LmjF.31.0430 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.0430OTHER0.9999700.0000300.000000
No Results

  • Fasta :-

    >LmjF.31.0430 MDGNAIRSICDEDVVTDAMLEEFLHPSSSLALTDTVGDMLTASTLGSAVRGPVPCILAAA GTSALGAGSSSTFKDLHSSEVNQIGVEGTEGSVVHCASHLVGTSLVLPVELSHSHITSDD SGDFAFFTSDVRDADAYDLIRHYVLYCKQQEKELEDLEAECARLEAEQQHLYSAAIAADM TRSMHLSAADSLSPTNSNEVSATGTGGVSSSAAVDEFGEAHIDPLKLCPYMDPHDAAHNP QPYRYGQPAIHGLYTPAFKNGILYRCVSADRSWIFYNDSEQYTMHIKYIFGASSVITAGP HASVKQRASGEYEVQVTVWPQETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASAR ALLDRFAQQSGKPNVSLLSTEDVLECCAGQASELAAAVGSWNGQHFVDPDFPPCGTSLYR KGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGDVYLCSAACCLAEH PKQVARIFRHPVSADAGSRERAVGAYRVTLSHGGWWTSTVLDSYLPASLKGPNLGRCSHD LRKLWYPLLEKAYAKLHGSYAAIQCGSPLEALQDLTGFPTFHFYDRWAEASWSGAGARAS EHTSYSPLSEHLFTSLEEKVHQRGYLVCLCLPDDGPTEAQAAQMGMVFGMSYAVLRLVRH GSVRLLQIRCPTLKLCSRGLWCAGSARWQQEPQLARLCGMDGDGGPELATLWLDWSEALA MFEGGGVCCSRWDWAYDCRARGFFKDGIPSFVLEVSVDASVESASPVEAYCILSQEDDRG MSPDHPNRELRPLMLSVSSHCGDDEAGEGVGGESLVDQRIRHVCSTDPDTPTEQLNYVLG RDTALRVTFQPSTHPYYVIPRSRGEMPDKLFTLGFVSATAPTKTGKLRMRAVQLPSNSAV FHNRHSFSTRQLESVAAVPFQIRGPDGVARVGCGSSIA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/556 Sequence name : 556 Sequence length : 938 VALUES OF COMPUTED PARAMETERS Coef20 : 3.774 CoefTot : 0.000 ChDiff : -37 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.559 1.529 0.340 0.561 MesoH : 0.275 0.563 -0.124 0.296 MuHd_075 : 48.230 30.015 13.282 8.408 MuHd_095 : 3.566 9.522 3.236 2.719 MuHd_100 : 10.342 2.702 1.379 2.126 MuHd_105 : 14.438 6.959 2.676 3.609 Hmax_075 : 17.850 22.283 5.392 6.008 Hmax_095 : -3.100 7.700 -0.355 1.846 Hmax_100 : 4.300 7.400 -0.549 2.790 Hmax_105 : -6.100 4.600 -0.781 2.018 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8983 0.1017 DFMC : 0.8066 0.1934
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 938 LmjF.31.0430 MDGNAIRSICDEDVVTDAMLEEFLHPSSSLALTDTVGDMLTASTLGSAVRGPVPCILAAAGTSALGAGSSSTFKDLHSSE 80 VNQIGVEGTEGSVVHCASHLVGTSLVLPVELSHSHITSDDSGDFAFFTSDVRDADAYDLIRHYVLYCKQQEKELEDLEAE 160 CARLEAEQQHLYSAAIAADMTRSMHLSAADSLSPTNSNEVSATGTGGVSSSAAVDEFGEAHIDPLKLCPYMDPHDAAHNP 240 QPYRYGQPAIHGLYTPAFKNGILYRCVSADRSWIFYNDSEQYTMHIKYIFGASSVITAGPHASVKQRASGEYEVQVTVWP 320 QETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASARALLDRFAQQSGKPNVSLLSTEDVLECCAGQASELAAAVGS 400 WNGQHFVDPDFPPCGTSLYRKGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGDVYLCSAACCLAEH 480 PKQVARIFRHPVSADAGSRERAVGAYRVTLSHGGWWTSTVLDSYLPASLKGPNLGRCSHDLRKLWYPLLEKAYAKLHGSY 560 AAIQCGSPLEALQDLTGFPTFHFYDRWAEASWSGAGARASEHTSYSPLSEHLFTSLEEKVHQRGYLVCLCLPDDGPTEAQ 640 AAQMGMVFGMSYAVLRLVRHGSVRLLQIRCPTLKLCSRGLWCAGSARWQQEPQLARLCGMDGDGGPELATLWLDWSEALA 720 MFEGGGVCCSRWDWAYDCRARGFFKDGIPSFVLEVSVDASVESASPVEAYCILSQEDDRGMSPDHPNRELRPLMLSVSSH 800 CGDDEAGEGVGGESLVDQRIRHVCSTDPDTPTEQLNYVLGRDTALRVTFQPSTHPYYVIPRSRGEMPDKLFTLGFVSATA 880 PTKTGKLRMRAVQLPSNSAVFHNRHSFSTRQLESVAAVPFQIRGPDGVARVGCGSSIA 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.0430 7 MDGNAIR|SI 0.166 . LmjF.31.0430 50 TLGSAVR|GP 0.091 . LmjF.31.0430 74 GSSSTFK|DL 0.112 . LmjF.31.0430 132 FFTSDVR|DA 0.087 . LmjF.31.0430 141 DAYDLIR|HY 0.071 . LmjF.31.0430 148 HYVLYCK|QQ 0.066 . LmjF.31.0430 152 YCKQQEK|EL 0.073 . LmjF.31.0430 163 LEAECAR|LE 0.093 . LmjF.31.0430 182 IAADMTR|SM 0.133 . LmjF.31.0430 226 AHIDPLK|LC 0.056 . LmjF.31.0430 244 HNPQPYR|YG 0.116 . LmjF.31.0430 259 LYTPAFK|NG 0.055 . LmjF.31.0430 265 KNGILYR|CV 0.203 . LmjF.31.0430 271 RCVSADR|SW 0.107 . LmjF.31.0430 287 QYTMHIK|YI 0.069 . LmjF.31.0430 305 GPHASVK|QR 0.075 . LmjF.31.0430 307 HASVKQR|AS 0.275 . LmjF.31.0430 335 GQVNGFK|NL 0.065 . LmjF.31.0430 360 ASTASAR|AL 0.114 . LmjF.31.0430 365 ARALLDR|FA 0.169 . LmjF.31.0430 372 FAQQSGK|PN 0.065 . LmjF.31.0430 420 CGTSLYR|KG 0.067 . LmjF.31.0430 421 GTSLYRK|GV 0.236 . LmjF.31.0430 434 LWDMSWR|RP 0.093 . LmjF.31.0430 435 WDMSWRR|PC 0.130 . LmjF.31.0430 445 YLPASQR|SE 0.088 . LmjF.31.0430 453 EACLFAR|SV 0.198 . LmjF.31.0430 482 CLAEHPK|QV 0.101 . LmjF.31.0430 486 HPKQVAR|IF 0.113 . LmjF.31.0430 489 QVARIFR|HP 0.232 . LmjF.31.0430 499 SADAGSR|ER 0.068 . LmjF.31.0430 501 DAGSRER|AV 0.169 . LmjF.31.0430 507 RAVGAYR|VT 0.081 . LmjF.31.0430 530 YLPASLK|GP 0.060 . LmjF.31.0430 536 KGPNLGR|CS 0.089 . LmjF.31.0430 542 RCSHDLR|KL 0.091 . LmjF.31.0430 543 CSHDLRK|LW 0.085 . LmjF.31.0430 551 WYPLLEK|AY 0.053 . LmjF.31.0430 555 LEKAYAK|LH 0.065 . LmjF.31.0430 586 TFHFYDR|WA 0.165 . LmjF.31.0430 598 WSGAGAR|AS 0.105 . LmjF.31.0430 619 FTSLEEK|VH 0.060 . LmjF.31.0430 623 EEKVHQR|GY 0.095 . LmjF.31.0430 656 MSYAVLR|LV 0.120 . LmjF.31.0430 659 AVLRLVR|HG 0.182 . LmjF.31.0430 664 VRHGSVR|LL 0.107 . LmjF.31.0430 669 VRLLQIR|CP 0.080 . LmjF.31.0430 674 IRCPTLK|LC 0.076 . LmjF.31.0430 678 TLKLCSR|GL 0.102 . LmjF.31.0430 687 WCAGSAR|WQ 0.093 . LmjF.31.0430 696 QEPQLAR|LC 0.095 . LmjF.31.0430 731 GGVCCSR|WD 0.086 . LmjF.31.0430 739 DWAYDCR|AR 0.090 . LmjF.31.0430 741 AYDCRAR|GF 0.089 . LmjF.31.0430 745 RARGFFK|DG 0.083 . LmjF.31.0430 779 LSQEDDR|GM 0.092 . LmjF.31.0430 788 SPDHPNR|EL 0.107 . LmjF.31.0430 791 HPNRELR|PL 0.358 . LmjF.31.0430 819 ESLVDQR|IR 0.071 . LmjF.31.0430 821 LVDQRIR|HV 0.117 . LmjF.31.0430 841 LNYVLGR|DT 0.113 . LmjF.31.0430 846 GRDTALR|VT 0.086 . LmjF.31.0430 861 PYYVIPR|SR 0.133 . LmjF.31.0430 863 YVIPRSR|GE 0.077 . LmjF.31.0430 869 RGEMPDK|LF 0.066 . LmjF.31.0430 883 SATAPTK|TG 0.057 . LmjF.31.0430 886 APTKTGK|LR 0.063 . LmjF.31.0430 888 TKTGKLR|MR 0.121 . LmjF.31.0430 890 TGKLRMR|AV 0.110 . LmjF.31.0430 904 SAVFHNR|HS 0.105 . LmjF.31.0430 910 RHSFSTR|QL 0.163 . LmjF.31.0430 923 AVPFQIR|GP 0.089 . LmjF.31.0430 930 GPDGVAR|VG 0.100 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.0430 ATGGACGGCAACGCCATCCGCTCCATTTGCGACGAAGACGTCGTCACGGATGCCATGCTG GAGGAGTTCCTGCATCCGTCGTCATCGTTAGCCTTGACAGACACCGTGGGCGATATGCTG ACTGCCTCTACCCTTGGCAGCGCGGTGCGAGGACCGGTTCCCTGCATACTTGCAGCGGCC GGCACGTCCGCGTTGGGGGCTGGCTCCTCGTCAACCTTCAAAGACTTGCACAGTAGCGAG GTTAACCAAATCGGCGTGGAGGGCACCGAGGGAAGTGTTGTGCATTGTGCAAGTCATCTC GTCGGCACCAGCCTTGTACTGCCGGTGGAACTGTCGCACTCGCATATCACGAGCGACGAC AGCGGCGACTTTGCTTTTTTCACGAGCGATGTGCGCGATGCCGACGCGTACGACCTCATT CGTCACTATGTGCTGTATTGCAAGCAGCAGGAGAAGGAGCTGGAGGATCTGGAGGCGGAA TGCGCACGGCTGGAGGCGGAGCAACAGCACCTCTACAGCGCCGCTATTGCGGCTGACATG ACTCGATCGATGCACCTGTCGGCTGCCGATTCTCTGTCTCCGACGAACTCGAACGAAGTT TCGGCAACAGGAACCGGCGGCGTCTCCTCGTCAGCCGCTGTCGACGAGTTCGGCGAGGCT CACATCGACCCGCTGAAGTTGTGCCCTTACATGGATCCACATGATGCCGCTCACAACCCG CAGCCGTATCGCTACGGACAGCCCGCCATCCATGGACTCTACACCCCGGCCTTCAAGAAT GGCATTCTCTACCGCTGCGTTTCGGCCGACAGGTCGTGGATATTTTACAACGACTCGGAG CAGTACACGATGCACATAAAGTATATCTTCGGCGCCTCATCCGTCATTACGGCCGGTCCG CACGCCTCGGTGAAGCAGCGGGCGTCGGGCGAGTATGAGGTGCAAGTGACAGTCTGGCCA CAGGAGACGGAGGTGCTGCTTGTAGGCCAAGTGAACGGCTTCAAGAATCTCTCTTCCGCC GTGCCAGTCAATTCCAGCTATACGAATCCACACGCCAGTGCCTCCACCGCATCTGCGCGC GCTCTGCTGGACCGCTTCGCCCAACAGTCAGGAAAGCCGAATGTCTCGCTGCTCTCCACG GAGGACGTGCTGGAGTGTTGTGCGGGCCAAGCCAGCGAGTTGGCCGCCGCCGTCGGGTCT TGGAATGGGCAACATTTTGTCGACCCCGACTTTCCGCCTTGTGGCACATCGCTTTACCGC AAAGGTGTCGATGACGTCTTCCTCTGGGATATGTCCTGGCGGCGCCCCTGCGAGTACCTG CCCGCCTCACAGCGCTCGGAAGCGTGCCTCTTCGCTCGCTCGGTGCTTCCGACAGACCCT TGTGCGGGGGAAGGCGGTGACGTGTACCTGTGCAGTGCTGCCTGCTGTCTCGCTGAGCAC CCCAAGCAGGTCGCTCGAATTTTTCGGCACCCCGTCTCTGCGGATGCCGGCAGCCGCGAG CGCGCTGTCGGGGCATACCGCGTCACACTGAGCCACGGCGGCTGGTGGACGTCGACCGTC CTCGATAGTTACTTGCCAGCGTCGCTCAAGGGCCCGAACCTGGGCCGCTGCTCTCACGAC TTGCGCAAGCTCTGGTATCCGCTGCTCGAAAAGGCGTACGCGAAGCTGCACGGTTCCTAC GCCGCCATCCAATGCGGTAGCCCGCTCGAGGCGCTGCAGGATCTCACCGGATTTCCGACG TTTCACTTCTATGATCGATGGGCGGAGGCGTCGTGGAGCGGTGCCGGCGCCCGCGCGAGC GAACACACCTCCTACAGCCCACTGTCCGAGCACCTGTTCACCTCTCTCGAGGAGAAGGTG CATCAACGCGGCTATCTCGTGTGCCTGTGCCTGCCGGACGACGGGCCGACCGAGGCCCAG GCAGCGCAGATGGGCATGGTGTTCGGCATGTCATACGCGGTGCTGCGACTCGTTCGGCAC GGCAGCGTTCGGCTTCTTCAAATTCGGTGCCCCACCTTGAAGCTCTGTAGCCGCGGGCTG TGGTGTGCCGGGAGCGCGCGGTGGCAGCAGGAGCCGCAGCTAGCCCGCTTGTGCGGGATG GATGGTGATGGCGGGCCGGAGCTCGCGACTTTGTGGTTGGACTGGTCTGAGGCTCTAGCT ATGTTTGAGGGTGGCGGCGTGTGCTGTAGTCGTTGGGACTGGGCATATGACTGCCGTGCG CGAGGGTTCTTCAAAGACGGGATACCCTCTTTCGTCTTGGAGGTGAGCGTCGACGCCTCT GTGGAGAGCGCAAGTCCCGTGGAAGCGTACTGCATCTTGTCCCAGGAGGACGATCGCGGT ATGTCTCCAGATCACCCGAACCGAGAGCTGCGCCCACTGATGCTCTCTGTCAGCAGCCAT TGCGGTGACGATGAGGCGGGCGAGGGTGTCGGCGGGGAGTCCTTGGTTGATCAGCGCATT CGGCATGTGTGCTCCACGGACCCAGACACCCCCACAGAGCAGCTGAACTACGTCCTAGGT CGCGATACGGCGCTCCGTGTCACCTTTCAGCCCTCAACGCATCCGTACTATGTTATTCCT CGCTCGCGGGGGGAGATGCCCGACAAGCTCTTCACACTGGGTTTTGTCTCCGCCACAGCG CCCACAAAAACGGGGAAGCTGAGGATGCGGGCGGTGCAGCTCCCGTCTAACTCTGCGGTG TTTCACAACCGACACAGCTTCTCGACGCGGCAACTCGAGAGCGTGGCGGCGGTGCCGTTT CAGATTCGCGGGCCGGACGGGGTTGCACGCGTAGGGTGCGGCAGCAGCATTGCCTGA
  • Download Fasta

  • Fasta :-

    MDGNAIRSICDEDVVTDAMLEEFLHPSSSLALTDTVGDMLTASTLGSAVRGPVPCILAAA GTSALGAGSSSTFKDLHSSEVNQIGVEGTEGSVVHCASHLVGTSLVLPVELSHSHITSDD SGDFAFFTSDVRDADAYDLIRHYVLYCKQQEKELEDLEAECARLEAEQQHLYSAAIAADM TRSMHLSAADSLSPTNSNEVSATGTGGVSSSAAVDEFGEAHIDPLKLCPYMDPHDAAHNP QPYRYGQPAIHGLYTPAFKNGILYRCVSADRSWIFYNDSEQYTMHIKYIFGASSVITAGP HASVKQRASGEYEVQVTVWPQETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASAR ALLDRFAQQSGKPNVSLLSTEDVLECCAGQASELAAAVGSWNGQHFVDPDFPPCGTSLYR KGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGDVYLCSAACCLAEH PKQVARIFRHPVSADAGSRERAVGAYRVTLSHGGWWTSTVLDSYLPASLKGPNLGRCSHD LRKLWYPLLEKAYAKLHGSYAAIQCGSPLEALQDLTGFPTFHFYDRWAEASWSGAGARAS EHTSYSPLSEHLFTSLEEKVHQRGYLVCLCLPDDGPTEAQAAQMGMVFGMSYAVLRLVRH GSVRLLQIRCPTLKLCSRGLWCAGSARWQQEPQLARLCGMDGDGGPELATLWLDWSEALA MFEGGGVCCSRWDWAYDCRARGFFKDGIPSFVLEVSVDASVESASPVEAYCILSQEDDRG MSPDHPNRELRPLMLSVSSHCGDDEAGEGVGGESLVDQRIRHVCSTDPDTPTEQLNYVLG RDTALRVTFQPSTHPYYVIPRSRGEMPDKLFTLGFVSATAPTKTGKLRMRAVQLPSNSAV FHNRHSFSTRQLESVAAVPFQIRGPDGVARVGCGSSIA

  • title: catalytic site
  • coordinates: V468,M650,C670
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.0430379 SVSLLSTEDV0.99unspLmjF.31.0430379 SVSLLSTEDV0.99unspLmjF.31.0430379 SVSLLSTEDV0.99unspLmjF.31.0430498 SADAGSRERA0.994unspLmjF.31.0430765 SVESASPVEA0.996unspLmjF.31.0430774 SYCILSQEDD0.995unspLmjF.31.0430814 SVGGESLVDQ0.993unspLmjF.31.04308 SNAIRSICDE0.991unspLmjF.31.0430309 SKQRASGEYE0.992unsp

LmjF.31.0430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India