LmjF.31.0410 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.0410OTHER0.9995690.0001660.000264
No Results

  • Fasta :-

    >LmjF.31.0410 MVFPHHTFQLDDVSVASLRAAVAGDSRKLERLEERLSRSRDQAARRAALEKRIATLHGGI AVLREVARPAASLPLLANATVPSDSSFPVFSFTSPARTVLRHTSSGISGAWPRRNSPAVS MSSAQDEFDETTIHPDSLPVPATWRQKTSVFRYCGPSVAGAVSSVIDEGVLYRIITDGGG WAFYNDTRYYTVQVRYRITAQSPVTPGHSVTVDGKGAQQELSMELGPEETKVLLTGSVVG FENLCKATLLPRRAATTQEDQALCAEPQQHWSVLATSCPDAALLDRRSVSTTHLVARCVE KQIRYVDLHFFPSHASLYRDGQDSFYIPPLHWRLPASYLPRDDGVRHEVRLFHGPILHPD GLHAGHLLPNHLLLSVAIGLTCLWPQALRCLFIHPQGAQEGKRDRAVGAYHVRLCTGGWW RLCVLDEFFPASAQCPEFSHCADDLRVLWLPLLEKACAKSLGSYAAMLGVPLEYFVRALT GGPCTVLREIWPAHEDLCDSTVKATRFLALMKRLLLQRTAEMPSVVCWLQPHFRGTARTQ HIGDRLVVLYEDIGLDPNIATVVLGLETLGDGQCVARLRQTAQKRRSAESWLDLWRRAGK SWVDEVSDLVFAMEESAGDTVWMALEDLPQYFQGGCVAPLTSDWGTVKVQGEFMQRQPSV VLEVTVTAPTRLLASVTQRDLDEAGLPTQAVKLDNTSIGASQALAGLSCLLYAKGSGDST HFYGSSGSTPDAFEVAQELHFAYEREVTAGHLLDPRQGPYYVAPFVHAASFDVAYTITVQ LIGADSVSSAAPLGAPESSTARVRFMTAKRGTALFQNLTQPILLESSMEVSSTAMNYQSH PPGQLRLHCGSGVAVDLVLSGRDVPTPITAAGTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/274 Sequence name : 274 Sequence length : 874 VALUES OF COMPUTED PARAMETERS Coef20 : 3.981 CoefTot : -0.764 ChDiff : -10 ZoneTo : 10 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.653 1.747 0.270 0.645 MesoH : -0.078 0.518 -0.214 0.259 MuHd_075 : 11.745 6.095 3.820 1.954 MuHd_095 : 11.356 8.367 3.681 1.894 MuHd_100 : 12.131 5.297 4.059 1.289 MuHd_105 : 12.963 2.341 4.092 0.619 Hmax_075 : 9.100 11.200 0.362 3.999 Hmax_095 : 11.112 12.250 0.602 4.235 Hmax_100 : 9.900 10.200 0.065 3.740 Hmax_105 : 13.417 10.100 1.692 4.013 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9906 0.0094 DFMC : 0.9829 0.0171
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 874 LmjF.31.0410 MVFPHHTFQLDDVSVASLRAAVAGDSRKLERLEERLSRSRDQAARRAALEKRIATLHGGIAVLREVARPAASLPLLANAT 80 VPSDSSFPVFSFTSPARTVLRHTSSGISGAWPRRNSPAVSMSSAQDEFDETTIHPDSLPVPATWRQKTSVFRYCGPSVAG 160 AVSSVIDEGVLYRIITDGGGWAFYNDTRYYTVQVRYRITAQSPVTPGHSVTVDGKGAQQELSMELGPEETKVLLTGSVVG 240 FENLCKATLLPRRAATTQEDQALCAEPQQHWSVLATSCPDAALLDRRSVSTTHLVARCVEKQIRYVDLHFFPSHASLYRD 320 GQDSFYIPPLHWRLPASYLPRDDGVRHEVRLFHGPILHPDGLHAGHLLPNHLLLSVAIGLTCLWPQALRCLFIHPQGAQE 400 GKRDRAVGAYHVRLCTGGWWRLCVLDEFFPASAQCPEFSHCADDLRVLWLPLLEKACAKSLGSYAAMLGVPLEYFVRALT 480 GGPCTVLREIWPAHEDLCDSTVKATRFLALMKRLLLQRTAEMPSVVCWLQPHFRGTARTQHIGDRLVVLYEDIGLDPNIA 560 TVVLGLETLGDGQCVARLRQTAQKRRSAESWLDLWRRAGKSWVDEVSDLVFAMEESAGDTVWMALEDLPQYFQGGCVAPL 640 TSDWGTVKVQGEFMQRQPSVVLEVTVTAPTRLLASVTQRDLDEAGLPTQAVKLDNTSIGASQALAGLSCLLYAKGSGDST 720 HFYGSSGSTPDAFEVAQELHFAYEREVTAGHLLDPRQGPYYVAPFVHAASFDVAYTITVQLIGADSVSSAAPLGAPESST 800 ARVRFMTAKRGTALFQNLTQPILLESSMEVSSTAMNYQSHPPGQLRLHCGSGVAVDLVLSGRDVPTPITAAGTE 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .......................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.0410 19 VSVASLR|AA 0.103 . LmjF.31.0410 27 AVAGDSR|KL 0.085 . LmjF.31.0410 28 VAGDSRK|LE 0.075 . LmjF.31.0410 31 DSRKLER|LE 0.082 . LmjF.31.0410 35 LERLEER|LS 0.074 . LmjF.31.0410 38 LEERLSR|SR 0.388 . LmjF.31.0410 40 ERLSRSR|DQ 0.086 . LmjF.31.0410 45 SRDQAAR|RA 0.095 . LmjF.31.0410 46 RDQAARR|AA 0.180 . LmjF.31.0410 51 RRAALEK|RI 0.073 . LmjF.31.0410 52 RAALEKR|IA 0.222 . LmjF.31.0410 64 GGIAVLR|EV 0.097 . LmjF.31.0410 68 VLREVAR|PA 0.100 . LmjF.31.0410 97 SFTSPAR|TV 0.109 . LmjF.31.0410 101 PARTVLR|HT 0.138 . LmjF.31.0410 113 ISGAWPR|RN 0.128 . LmjF.31.0410 114 SGAWPRR|NS 0.148 . LmjF.31.0410 145 PVPATWR|QK 0.079 . LmjF.31.0410 147 PATWRQK|TS 0.053 . LmjF.31.0410 152 QKTSVFR|YC 0.135 . LmjF.31.0410 173 DEGVLYR|II 0.125 . LmjF.31.0410 188 AFYNDTR|YY 0.090 . LmjF.31.0410 195 YYTVQVR|YR 0.084 . LmjF.31.0410 197 TVQVRYR|IT 0.131 . LmjF.31.0410 215 SVTVDGK|GA 0.085 . LmjF.31.0410 231 LGPEETK|VL 0.055 . LmjF.31.0410 246 GFENLCK|AT 0.058 . LmjF.31.0410 252 KATLLPR|RA 0.081 . LmjF.31.0410 253 ATLLPRR|AA 0.212 . LmjF.31.0410 286 DAALLDR|RS 0.067 . LmjF.31.0410 287 AALLDRR|SV 0.282 . LmjF.31.0410 297 TTHLVAR|CV 0.360 . LmjF.31.0410 301 VARCVEK|QI 0.077 . LmjF.31.0410 304 CVEKQIR|YV 0.134 . LmjF.31.0410 319 SHASLYR|DG 0.117 . LmjF.31.0410 333 IPPLHWR|LP 0.080 . LmjF.31.0410 341 PASYLPR|DD 0.130 . LmjF.31.0410 346 PRDDGVR|HE 0.078 . LmjF.31.0410 350 GVRHEVR|LF 0.090 . LmjF.31.0410 389 LWPQALR|CL 0.078 . LmjF.31.0410 402 QGAQEGK|RD 0.070 . LmjF.31.0410 403 GAQEGKR|DR 0.203 . LmjF.31.0410 405 QEGKRDR|AV 0.190 . LmjF.31.0410 413 VGAYHVR|LC 0.087 . LmjF.31.0410 421 CTGGWWR|LC 0.068 . LmjF.31.0410 446 HCADDLR|VL 0.072 . LmjF.31.0410 455 WLPLLEK|AC 0.062 . LmjF.31.0410 459 LEKACAK|SL 0.107 . LmjF.31.0410 477 PLEYFVR|AL 0.102 . LmjF.31.0410 488 GPCTVLR|EI 0.119 . LmjF.31.0410 503 LCDSTVK|AT 0.059 . LmjF.31.0410 506 STVKATR|FL 0.085 . LmjF.31.0410 512 RFLALMK|RL 0.057 . LmjF.31.0410 513 FLALMKR|LL 0.133 . LmjF.31.0410 518 KRLLLQR|TA 0.080 . LmjF.31.0410 534 WLQPHFR|GT 0.123 . LmjF.31.0410 538 HFRGTAR|TQ 0.108 . LmjF.31.0410 545 TQHIGDR|LV 0.128 . LmjF.31.0410 577 DGQCVAR|LR 0.091 . LmjF.31.0410 579 QCVARLR|QT 0.109 . LmjF.31.0410 584 LRQTAQK|RR 0.066 . LmjF.31.0410 585 RQTAQKR|RS 0.138 . LmjF.31.0410 586 QTAQKRR|SA 0.434 . LmjF.31.0410 596 SWLDLWR|RA 0.107 . LmjF.31.0410 597 WLDLWRR|AG 0.109 . LmjF.31.0410 600 LWRRAGK|SW 0.275 . LmjF.31.0410 648 SDWGTVK|VQ 0.062 . LmjF.31.0410 656 QGEFMQR|QP 0.093 . LmjF.31.0410 671 TVTAPTR|LL 0.078 . LmjF.31.0410 679 LASVTQR|DL 0.192 . LmjF.31.0410 692 LPTQAVK|LD 0.064 . LmjF.31.0410 714 SCLLYAK|GS 0.075 . LmjF.31.0410 745 LHFAYER|EV 0.104 . LmjF.31.0410 756 GHLLDPR|QG 0.067 . LmjF.31.0410 802 PESSTAR|VR 0.077 . LmjF.31.0410 804 SSTARVR|FM 0.125 . LmjF.31.0410 809 VRFMTAK|RG 0.071 . LmjF.31.0410 810 RFMTAKR|GT 0.163 . LmjF.31.0410 846 HPPGQLR|LH 0.102 . LmjF.31.0410 862 DLVLSGR|DV 0.123 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.0410 ATGGTGTTTCCTCATCACACGTTTCAGCTAGACGACGTATCTGTCGCGTCTCTGAGGGCT GCCGTCGCGGGGGATTCAAGGAAGCTGGAGCGACTGGAAGAACGTCTGTCACGCAGCCGT GACCAGGCTGCGCGTCGCGCAGCTCTGGAGAAGCGTATCGCGACACTGCACGGAGGAATT GCGGTGTTGCGAGAGGTGGCGCGGCCAGCGGCCTCACTGCCTCTGTTGGCGAACGCGACG GTGCCGTCCGATTCGAGCTTTCCGGTTTTCTCATTCACGTCTCCAGCGCGCACAGTCTTG CGCCACACGTCGTCTGGGATATCGGGTGCGTGGCCGCGACGCAACTCCCCGGCTGTCAGC ATGTCGTCAGCCCAGGACGAGTTCGACGAGACCACTATCCACCCCGACTCTCTACCGGTG CCTGCGACATGGAGGCAGAAGACCTCGGTCTTCCGGTACTGCGGGCCTTCTGTGGCGGGC GCAGTCTCCTCCGTGATTGATGAGGGGGTGCTCTACCGCATCATCACAGACGGTGGCGGC TGGGCCTTTTACAACGACACTCGATACTACACGGTGCAGGTGAGATACCGCATCACGGCT CAGTCGCCGGTGACCCCAGGACACTCCGTCACGGTAGACGGCAAAGGGGCGCAGCAGGAG CTGTCGATGGAGCTGGGGCCGGAGGAGACCAAGGTGTTGCTCACGGGCAGCGTGGTGGGC TTTGAGAATCTCTGCAAGGCGACACTGCTGCCGAGGCGCGCAGCGACGACCCAAGAGGAT CAGGCACTGTGCGCGGAGCCGCAGCAGCACTGGAGCGTCCTCGCCACCTCGTGCCCTGAT GCCGCGTTGCTGGACCGCCGTAGCGTGTCGACGACGCACCTCGTCGCCCGATGCGTGGAG AAGCAGATTCGGTATGTCGACCTGCATTTCTTTCCCAGCCACGCTTCCCTCTACCGTGAC GGCCAGGACAGCTTTTATATACCTCCTCTGCACTGGCGCCTGCCTGCGAGCTACCTCCCC AGGGATGACGGCGTCCGTCACGAGGTGCGTCTTTTTCACGGCCCCATCCTTCACCCTGAC GGTTTGCACGCGGGGCACCTGCTCCCCAACCACTTGCTGCTCTCTGTTGCAATCGGGCTT ACGTGCCTCTGGCCGCAGGCGCTGCGCTGCCTCTTCATTCATCCGCAGGGGGCACAGGAG GGCAAGCGCGACCGGGCTGTCGGGGCCTATCACGTGAGGCTATGCACAGGGGGCTGGTGG CGGCTCTGTGTCTTGGACGAGTTCTTTCCCGCGTCTGCACAGTGCCCCGAATTCAGCCAT TGTGCTGACGACCTGCGGGTGCTGTGGCTGCCTCTGCTGGAGAAGGCGTGCGCAAAGTCG CTCGGCTCCTACGCTGCAATGCTGGGGGTCCCTCTGGAATACTTTGTCCGTGCGCTCACT GGAGGGCCTTGCACAGTGCTGCGCGAGATCTGGCCAGCACACGAGGACTTGTGCGACTCC ACCGTCAAGGCAACTCGTTTCCTTGCGCTCATGAAGAGGCTGCTGTTGCAACGAACGGCG GAGATGCCGAGCGTGGTGTGTTGGCTGCAACCCCACTTTCGCGGCACCGCCCGCACACAG CACATAGGCGATCGGCTGGTGGTGCTGTACGAGGATATCGGACTCGACCCTAATATCGCC ACCGTGGTGCTAGGGCTTGAGACGCTCGGCGATGGGCAGTGCGTCGCGCGTCTGCGTCAG ACGGCCCAGAAGAGGAGGTCGGCGGAGTCGTGGCTTGACCTTTGGCGCCGCGCCGGAAAG TCGTGGGTGGACGAGGTGAGCGATCTCGTGTTCGCCATGGAGGAGTCGGCGGGGGACACG GTGTGGATGGCGCTGGAGGACTTACCGCAGTACTTCCAAGGCGGCTGTGTGGCACCACTG ACGAGTGACTGGGGTACGGTGAAGGTGCAGGGTGAGTTTATGCAGCGCCAGCCGTCTGTG GTGCTGGAGGTGACAGTGACAGCACCGACGCGCCTCTTGGCGAGCGTTACGCAGAGGGAC CTCGATGAGGCTGGTTTGCCGACGCAGGCAGTGAAGCTTGACAATACCTCAATCGGTGCA AGTCAAGCATTAGCGGGGCTGAGCTGCCTGCTGTACGCCAAGGGAAGCGGCGACAGTACT CACTTTTATGGCAGCAGCGGCAGCACTCCCGATGCGTTCGAGGTTGCCCAAGAGCTGCAT TTCGCGTACGAGCGTGAGGTGACTGCCGGGCATTTGCTAGACCCGCGCCAGGGCCCCTAC TATGTGGCGCCGTTTGTGCACGCCGCTTCGTTCGATGTGGCGTACACCATAACAGTCCAA CTAATCGGGGCAGACTCGGTGTCCTCTGCGGCGCCGCTGGGAGCTCCTGAGAGCAGCACG GCGAGAGTGCGCTTCATGACGGCGAAACGAGGGACCGCTCTCTTTCAGAATCTTACTCAG CCGATCCTCCTTGAGTCCTCGATGGAGGTGAGCTCGACAGCCATGAACTACCAAAGTCAC CCACCAGGGCAACTGCGCCTGCACTGCGGCTCGGGAGTGGCCGTCGATCTCGTGCTCAGT GGCCGCGATGTGCCAACGCCAATAACAGCGGCAGGCACCGAATGA
  • Download Fasta

  • Fasta :-

    MVFPHHTFQLDDVSVASLRAAVAGDSRKLERLEERLSRSRDQAARRAALEKRIATLHGGI AVLREVARPAASLPLLANATVPSDSSFPVFSFTSPARTVLRHTSSGISGAWPRRNSPAVS MSSAQDEFDETTIHPDSLPVPATWRQKTSVFRYCGPSVAGAVSSVIDEGVLYRIITDGGG WAFYNDTRYYTVQVRYRITAQSPVTPGHSVTVDGKGAQQELSMELGPEETKVLLTGSVVG FENLCKATLLPRRAATTQEDQALCAEPQQHWSVLATSCPDAALLDRRSVSTTHLVARCVE KQIRYVDLHFFPSHASLYRDGQDSFYIPPLHWRLPASYLPRDDGVRHEVRLFHGPILHPD GLHAGHLLPNHLLLSVAIGLTCLWPQALRCLFIHPQGAQEGKRDRAVGAYHVRLCTGGWW RLCVLDEFFPASAQCPEFSHCADDLRVLWLPLLEKACAKSLGSYAAMLGVPLEYFVRALT GGPCTVLREIWPAHEDLCDSTVKATRFLALMKRLLLQRTAEMPSVVCWLQPHFRGTARTQ HIGDRLVVLYEDIGLDPNIATVVLGLETLGDGQCVARLRQTAQKRRSAESWLDLWRRAGK SWVDEVSDLVFAMEESAGDTVWMALEDLPQYFQGGCVAPLTSDWGTVKVQGEFMQRQPSV VLEVTVTAPTRLLASVTQRDLDEAGLPTQAVKLDNTSIGASQALAGLSCLLYAKGSGDST HFYGSSGSTPDAFEVAQELHFAYEREVTAGHLLDPRQGPYYVAPFVHAASFDVAYTITVQ LIGADSVSSAAPLGAPESSTARVRFMTAKRGTALFQNLTQPILLESSMEVSSTAMNYQSH PPGQLRLHCGSGVAVDLVLSGRDVPTPITAAGTE

  • title: catalytic site
  • coordinates: H371,I559,Q580
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.0410590 SRSAESWLDL0.994unspLmjF.31.0410590 SRSAESWLDL0.994unspLmjF.31.0410590 SRSAESWLDL0.994unspLmjF.31.0410601 SRAGKSWVDE0.997unspLmjF.31.041037 SEERLSRSRD0.99unspLmjF.31.0410587 SQKRRSAESW0.997unsp

LmjF.31.0410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India