LmjF.31.0460 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.0460OTHER0.9997950.0001450.000060
No Results

  • Fasta :-

    >LmjF.31.0460 MALCGGSCTTSNAEKHYHQKKVHDFNYGGPAVKGECYPLFEDGRCYRVEVDRHKWFLYND SLDMEMHVTFTFQKTTAVYKAQHGRTTVRKTPKGGTQCSVVVYPLETLPYVKFAKKTQIS YSAACMSRDLAPGYIEKVNREAKAKCVNETQKVAGVAGVSRNEEEILYKCRKSKIPYIDM HFHPSEAALRRPHDKQSVANMHAITWKRPQDYIPVIAHKEIKLFRHDVSAAGIGQGHLGD CWLMCSIAVVAESKTMVKDIFRHPVSQSKQKKEERAGGYRVCINKNGWFHNVIVDSYLPT YNGVLYFARSAGDPYELWVPLLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTW KAAANREEVASQFFKDLLRYRKNGYLISISTPDTHTSVYNAGSGNANEAVLEARYKAAGL STGHSYSVLKVRQFVIPRVRLLKIRNPWGSGDEWTGAWGKNSTKWQKHSLVRRSCKPSKV SDGTFWIEWMDAVQFFEGGGVCMVKKAWYQYRFPGQFFGIIPSVVLKIELKKQQKMLFTL SQKDCRLRSPDDPDQLYKGLLISVTGHNAEKGMQQIVALSTDNPEVHPPEKYEYMLARDV GLELELDPAQGPFYVIPRIMATNQNDPMDFTLGMLTPRKSTARGLRVSCVHLPDTCPTFR NVVSFHMNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKPAYPFP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/599 Sequence name : 599 Sequence length : 707 VALUES OF COMPUTED PARAMETERS Coef20 : 3.344 CoefTot : -0.006 ChDiff : 30 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.882 1.335 0.091 0.531 MesoH : -0.302 0.152 -0.367 0.273 MuHd_075 : 7.623 8.666 4.204 2.098 MuHd_095 : 12.415 3.674 3.019 3.291 MuHd_100 : 11.061 3.350 1.498 3.295 MuHd_105 : 10.726 5.357 2.932 2.892 Hmax_075 : 5.900 5.400 1.844 2.110 Hmax_095 : 9.013 1.750 0.383 2.625 Hmax_100 : 8.700 4.300 0.765 2.980 Hmax_105 : 7.583 3.617 0.539 2.765 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9519 0.0481 DFMC : 0.9460 0.0540
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 707 LmjF.31.0460 MALCGGSCTTSNAEKHYHQKKVHDFNYGGPAVKGECYPLFEDGRCYRVEVDRHKWFLYNDSLDMEMHVTFTFQKTTAVYK 80 AQHGRTTVRKTPKGGTQCSVVVYPLETLPYVKFAKKTQISYSAACMSRDLAPGYIEKVNREAKAKCVNETQKVAGVAGVS 160 RNEEEILYKCRKSKIPYIDMHFHPSEAALRRPHDKQSVANMHAITWKRPQDYIPVIAHKEIKLFRHDVSAAGIGQGHLGD 240 CWLMCSIAVVAESKTMVKDIFRHPVSQSKQKKEERAGGYRVCINKNGWFHNVIVDSYLPTYNGVLYFARSAGDPYELWVP 320 LLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTWKAAANREEVASQFFKDLLRYRKNGYLISISTPDTHTSVYN 400 AGSGNANEAVLEARYKAAGLSTGHSYSVLKVRQFVIPRVRLLKIRNPWGSGDEWTGAWGKNSTKWQKHSLVRRSCKPSKV 480 SDGTFWIEWMDAVQFFEGGGVCMVKKAWYQYRFPGQFFGIIPSVVLKIELKKQQKMLFTLSQKDCRLRSPDDPDQLYKGL 560 LISVTGHNAEKGMQQIVALSTDNPEVHPPEKYEYMLARDVGLELELDPAQGPFYVIPRIMATNQNDPMDFTLGMLTPRKS 640 TARGLRVSCVHLPDTCPTFRNVVSFHMNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKPAYPFP 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.0460 15 TTSNAEK|HY 0.082 . LmjF.31.0460 20 EKHYHQK|KV 0.102 . LmjF.31.0460 21 KHYHQKK|VH 0.108 . LmjF.31.0460 33 YGGPAVK|GE 0.057 . LmjF.31.0460 44 PLFEDGR|CY 0.083 . LmjF.31.0460 47 EDGRCYR|VE 0.165 . LmjF.31.0460 52 YRVEVDR|HK 0.091 . LmjF.31.0460 54 VEVDRHK|WF 0.056 . LmjF.31.0460 74 VTFTFQK|TT 0.062 . LmjF.31.0460 80 KTTAVYK|AQ 0.061 . LmjF.31.0460 85 YKAQHGR|TT 0.108 . LmjF.31.0460 89 HGRTTVR|KT 0.122 . LmjF.31.0460 90 GRTTVRK|TP 0.098 . LmjF.31.0460 93 TVRKTPK|GG 0.076 . LmjF.31.0460 112 ETLPYVK|FA 0.066 . LmjF.31.0460 115 PYVKFAK|KT 0.072 . LmjF.31.0460 116 YVKFAKK|TQ 0.072 . LmjF.31.0460 128 SAACMSR|DL 0.134 . LmjF.31.0460 137 APGYIEK|VN 0.061 . LmjF.31.0460 140 YIEKVNR|EA 0.115 . LmjF.31.0460 143 KVNREAK|AK 0.229 . LmjF.31.0460 145 NREAKAK|CV 0.104 . LmjF.31.0460 152 CVNETQK|VA 0.086 . LmjF.31.0460 161 GVAGVSR|NE 0.093 . LmjF.31.0460 169 EEEILYK|CR 0.062 . LmjF.31.0460 171 EILYKCR|KS 0.075 . LmjF.31.0460 172 ILYKCRK|SK 0.160 . LmjF.31.0460 174 YKCRKSK|IP 0.137 . LmjF.31.0460 190 PSEAALR|RP 0.081 . LmjF.31.0460 191 SEAALRR|PH 0.184 . LmjF.31.0460 195 LRRPHDK|QS 0.091 . LmjF.31.0460 207 MHAITWK|RP 0.070 . LmjF.31.0460 208 HAITWKR|PQ 0.169 . LmjF.31.0460 219 IPVIAHK|EI 0.066 . LmjF.31.0460 222 IAHKEIK|LF 0.068 . LmjF.31.0460 225 KEIKLFR|HD 0.083 . LmjF.31.0460 254 AVVAESK|TM 0.056 . LmjF.31.0460 258 ESKTMVK|DI 0.075 . LmjF.31.0460 262 MVKDIFR|HP 0.075 . LmjF.31.0460 269 HPVSQSK|QK 0.067 . LmjF.31.0460 271 VSQSKQK|KE 0.074 . LmjF.31.0460 272 SQSKQKK|EE 0.187 . LmjF.31.0460 275 KQKKEER|AG 0.092 . LmjF.31.0460 280 ERAGGYR|VC 0.086 . LmjF.31.0460 285 YRVCINK|NG 0.059 . LmjF.31.0460 309 GVLYFAR|SA 0.200 . LmjF.31.0460 324 WVPLLEK|AY 0.058 . LmjF.31.0460 328 LEKAYAK|LH 0.065 . LmjF.31.0460 361 SFTNTWK|AA 0.071 . LmjF.31.0460 366 WKAAANR|EE 0.093 . LmjF.31.0460 375 VASQFFK|DL 0.086 . LmjF.31.0460 379 FFKDLLR|YR 0.073 . LmjF.31.0460 381 KDLLRYR|KN 0.087 . LmjF.31.0460 382 DLLRYRK|NG 0.104 . LmjF.31.0460 414 EAVLEAR|YK 0.127 . LmjF.31.0460 416 VLEARYK|AA 0.081 . LmjF.31.0460 430 HSYSVLK|VR 0.060 . LmjF.31.0460 432 YSVLKVR|QF 0.086 . LmjF.31.0460 438 RQFVIPR|VR 0.067 . LmjF.31.0460 440 FVIPRVR|LL 0.074 . LmjF.31.0460 443 PRVRLLK|IR 0.113 . LmjF.31.0460 445 VRLLKIR|NP 0.100 . LmjF.31.0460 460 WTGAWGK|NS 0.068 . LmjF.31.0460 464 WGKNSTK|WQ 0.064 . LmjF.31.0460 467 NSTKWQK|HS 0.060 . LmjF.31.0460 472 QKHSLVR|RS 0.079 . LmjF.31.0460 473 KHSLVRR|SC 0.385 . LmjF.31.0460 476 LVRRSCK|PS 0.177 . LmjF.31.0460 479 RSCKPSK|VS 0.070 . LmjF.31.0460 505 GGVCMVK|KA 0.069 . LmjF.31.0460 506 GVCMVKK|AW 0.136 . LmjF.31.0460 512 KAWYQYR|FP 0.174 . LmjF.31.0460 527 IPSVVLK|IE 0.070 . LmjF.31.0460 531 VLKIELK|KQ 0.062 . LmjF.31.0460 532 LKIELKK|QQ 0.087 . LmjF.31.0460 535 ELKKQQK|ML 0.065 . LmjF.31.0460 543 LFTLSQK|DC 0.056 . LmjF.31.0460 546 LSQKDCR|LR 0.087 . LmjF.31.0460 548 QKDCRLR|SP 0.104 . LmjF.31.0460 558 DPDQLYK|GL 0.068 . LmjF.31.0460 571 TGHNAEK|GM 0.072 . LmjF.31.0460 591 EVHPPEK|YE 0.062 . LmjF.31.0460 598 YEYMLAR|DV 0.233 . LmjF.31.0460 618 PFYVIPR|IM 0.087 . LmjF.31.0460 638 LGMLTPR|KS 0.084 . LmjF.31.0460 639 GMLTPRK|ST 0.127 . LmjF.31.0460 643 PRKSTAR|GL 0.142 . LmjF.31.0460 646 STARGLR|VS 0.249 . LmjF.31.0460 660 DTCPTFR|NV 0.088 . LmjF.31.0460 680 HVQFQYK|KR 0.077 . LmjF.31.0460 681 VQFQYKK|RG 0.084 . LmjF.31.0460 682 QFQYKKR|GG 0.200 . LmjF.31.0460 687 KRGGAPR|VK 0.109 . LmjF.31.0460 689 GGAPRVK|AG 0.069 . LmjF.31.0460 701 FEATNVK|PA 0.064 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.0460 CTGCAGTCCTTTCACCGACTAATGGCGCTCTGCGGCGGCAGCTGCACCACGAGCAATGCA GAGAAGCACTATCACCAGAAGAAGGTGCACGACTTCAACTATGGCGGCCCTGCGGTCAAG GGGGAGTGCTACCCCCTCTTTGAAGACGGCCGATGCTACCGGGTAGAGGTAGACAGGCAC AAGTGGTTCCTCTACAACGACTCGCTGGACATGGAGATGCACGTCACCTTTACCTTCCAA AAAACGACGGCCGTGTACAAAGCACAGCATGGCCGGACGACGGTGAGGAAGACACCCAAG GGTGGGACGCAGTGCTCCGTCGTTGTCTATCCCTTGGAGACGCTGCCGTACGTGAAGTTC GCCAAGAAGACGCAGATCTCGTACAGCGCCGCGTGCATGTCGCGCGACTTGGCCCCGGGC TACATTGAGAAGGTTAACCGCGAGGCGAAGGCGAAATGCGTGAACGAGACGCAAAAAGTA GCCGGCGTGGCTGGGGTGAGCCGCAACGAGGAGGAAATCCTGTACAAGTGCCGCAAGAGC AAGATCCCATACATCGACATGCACTTCCACCCATCTGAGGCTGCTCTGAGGCGACCTCAC GACAAGCAGAGCGTGGCAAACATGCACGCCATCACGTGGAAACGGCCGCAGGACTACATA CCGGTGATAGCGCACAAGGAGATCAAGCTGTTCCGCCACGACGTGAGCGCTGCCGGCATT GGGCAGGGTCACCTCGGCGACTGCTGGCTCATGTGCTCGATCGCGGTCGTGGCGGAGAGC AAGACAATGGTGAAGGATATCTTCCGCCACCCTGTCTCCCAGTCCAAGCAAAAAAAAGAG GAGCGGGCGGGCGGCTACCGCGTGTGCATCAATAAGAACGGCTGGTTCCACAACGTCATT GTGGACAGCTACCTGCCGACGTACAACGGAGTCCTTTACTTTGCCCGCTCCGCTGGGGAC CCTTATGAGTTGTGGGTGCCGCTCCTGGAGAAGGCGTACGCCAAGCTGCACGGCTCGTAC GCATCCATTGTCGGCGGCAATCCTCTCCACGCCCTGCAGGATTTGACGGGGTTTCCGGTG TACTCCTTCACAAACACGTGGAAGGCGGCAGCGAACAGGGAGGAGGTTGCATCGCAGTTC TTCAAGGACCTGCTGCGCTACCGCAAGAATGGCTACCTCATCTCCATCAGCACTCCAGAC ACGCACACGAGCGTGTACAACGCTGGTAGCGGGAATGCGAACGAGGCTGTACTCGAGGCG CGCTACAAGGCGGCGGGTCTGAGCACAGGCCACTCCTACTCGGTGCTGAAGGTGCGGCAG TTTGTCATTCCGCGAGTGAGGCTGCTGAAGATCCGTAACCCGTGGGGAAGCGGTGACGAG TGGACCGGCGCATGGGGCAAGAACAGCACCAAGTGGCAGAAGCACTCCTTGGTGCGCCGG TCGTGCAAGCCGAGCAAGGTGAGCGACGGCACCTTCTGGATAGAGTGGATGGACGCGGTG CAGTTCTTCGAGGGTGGCGGGGTCTGCATGGTGAAGAAGGCCTGGTACCAGTATCGCTTC CCTGGCCAGTTTTTTGGTATCATCCCGTCCGTGGTGCTCAAGATCGAGCTCAAAAAGCAG CAGAAGATGCTCTTTACCCTGTCACAGAAGGACTGCCGCCTGCGGAGCCCCGACGACCCG GATCAGCTGTACAAGGGGCTGCTTATCTCCGTCACGGGGCACAACGCGGAGAAGGGCATG CAGCAGATTGTGGCCCTCAGCACCGATAACCCCGAGGTGCATCCACCAGAGAAATACGAG TACATGCTTGCCCGTGACGTTGGCCTCGAACTCGAGCTCGACCCCGCACAAGGGCCGTTC TACGTCATTCCGCGCATCATGGCGACGAACCAAAACGACCCGATGGACTTCACGCTGGGC ATGCTGACACCCCGCAAGTCAACTGCGAGGGGCCTGCGGGTGTCCTGTGTGCACCTGCCC GACACGTGCCCGACGTTCCGGAACGTGGTATCTTTCCATATGAACGGGGAGGTGGCGACA CATGTGCAGTTTCAGTACAAGAAGCGCGGCGGTGCGCCCCGCGTAAAGGCCGGCATCACC GTCTTTGAGGCCACCAACGTGAAGCCAGCGTACCCCTTCCCCTAA
  • Download Fasta

  • Fasta :-

    MALCGGSCTTSNAEKHYHQKKVHDFNYGGPAVKGECYPLFEDGRCYRVEVDRHKWFLYND SLDMEMHVTFTFQKTTAVYKAQHGRTTVRKTPKGGTQCSVVVYPLETLPYVKFAKKTQIS YSAACMSRDLAPGYIEKVNREAKAKCVNETQKVAGVAGVSRNEEEILYKCRKSKIPYIDM HFHPSEAALRRPHDKQSVANMHAITWKRPQDYIPVIAHKEIKLFRHDVSAAGIGQGHLGD CWLMCSIAVVAESKTMVKDIFRHPVSQSKQKKEERAGGYRVCINKNGWFHNVIVDSYLPT YNGVLYFARSAGDPYELWVPLLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTW KAAANREEVASQFFKDLLRYRKNGYLISISTPDTHTSVYNAGSGNANEAVLEARYKAAGL STGHSYSVLKVRQFVIPRVRLLKIRNPWGSGDEWTGAWGKNSTKWQKHSLVRRSCKPSKV SDGTFWIEWMDAVQFFEGGGVCMVKKAWYQYRFPGQFFGIIPSVVLKIELKKQQKMLFTL SQKDCRLRSPDDPDQLYKGLLISVTGHNAEKGMQQIVALSTDNPEVHPPEKYEYMLARDV GLELELDPAQGPFYVIPRIMATNQNDPMDFTLGMLTPRKSTARGLRVSCVHLPDTCPTFR NVVSFHMNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKPAYPFP

    No Results
  • title: catalytic site
  • coordinates: C241,H424,N446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.0460541 SLFTLSQKDC0.994unspLmjF.31.0460541 SLFTLSQKDC0.994unspLmjF.31.0460541 SLFTLSQKDC0.994unspLmjF.31.0460549 SCRLRSPDDP0.998unspLmjF.31.046087 THGRTTVRKT0.996unspLmjF.31.0460474 SLVRRSCKPS0.997unsp

LmjF.31.0460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India