTTACGATGACATTCCGCGGCTGGCGAGGATC GCGAAGGCCGTTTCGGCGTTTGAGAAGGATATCTATGTGCTGCGAGAGTACATGCAGACC ATGGGTACCTTCCTCCGCTCTTTCGATGATACTTCTCTGACAAAGAGCCTGAACAAGGAG CTGCATGGCTTCCTCACCCCTGTCGCCGAGTCCTTTATAGGAGTCAGCCCGCAGGACGAC AACGCGTCGCTGCGCCGCAACTTTTACCTCGACGCCAGTATCTCCACTTTGCTGAACAGC TGGGAGCCGGCGGAGGTCTCTGCGCACCCGGTGATCCAGTGGGCGCTGCAGCAGGCACAG GGCTTCCTCTCCGGGGAAGGTTTCAACGCTGGCACGCTCAGCTCCTGCCTGCGTGCCTGG GTTCGCATGACCGATCCCGCCGACCTTCCAGCGCGCAACGCGCAGCTGTACGCGAAACTG CAGGAGGTGGACGGCAACGAGGAGCTGTGTCGTTCGCTGGTCGTGGCCATGACGAGTGGC GCCTCAGTTGACTTTGCACTGGGCATCATGAAAAAATGCATCGAGAACGATGGCGTCCGC AGCCAATACGGCGGACAAGTCTTCTGGAGCCTCGCGTCGAATCCAGCGATCTCCGGCGCG GAGGTGTGGCAGGCTTTTCAGAACAACTTCGACGCCGTGAAGGCGCAGTGGGGTGGCGGC CAGTTCCGCATCCAGGCTATTGTGAGTTTCCTGGGTGAGGCGCTCTCTGGCGATGCTGCG GCGGACGAGTTCGAGACCTTCTTCGAGACGCATCCACTTCCTAATGCCCGCCTCGCCATC GGCCGCGCCGCTGAGGAGCTGCGCATTCGCTCGTGGCTGAACAAAAAGTGGAAGGCTTCC CTGCCTCACGTATTCTGCTGTCACTAG
  • Download Fasta

  • Fasta :-

    MSMTKSVKLENPYVPSGYHLRVAVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIE VTSVKGATLERRDDTAHTLVLKLDAETMALADPTLHFEFTHVIQKELRGFYQVNFKHNGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNGPLKSKTVEGDT VVHAFQTVPRCPPYLTACVVGELEHISTVVKGIPVSVYATLGKVGRAQFALSITVFALEF FEKFFQCKYPLPKLDVVAVPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLGDRWESAVAHYIRKHQFGDTK TAQLWEALEESSQLPITEALTSFTTQMGYPIIHVARKDENTIVVTQEACRFVTASEKSMR TWCVPLVVEGIDAAAGRATPMLRGDKPMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAI FDAWLANYSQLSPADRRSLFSDTLAAIRIGYDDIPRLARIAKAVSAFEKDIYVLREYMQT MGTFLRSFDDTSLTKSLNKELHGFLTPVAESFIGVSPQDDNASLRRNFYLDASISTLLNS WEPAEVSAHPVIQWALQQAQGFLSGEGFNAGTLSSCLRAWVRMTDPADLPARNAQLYAKL QEVDGNEELCRSLVVAMTSGASVDFALGIMKKCIENDGVRSQYGGQVFWSLASNPAISGA EVWQAFQNNFDAVKAQWGGGQFRIQAIVSFLGEALSGDAAADEFETFFETHPLPNARLAI GRAAEELRIRSWLNKKWKASLPHVFCCH

  • title: Zn binding site
  • coordinates: H300,H304,E323
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.29.224063 SIEVTSVKGA0.991unspLmjF.29.2240552 SYSQLSPADR0.994unsp

LmjF.29.2240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India