LmjF.30.0050 | MATH domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.30.0050OTHER0.9998290.0000720.000099
No Results

  • Fasta :-

    >LmjF.30.0050 MHCLSSLSQGDLSFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLSPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQMAELK SRLQSLKKENAELAQLKQDATQAAKEAKKNSERIAQELKFVLDRVQSNQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/677 Sequence name : 677 Sequence length : 762 VALUES OF COMPUTED PARAMETERS Coef20 : 3.876 CoefTot : -0.491 ChDiff : -16 ZoneTo : 24 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 1.159 0.063 0.429 MesoH : -0.518 0.205 -0.443 0.179 MuHd_075 : 21.820 14.796 5.712 3.379 MuHd_095 : 12.543 19.704 5.306 5.582 MuHd_100 : 9.421 14.697 5.733 4.002 MuHd_105 : 12.671 15.221 5.951 4.254 Hmax_075 : 12.687 11.200 2.612 4.188 Hmax_095 : 8.000 12.338 0.573 4.559 Hmax_100 : 11.900 10.300 2.695 3.220 Hmax_105 : 15.050 13.650 4.107 4.655 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9378 0.0622 DFMC : 0.9405 0.0595
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 762 LmjF.30.0050 MHCLSSLSQGDLSFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAALADLYKTVTDTLISAAHRSAP 80 HELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSNSDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDE 160 KGKQYHTLGPFPPPRLTVRAPTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI 240 DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGPLPTAASIDFLNTLPDHLKQS 320 LGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKKIANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAK 400 QKKVKFTVPPDSMSIKGDMGFVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV 480 VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLSPDQGFVTADDDSITIEVGIVLVEPLKTPTAREKAPVAKEK 560 KNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEKTRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQ 640 ERQRELDKIKQAQEQMAELKSRLQSLKKENAELAQLKQDATQAAKEAKKNSERIAQELKFVLDRVQSNQQKLHTQEKKLA 720 AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM 800 ................................................................................ 80 ................................................................P............... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.30.0050 31 DAPIEAK|PG 0.064 . LmjF.30.0050 34 IEAKPGR|EM 0.106 . LmjF.30.0050 38 PGREMMR|TL 0.110 . LmjF.30.0050 41 EMMRTLR|KE 0.112 . LmjF.30.0050 42 MMRTLRK|EL 0.090 . LmjF.30.0050 46 LRKELVR|SM 0.202 . LmjF.30.0050 65 ALADLYK|TV 0.080 . LmjF.30.0050 77 LISAAHR|SA 0.179 . LmjF.30.0050 86 PHELINR|TT 0.084 . LmjF.30.0050 92 RTTSDCR|IV 0.100 . LmjF.30.0050 124 DSNSDIK|ST 0.086 . LmjF.30.0050 128 DIKSTAK|DA 0.104 . LmjF.30.0050 133 AKDAEQK|QR 0.061 . LmjF.30.0050 135 DAEQKQR|KR 0.086 . LmjF.30.0050 136 AEQKQRK|RE 0.090 . LmjF.30.0050 137 EQKQRKR|EE 0.123 . LmjF.30.0050 141 RKREETK|RK 0.075 . LmjF.30.0050 142 KREETKR|KR 0.227 . LmjF.30.0050 143 REETKRK|RR 0.101 . LmjF.30.0050 144 EETKRKR|RE 0.120 . LmjF.30.0050 145 ETKRKRR|EE 0.533 *ProP* LmjF.30.0050 153 EEDMLMK|ER 0.052 . LmjF.30.0050 155 DMLMKER|KV 0.113 . LmjF.30.0050 156 MLMKERK|VT 0.143 . LmjF.30.0050 161 RKVTDEK|GK 0.064 . LmjF.30.0050 163 VTDEKGK|QY 0.072 . LmjF.30.0050 175 GPFPPPR|LT 0.099 . LmjF.30.0050 179 PPRLTVR|AP 0.095 . LmjF.30.0050 188 TNTFPSR|KA 0.128 . LmjF.30.0050 189 NTFPSRK|AL 0.087 . LmjF.30.0050 194 RKALQQR|TI 0.128 . LmjF.30.0050 220 NQLISSR|ST 0.187 . LmjF.30.0050 244 LSIDSLK|KV 0.090 . LmjF.30.0050 245 SIDSLKK|VG 0.080 . LmjF.30.0050 251 KVGESAK|AK 0.060 . LmjF.30.0050 253 GESAKAK|LR 0.075 . LmjF.30.0050 255 SAKAKLR|PS 0.104 . LmjF.30.0050 269 FVSQIVK|TA 0.059 . LmjF.30.0050 273 IVKTAVR|LG 0.069 . LmjF.30.0050 278 VRLGCEK|AC 0.060 . LmjF.30.0050 285 ACVLMEK|QK 0.071 . LmjF.30.0050 287 VLMEKQK|II 0.085 . LmjF.30.0050 318 TLPDHLK|QS 0.063 . LmjF.30.0050 331 LGLPEEK|PP 0.053 . LmjF.30.0050 340 VEDMWER|MV 0.134 . LmjF.30.0050 354 SVLTNLR|LK 0.059 . LmjF.30.0050 356 LTNLRLK|PL 0.064 . LmjF.30.0050 359 LRLKPLK|KI 0.070 . LmjF.30.0050 360 RLKPLKK|IA 0.093 . LmjF.30.0050 377 DTNSTEK|FC 0.069 . LmjF.30.0050 389 VFAAFPR|ER 0.083 . LmjF.30.0050 391 AAFPRER|IR 0.071 . LmjF.30.0050 393 FPRERIR|AK 0.091 . LmjF.30.0050 395 RERIRAK|FS 0.096 . LmjF.30.0050 398 IRAKFSR|AK 0.171 . LmjF.30.0050 400 AKFSRAK|QK 0.069 . LmjF.30.0050 402 FSRAKQK|KV 0.085 . LmjF.30.0050 403 SRAKQKK|VK 0.200 . LmjF.30.0050 405 AKQKKVK|FT 0.083 . LmjF.30.0050 416 PDSMSIK|GD 0.079 . LmjF.30.0050 434 NISMLTK|ES 0.071 . LmjF.30.0050 438 LTKESER|HY 0.105 . LmjF.30.0050 450 FHFANLK|WS 0.055 . LmjF.30.0050 459 LLCMTNK|ES 0.059 . LmjF.30.0050 475 TGSVHCK|FL 0.110 . LmjF.30.0050 483 LITVVNK|AN 0.059 . LmjF.30.0050 514 GFNNVIK|FA 0.086 . LmjF.30.0050 546 VLVEPLK|TP 0.058 . LmjF.30.0050 551 LKTPTAR|EK 0.103 . LmjF.30.0050 553 TPTAREK|AP 0.068 . LmjF.30.0050 558 EKAPVAK|EK 0.075 . LmjF.30.0050 560 APVAKEK|KN 0.082 . LmjF.30.0050 561 PVAKEKK|NE 0.083 . LmjF.30.0050 565 EKKNEPR|VD 0.126 . LmjF.30.0050 579 QLLADEK|VE 0.052 . LmjF.30.0050 584 EKVEQTR|KK 0.099 . LmjF.30.0050 585 KVEQTRK|KL 0.078 . LmjF.30.0050 586 VEQTRKK|LK 0.105 . LmjF.30.0050 588 QTRKKLK|QE 0.065 . LmjF.30.0050 593 LKQEISK|TI 0.078 . LmjF.30.0050 596 EISKTIR|EE 0.107 . LmjF.30.0050 600 TIREEEK|TR 0.064 . LmjF.30.0050 602 REEEKTR|KD 0.095 . LmjF.30.0050 603 EEEKTRK|DI 0.099 . LmjF.30.0050 608 RKDITQR|AS 0.092 . LmjF.30.0050 611 ITQRASK|AY 0.130 . LmjF.30.0050 619 YHDLCDR|LR 0.062 . LmjF.30.0050 621 DLCDRLR|QE 0.073 . LmjF.30.0050 625 RLRQETK|RT 0.069 . LmjF.30.0050 626 LRQETKR|TQ 0.201 . LmjF.30.0050 629 ETKRTQK|EV 0.171 . LmjF.30.0050 634 QKEVADR|ER 0.082 . LmjF.30.0050 636 EVADRER|KE 0.097 . LmjF.30.0050 637 VADRERK|EE 0.131 . LmjF.30.0050 642 RKEEQER|QR 0.072 . LmjF.30.0050 644 EEQERQR|EL 0.113 . LmjF.30.0050 648 RQRELDK|IK 0.075 . LmjF.30.0050 650 RELDKIK|QA 0.076 . LmjF.30.0050 660 EQMAELK|SR 0.078 . LmjF.30.0050 662 MAELKSR|LQ 0.099 . LmjF.30.0050 667 SRLQSLK|KE 0.073 . LmjF.30.0050 668 RLQSLKK|EN 0.080 . LmjF.30.0050 677 AELAQLK|QD 0.061 . LmjF.30.0050 685 DATQAAK|EA 0.061 . LmjF.30.0050 688 QAAKEAK|KN 0.086 . LmjF.30.0050 689 AAKEAKK|NS 0.103 . LmjF.30.0050 693 AKKNSER|IA 0.097 . LmjF.30.0050 699 RIAQELK|FV 0.074 . LmjF.30.0050 704 LKFVLDR|VQ 0.094 . LmjF.30.0050 711 VQSNQQK|LH 0.069 . LmjF.30.0050 717 KLHTQEK|KL 0.069 . LmjF.30.0050 718 LHTQEKK|LA 0.107 . LmjF.30.0050 723 KKLAAAK|SR 0.078 . LmjF.30.0050 725 LAAAKSR|YE 0.116 . LmjF.30.0050 753 MSEDLTR|FI 0.113 . ____________________________^_________________

  • Fasta :-

    >LmjF.30.0050 ATGCACTGTCTTTCCTCGTTGTCCCAAGGGGATCTGTCCTTCTACCAGTCCACGTTGTAC CAGCTGATTCAGGATGCCCCGATCGAGGCGAAGCCCGGCCGTGAAATGATGCGCACACTC CGCAAGGAGCTGGTACGATCGATGGAGCAGGAAGAATGCCCTGAATACTGCGCAGCCTTG GCAGACCTGTACAAAACCGTGACGGACACATTGATATCCGCTGCTCACCGCAGTGCCCCG CACGAGCTCATCAACCGCACCACGAGCGACTGCCGCATCGTCACGGACGAGGACGAGTAT CAGTTCCACCAGGAGGAGGGCTTTTTCGACGACGAGGACGAGGATGAAATGGACTCCAAC AGCGACATCAAGTCCACTGCCAAGGACGCAGAGCAGAAGCAGCGCAAGCGGGAGGAAACG AAGCGCAAGCGCCGCGAGGAGGAGGACATGCTCATGAAGGAGCGCAAGGTCACGGACGAG AAGGGGAAGCAGTACCACACCCTCGGCCCCTTTCCGCCGCCGCGGCTCACCGTGCGTGCC CCCACCAATACCTTTCCCAGCCGCAAGGCACTGCAGCAGCGCACCATCATCGAGACCCCG TCTTCCACGTCTTCGTCGTCGGACGATGATGAAGCGATCAACCAGCTCATTAGCAGTCGC TCCACCGAAGGCGGGGAGGCCGTCAACCACCTGACCGACTTTCTTCAGCCCCTGTCTATT GACTCGCTCAAGAAAGTGGGCGAGAGCGCCAAGGCAAAGCTGCGGCCCTCCTCAACACAC GACGAATTCGTGTCCCAAATCGTAAAGACGGCGGTGCGGCTGGGCTGCGAGAAGGCGTGC GTCCTTATGGAGAAGCAGAAGATCATTGAAGACATGACGTCACACGTGCAAACGGGCCCG CTGCCTACGGCAGCCAGCATCGACTTCTTGAACACGCTGCCAGACCACCTGAAGCAGTCG CTGGGTAGTGTGCTGGGCCTTCCGGAGGAGAAGCCCCCGGTGGAGGACATGTGGGAGCGC ATGGTGGCTATGGGCTTCCTCTCCGTGCTAACGAATCTGCGCTTGAAACCGCTCAAGAAA ATTGCGAACGAGCTCAGCATCGTGCTGCCGGACACCAACTCAACGGAGAAGTTCTGCGAG TTTATTGTCTTTGCTGCCTTTCCACGCGAGCGCATTCGCGCGAAATTCTCCCGCGCCAAG CAGAAGAAAGTGAAGTTTACGGTGCCGCCGGACAGCATGAGCATCAAGGGCGACATGGGG TTTGTGACGTTCCACGTCAACAACATATCGATGCTGACGAAGGAATCGGAGCGTCATTAC TCGCCGGAGTTCCACTTTGCCAATCTCAAGTGGAGCCTGCTGTGCATGACGAACAAGGAG TCGCTGGCGCTGTACCTCTGCCAGACCGGCAGCGTGCACTGCAAGTTCCTCATCACGGTG GTGAACAAGGCAAACCCTGATGACTCCATCTGTAATGAGGGCACGCAGAGCTTTTCTGCC ATGTCGCAGGAAAACGACTGGGGTTTCAACAACGTCATCAAGTTTGCAGAGCTGCTCAGT CCTGACCAGGGCTTCGTCACTGCCGATGACGACAGCATCACCATCGAGGTCGGCATCGTG TTGGTGGAGCCTCTCAAGACACCCACTGCACGCGAGAAGGCGCCAGTCGCCAAGGAGAAG AAGAACGAACCCCGTGTGGACGAGGCGGCGATGCTGCAGCTGCTCGCTGACGAGAAGGTA GAGCAGACGCGCAAGAAGCTCAAGCAGGAGATCAGCAAGACCATCCGGGAGGAGGAGAAG ACCCGCAAGGACATTACACAGAGGGCCAGCAAGGCGTACCACGACTTGTGCGATCGCCTT CGCCAGGAGACGAAGCGCACCCAAAAGGAGGTGGCGGACCGCGAGCGCAAGGAGGAGCAG GAGCGGCAGCGGGAGCTTGACAAAATTAAACAGGCGCAGGAGCAGATGGCGGAGCTCAAG AGTCGATTACAGTCGCTCAAGAAGGAGAATGCGGAGCTGGCACAGTTGAAGCAGGATGCC ACACAGGCGGCCAAGGAGGCGAAAAAGAACAGCGAGCGCATTGCCCAGGAACTGAAGTTT GTCTTGGACAGGGTTCAATCGAACCAGCAGAAGCTCCACACACAGGAGAAGAAGCTTGCA GCGGCCAAGAGCCGCTACGAGAGCATTCTGGCCGAGGAGCCCGACACCCCCAGTCCGTCC GATGATGAGAACGACCTCATGAGCGAGGACCTCACGCGCTTCATCAACCTAATGACGGAT GATATGTAA
  • Download Fasta

  • Fasta :-

    MHCLSSLSQGDLSFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLSPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQMAELK SRLQSLKKENAELAQLKQDATQAAKEAKKNSERIAQELKFVLDRVQSNQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM

  • title: putative substrate binding site
  • coordinates: Y465,D506,W507,G508
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.30.0050140 TKREETKRKR0.992unspLmjF.30.0050140 TKREETKRKR0.992unspLmjF.30.0050140 TKREETKRKR0.992unspLmjF.30.0050204 SPSSTSSSSD0.993unspLmjF.30.0050205 SSSTSSSSDD0.997unspLmjF.30.0050206 SSTSSSSDDD0.997unspLmjF.30.0050207 STSSSSDDDE0.997unspLmjF.30.0050221 SISSRSTEGG0.993unspLmjF.30.0050257 SKLRPSSTHD0.99unspLmjF.30.0050258 SLRPSSTHDE0.998unspLmjF.30.0050441 SERHYSPEFH0.997unspLmjF.30.0050738 SPDTPSPSDD0.997unspLmjF.30.0050740 STPSPSDDEN0.994unspLmjF.30.005089 SNRTTSDCRI0.995unspLmjF.30.0050119 SDEMDSNSDI0.991unsp

LmjF.30.0050      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India