LmjF.31.0390 | Calpain-like protein 2

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.0390OTHER0.9999220.0000680.000010
No Results

  • Fasta :-

    >LmjF.31.0390 MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDSECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPS VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMGT SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIAEDLMDMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLTEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRLWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGA WSKNDKRWSKYPSVRNACYRHGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRV RGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN GIKVEFKRVDRNCRIFANMPSFAQTGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/719 Sequence name : 719 Sequence length : 784 VALUES OF COMPUTED PARAMETERS Coef20 : 2.681 CoefTot : 0.170 ChDiff : -36 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.200 1.100 0.049 0.612 MesoH : -0.550 0.251 -0.400 0.238 MuHd_075 : 13.104 3.339 3.006 0.150 MuHd_095 : 6.132 6.194 1.787 1.737 MuHd_100 : 3.188 7.981 1.793 2.045 MuHd_105 : 6.114 7.646 1.811 2.226 Hmax_075 : 11.083 4.200 -0.181 3.180 Hmax_095 : 7.175 3.938 -0.050 3.640 Hmax_100 : 5.600 4.000 -0.778 3.060 Hmax_105 : 8.167 4.300 0.331 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9876 0.0124 DFMC : 0.9692 0.0308
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 784 LmjF.31.0390 MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQSDGDTAKKYVPPRRDLPPPY 80 VNDSECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPSVEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFT 160 FGAKSDLQPGEKVDMYVMGTSELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIAEDLMDMAQA 240 IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPEEQLTEVRLFRRDILPSQVTH 320 GSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIERALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDI 400 RRLWVALLEKTYAKVHGSYANIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE 480 AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGAWSKNDKRWSKYPSVRNACYR 560 HGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRVRGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEY 640 HALLLSVFRHSGKKEKLDATSNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN 720 GIKVEFKRVDRNCRIFANMPSFAQTGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFGILEE 800 ................................................................................ 80 ............................P................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.0390 24 VMPLPTR|PS 0.080 . LmjF.31.0390 27 LPTRPSK|MD 0.169 . LmjF.31.0390 37 DTLHPVR|VP 0.066 . LmjF.31.0390 48 LPDLLPR|SM 0.172 . LmjF.31.0390 51 LLPRSMK|DI 0.234 . LmjF.31.0390 55 SMKDIQK|MR 0.059 . LmjF.31.0390 57 KDIQKMR|NL 0.104 . LmjF.31.0390 67 SDGDTAK|KY 0.067 . LmjF.31.0390 68 DGDTAKK|YV 0.108 . LmjF.31.0390 73 KKYVPPR|RD 0.078 . LmjF.31.0390 74 KYVPPRR|DL 0.146 . LmjF.31.0390 92 CDEFEDK|TI 0.068 . LmjF.31.0390 104 ILNMSEK|DR 0.080 . LmjF.31.0390 106 NMSEKDR|TK 0.113 . LmjF.31.0390 108 SEKDRTK|RM 0.062 . LmjF.31.0390 109 EKDRTKR|MG 0.604 *ProP* LmjF.31.0390 136 ENGLLFK|VV 0.077 . LmjF.31.0390 152 YYNDTDK|YE 0.072 . LmjF.31.0390 158 KYEMHVK|FT 0.077 . LmjF.31.0390 164 KFTFGAK|SD 0.069 . LmjF.31.0390 172 DLQPGEK|VD 0.059 . LmjF.31.0390 196 FPGETTK|LV 0.080 . LmjF.31.0390 201 TKLVAGK|IN 0.074 . LmjF.31.0390 206 GKINGFK|CS 0.065 . LmjF.31.0390 210 GFKCSAK|AV 0.075 . LmjF.31.0390 218 VPLNDDK|RD 0.055 . LmjF.31.0390 219 PLNDDKR|DI 0.295 . LmjF.31.0390 229 YGEVNDR|IA 0.119 . LmjF.31.0390 244 AQAIGVR|ED 0.078 . LmjF.31.0390 252 DDLTEEK|VL 0.056 . LmjF.31.0390 262 YCEENEK|PY 0.056 . LmjF.31.0390 270 YIDCDFR|PC 0.078 . LmjF.31.0390 278 CDYSLYR|AD 0.070 . LmjF.31.0390 287 VDTYLPR|FI 0.105 . LmjF.31.0390 293 RFIPWHR|PS 0.089 . LmjF.31.0390 307 EQLTEVR|LF 0.065 . LmjF.31.0390 310 TEVRLFR|RD 0.128 . LmjF.31.0390 311 EVRLFRR|DI 0.246 . LmjF.31.0390 342 TDASGDR|LH 0.082 . LmjF.31.0390 348 RLHDLFR|HP 0.088 . LmjF.31.0390 357 VSAANGK|IE 0.066 . LmjF.31.0390 360 ANGKIER|AL 0.134 . LmjF.31.0390 388 DFLPATR|DG 0.065 . LmjF.31.0390 395 DGPEFAR|CA 0.112 . LmjF.31.0390 401 RCAVDIR|RL 0.088 . LmjF.31.0390 402 CAVDIRR|LW 0.108 . LmjF.31.0390 410 WVALLEK|TY 0.060 . LmjF.31.0390 414 LEKTYAK|VH 0.064 . LmjF.31.0390 441 TGFPVTR|YE 0.141 . LmjF.31.0390 465 EMLSYNR|MG 0.066 . LmjF.31.0390 500 LEATYEK|MG 0.054 . LmjF.31.0390 523 FEDLDLR|LL 0.072 . LmjF.31.0390 526 LDLRLLR|VR 0.170 . LmjF.31.0390 528 LRLLRVR|NP 0.080 . LmjF.31.0390 543 WTGAWSK|ND 0.055 . LmjF.31.0390 546 AWSKNDK|RW 0.077 . LmjF.31.0390 547 WSKNDKR|WS 0.109 . LmjF.31.0390 550 NDKRWSK|YP 0.128 . LmjF.31.0390 555 SKYPSVR|NA 0.113 . LmjF.31.0390 560 VRNACYR|HG 0.118 . LmjF.31.0390 570 SPTDADR|TF 0.080 . LmjF.31.0390 581 EWSDALK|IF 0.081 . LmjF.31.0390 592 GGCCHLR|TP 0.072 . LmjF.31.0390 599 TPWFDYR|VR 0.092 . LmjF.31.0390 601 WFDYRVR|GE 0.086 . LmjF.31.0390 633 LSQEDER|DD 0.092 . LmjF.31.0390 649 LLLSVFR|HS 0.118 . LmjF.31.0390 653 VFRHSGK|KE 0.057 . LmjF.31.0390 654 FRHSGKK|EK 0.098 . LmjF.31.0390 656 HSGKKEK|LD 0.067 . LmjF.31.0390 667 SNSLVEK|PD 0.078 . LmjF.31.0390 670 LVEKPDR|QL 0.078 . LmjF.31.0390 673 KPDRQLK|FN 0.126 . LmjF.31.0390 678 LKFNFSR|DV 0.169 . LmjF.31.0390 683 SRDVAMK|YT 0.092 . LmjF.31.0390 698 PYFVIPR|IH 0.092 . LmjF.31.0390 706 HDPSVTK|PY 0.062 . LmjF.31.0390 723 YVGNGIK|VE 0.053 . LmjF.31.0390 727 GIKVEFK|RV 0.079 . LmjF.31.0390 728 IKVEFKR|VD 0.148 . LmjF.31.0390 731 EFKRVDR|NC 0.169 . LmjF.31.0390 734 RVDRNCR|IF 0.162 . LmjF.31.0390 758 AAEYQIR|TP 0.084 . LmjF.31.0390 761 YQIRTPR|QP 0.214 . LmjF.31.0390 775 EEIVDER|LR 0.082 . LmjF.31.0390 777 IVDERLR|EF 0.091 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.0390 ATGCCTGCTGCAACGGCCGAGCCGCAGCCGTTTGAGTTCCCACCGGGCTACGTGATGCCG CTGCCCACACGTCCGAGCAAGATGGACGAGGACACGCTGCACCCCGTGCGCGTGCCGACA CCGCTGCCGGACTTGCTGCCGCGTAGCATGAAGGACATCCAGAAGATGCGTAACCTGCAG TCCGACGGAGACACAGCCAAGAAGTACGTGCCACCGCGCCGCGACCTGCCGCCGCCGTAC GTGAACGACAGCGAGTGCGACGAATTCGAGGACAAGACGATTGACACGACCATCTTGAAC ATGTCGGAGAAAGACCGCACGAAGCGCATGGGCCATACCTACCAGTTAAACGGCCCCTCC GTTGAGGGCGACGTCACACCGGTCTTCGAGAACGGCCTGCTCTTCAAGGTTGTGACGCCA GATGGCTCTTGGTACTACTACAACGACACAGACAAGTACGAGATGCACGTGAAGTTCACC TTCGGCGCCAAGTCAGACCTGCAGCCTGGCGAAAAGGTCGACATGTACGTTATGGGCACA AGCGAACTGTCTGCCTCCCTCGTCGTCTTCCCTGGCGAGACGACGAAGCTGGTAGCCGGC AAGATCAACGGCTTCAAGTGCAGCGCCAAGGCGGTGCCACTGAACGACGACAAGCGCGAC ATCCTCTACGGCGAAGTCAACGACCGCATCGCTGAAGACCTGATGGACATGGCGCAGGCC ATCGGCGTGCGTGAGGACGACCTGACAGAGGAGAAGGTGCTGGCGTACTGCGAGGAGAAC GAGAAGCCGTACATCGACTGCGACTTCCGTCCGTGCGACTACTCGCTCTACCGTGCTGAC GTGGACACGTACCTGCCGCGCTTCATCCCGTGGCACCGCCCCTCCACCTGGATCCCGGAG GAGCAGCTCACGGAGGTGCGCCTCTTCCGCCGCGACATCCTGCCGTCGCAGGTGACACAC GGCTCCATCGGCGACACCTACCTCGTCTCCGCCATCGCTGCCCTGACCGACGCCAGCGGC GACCGACTGCACGACCTCTTCCGCCACCCGGTGAGTGCCGCCAACGGCAAGATCGAGCGT GCCCTCGGTGCCTACTGGGTCACGATAAACTTCAACGGCTGGTGGCTGCCGGTGCTGCTG GACGACTTCTTGCCTGCGACGCGTGACGGCCCCGAGTTCGCCCGGTGCGCGGTGGACATC CGGCGCTTGTGGGTGGCGCTGCTGGAGAAGACCTACGCGAAAGTGCACGGCTCCTACGCG AACATCGCGAGCGGCGATCCGCTGGAGCCGCTGTCGGAGTTCACCGGCTTCCCAGTGACG CGCTACGAGAGCTTCTGGGAGGATGCGCAGGGCGGCGACGACATGCTGTTTCAGGAGATG CTGTCTTACAACAGGATGGGACACTTGCAGGTGCTCTGCACCCCGTCCGACGGCGGCGAG GCGTTTGGCAACGCGAACGTCGTCAGCGCCAACCCGGAGCTGGAGGCGACGTACGAGAAA ATGGGCCTCCTCCTGCACCATGGCTACGCGGTTCTGCAGACGGAGTACTTCGAGGACCTC GACCTCCGTCTGCTGCGCGTCCGCAACCCGTGGGGCAACGGCTCTGAGTGGACCGGCGCG TGGAGCAAGAACGACAAGCGCTGGAGCAAGTACCCGTCCGTGCGCAACGCGTGCTACCGG CACGGCGGCAGCCCGACGGATGCCGACCGCACGTTTTGGGTAGAGTGGAGTGACGCGCTC AAGATCTTCTCCGGCGGTGGCTGCTGCCACCTGCGCACTCCGTGGTTCGACTACCGCGTC CGTGGCGAGTTCGCTCAGGGCATCCCGACCGTCTCTTTCGAGGTCAACGTCTCCGCGCCG ACGGAGGCCTACATCACTCTCTCGCAGGAGGACGAGCGCGACGACCCGTCGCTGGAGTAC CATGCACTCCTGCTGAGCGTGTTCCGGCACAGCGGCAAAAAGGAGAAGCTGGACGCGACC AGCAACTCGCTTGTGGAGAAGCCGGACCGCCAGCTCAAGTTCAACTTCTCGCGCGACGTG GCGATGAAGTACACCTTTTTACCAGAGCACAGCCCGTACTTTGTCATCCCGCGCATCCAC GACCCCAGCGTGACGAAGCCGTACGTGATGGGCCTCCTGTGCGACACGTACGTTGGCAAC GGCATCAAGGTGGAGTTCAAGCGGGTGGACCGCAACTGCCGCATCTTCGCCAACATGCCA TCCTTTGCGCAGACAGGAATGATGGAGGACACAGCGGCTGAGTACCAGATCCGCACTCCA CGGCAGCCGATTGAGTGCATCGGGGAGGAGATCGTGGACGAGCGCCTGCGCGAGTTTGGC ATCCTGGAGGAGTAG
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  • Fasta :-

    MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDSECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPS VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMGT SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIAEDLMDMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLTEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRLWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGA WSKNDKRWSKYPSVRNACYRHGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRV RGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN GIKVEFKRVDRNCRIFANMPSFAQTGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE

  • title: catalytic site
  • coordinates: T326,H507,N529
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.039084 SYVNDSECDE0.995unspLmjF.31.039084 SYVNDSECDE0.995unspLmjF.31.039084 SYVNDSECDE0.995unspLmjF.31.0390102 SILNMSEKDR0.997unspLmjF.31.0390564 SRHGGSPTDA0.997unspLmjF.31.0390628 SYITLSQEDE0.997unspLmjF.31.0390651 SVFRHSGKKE0.998unspLmjF.31.039026 SPTRPSKMDE0.996unspLmjF.31.039049 SLLPRSMKDI0.997unsp

LmjF.31.0390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India