LmjF.29.2360 | aspartyl aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.29.2360OTHER0.9984440.0001220.001434
No Results

  • Fasta :-

    >LmjF.29.2360 MATIMSEHVVKMAKEFVNFMNQAITPFHAVQTVAKMLKDAGYTQLHEEKVWPELTPGGKY YLMRNGTSIIAFSVGGKFDPMNGVKIVGAHTDSPNFLLKPRTKSTAADYERVAVQCYGGG LWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNLAIHLTSAKDRESFSPNKESH LIPIISTQIAARIAECDDKDASNPNHCVSLIKAIASVAECNPDEIVDFDLSVIDTQPAVI GGIHDEFIFSPRLDNLISCYCAVKAIIEADALENDTMMRMVCLFDHEECGSSSSQGAAGS LVPDVIEHIVSNKTLRATLVANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNA NARYATNGLTAAVVKDVAKKAAIPIQEFVVRNDSPCGSTIGPILSSLSGIKTADIGNPMI SMHSIREMCGTVDVYYMTKLIESFFINYQNPHE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/488 Sequence name : 488 Sequence length : 453 VALUES OF COMPUTED PARAMETERS Coef20 : 4.162 CoefTot : 0.253 ChDiff : -8 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.441 0.286 0.441 MesoH : -0.386 0.605 -0.279 0.261 MuHd_075 : 3.164 2.703 0.806 0.679 MuHd_095 : 45.581 28.515 12.116 8.489 MuHd_100 : 43.178 25.201 12.359 7.543 MuHd_105 : 35.754 19.472 11.509 5.812 Hmax_075 : 4.100 8.633 -1.580 2.990 Hmax_095 : 19.512 17.938 2.494 5.740 Hmax_100 : 19.700 18.200 3.005 5.560 Hmax_105 : 17.850 15.700 2.655 4.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7392 0.2608 DFMC : 0.7539 0.2461
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 453 LmjF.29.2360 MATIMSEHVVKMAKEFVNFMNQAITPFHAVQTVAKMLKDAGYTQLHEEKVWPELTPGGKYYLMRNGTSIIAFSVGGKFDP 80 MNGVKIVGAHTDSPNFLLKPRTKSTAADYERVAVQCYGGGLWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNL 160 AIHLTSAKDRESFSPNKESHLIPIISTQIAARIAECDDKDASNPNHCVSLIKAIASVAECNPDEIVDFDLSVIDTQPAVI 240 GGIHDEFIFSPRLDNLISCYCAVKAIIEADALENDTMMRMVCLFDHEECGSSSSQGAAGSLVPDVIEHIVSNKTLRATLV 320 ANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNANARYATNGLTAAVVKDVAKKAAIPIQEFVVRNDSPCGSTI 400 GPILSSLSGIKTADIGNPMISMHSIREMCGTVDVYYMTKLIESFFINYQNPHE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.29.2360 11 MSEHVVK|MA 0.081 . LmjF.29.2360 14 HVVKMAK|EF 0.062 . LmjF.29.2360 35 AVQTVAK|ML 0.086 . LmjF.29.2360 38 TVAKMLK|DA 0.106 . LmjF.29.2360 49 TQLHEEK|VW 0.060 . LmjF.29.2360 59 ELTPGGK|YY 0.058 . LmjF.29.2360 64 GKYYLMR|NG 0.109 . LmjF.29.2360 77 AFSVGGK|FD 0.065 . LmjF.29.2360 85 DPMNGVK|IV 0.096 . LmjF.29.2360 99 SPNFLLK|PR 0.073 . LmjF.29.2360 101 NFLLKPR|TK 0.101 . LmjF.29.2360 103 LLKPRTK|ST 0.083 . LmjF.29.2360 111 TAADYER|VA 0.102 . LmjF.29.2360 128 WHSWFDR|DL 0.196 . LmjF.29.2360 135 DLTVAGR|VM 0.071 . LmjF.29.2360 140 GRVMISR|ER 0.080 . LmjF.29.2360 142 VMISRER|LE 0.070 . LmjF.29.2360 146 RERLEQK|II 0.072 . LmjF.29.2360 149 LEQKIIK|ID 0.067 . LmjF.29.2360 152 KIIKIDK|PI 0.070 . LmjF.29.2360 156 IDKPIMR|IP 0.091 . LmjF.29.2360 168 IHLTSAK|DR 0.066 . LmjF.29.2360 170 LTSAKDR|ES 0.114 . LmjF.29.2360 177 ESFSPNK|ES 0.058 . LmjF.29.2360 192 STQIAAR|IA 0.112 . LmjF.29.2360 199 IAECDDK|DA 0.082 . LmjF.29.2360 212 HCVSLIK|AI 0.065 . LmjF.29.2360 252 EFIFSPR|LD 0.071 . LmjF.29.2360 264 SCYCAVK|AI 0.065 . LmjF.29.2360 279 ENDTMMR|MV 0.106 . LmjF.29.2360 313 EHIVSNK|TL 0.069 . LmjF.29.2360 316 VSNKTLR|AT 0.099 . LmjF.29.2360 341 HPNYADK|HE 0.075 . LmjF.29.2360 347 KHENAHR|PA 0.124 . LmjF.29.2360 357 HGGPVIK|YN 0.075 . LmjF.29.2360 363 KYNANAR|YA 0.182 . LmjF.29.2360 375 LTAAVVK|DV 0.100 . LmjF.29.2360 379 VVKDVAK|KA 0.069 . LmjF.29.2360 380 VKDVAKK|AA 0.142 . LmjF.29.2360 391 IQEFVVR|ND 0.124 . LmjF.29.2360 411 SSLSGIK|TA 0.076 . LmjF.29.2360 426 ISMHSIR|EM 0.114 . LmjF.29.2360 439 DVYYMTK|LI 0.062 . ____________________________^_________________

  • Fasta :-

    >LmjF.29.2360 ATGGCGACCATTATGTCTGAGCACGTTGTGAAGATGGCGAAGGAATTTGTCAACTTTATG AATCAAGCCATCACCCCATTTCACGCTGTGCAAACAGTTGCCAAAATGCTGAAGGACGCC GGGTACACGCAGCTTCATGAAGAAAAGGTTTGGCCAGAACTAACTCCCGGCGGCAAGTAC TACTTGATGCGCAATGGCACCAGCATCATTGCGTTTTCAGTCGGAGGAAAATTTGACCCG ATGAACGGTGTAAAAATTGTTGGCGCTCACACGGATTCCCCTAATTTTTTGCTGAAGCCG CGCACAAAATCAACCGCCGCTGATTACGAGCGCGTTGCAGTCCAGTGCTACGGTGGCGGT CTGTGGCACTCGTGGTTTGATCGCGATTTGACAGTTGCCGGCCGCGTTATGATTTCGCGA GAACGCTTGGAGCAGAAAATCATTAAGATCGACAAACCAATCATGCGTATCCCAAATCTC GCTATTCATTTGACCTCTGCTAAGGATCGTGAATCGTTTTCGCCCAACAAGGAGTCTCAT CTGATCCCTATCATATCGACGCAGATAGCCGCGAGGATTGCGGAGTGTGACGACAAGGAT GCATCCAATCCGAATCACTGCGTTTCCTTGATAAAGGCGATCGCGAGCGTTGCTGAATGC AACCCGGATGAAATTGTTGATTTCGATTTGAGCGTGATTGACACTCAACCAGCAGTGATT GGAGGAATTCATGATGAGTTCATCTTCTCGCCGCGCCTCGACAATCTCATCTCGTGCTAT TGTGCTGTGAAGGCAATTATCGAGGCTGACGCATTGGAAAATGATACGATGATGCGCATG GTGTGCTTGTTCGATCACGAAGAGTGTGGTTCCAGCTCATCCCAGGGTGCTGCTGGCTCA CTGGTTCCTGATGTTATTGAACACATTGTAAGCAACAAAACCCTTCGTGCAACATTGGTC GCCAATTCATTTCTTCTCTCCGTCGATGGCGCACATGGATGTCATCCGAATTACGCCGAC AAGCACGAAAATGCTCACCGACCAGCTCTTCACGGAGGACCTGTTATCAAATACAATGCA AACGCCCGTTATGCAACCAACGGATTGACAGCAGCCGTAGTGAAGGATGTGGCAAAGAAG GCTGCCATACCCATCCAAGAGTTTGTGGTGCGAAATGACTCTCCCTGCGGATCCACCATC GGGCCCATTCTGTCTTCTCTGTCCGGTATAAAAACTGCTGATATTGGCAACCCCATGATT AGCATGCACAGTATCCGGGAGATGTGCGGTACTGTCGATGTCTACTACATGACAAAGCTG ATTGAATCCTTTTTCATCAATTACCAAAATCCGCATGAGTAG
  • Download Fasta

  • Fasta :-

    MATIMSEHVVKMAKEFVNFMNQAITPFHAVQTVAKMLKDAGYTQLHEEKVWPELTPGGKY YLMRNGTSIIAFSVGGKFDPMNGVKIVGAHTDSPNFLLKPRTKSTAADYERVAVQCYGGG LWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNLAIHLTSAKDRESFSPNKESH LIPIISTQIAARIAECDDKDASNPNHCVSLIKAIASVAECNPDEIVDFDLSVIDTQPAVI GGIHDEFIFSPRLDNLISCYCAVKAIIEADALENDTMMRMVCLFDHEECGSSSSQGAAGS LVPDVIEHIVSNKTLRATLVANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNA NARYATNGLTAAVVKDVAKKAAIPIQEFVVRNDSPCGSTIGPILSSLSGIKTADIGNPMI SMHSIREMCGTVDVYYMTKLIESFFINYQNPHE

  • title: metal binding site
  • coordinates: H90,D254,E287,E288,D329,H423
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.29.2360394 SVRNDSPCGS0.993unspLmjF.29.2360394 SVRNDSPCGS0.993unspLmjF.29.2360394 SVRNDSPCGS0.993unspLmjF.29.2360424 SISMHSIREM0.994unspLmjF.29.2360166 SIHLTSAKDR0.995unspLmjF.29.2360172 SKDRESFSPN0.995unsp

LmjF.29.2360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India