LmjF.31.1810 | acetylornithine deacetylase-like protein

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_IDPredictionOTHERSPmTPCS_Position
LmjF.31.1810OTHER0.9909380.0064460.002616
No Results

  • Fasta :-

    >LmjF.31.1810 MAYLLTQLKEKGPKGAGCLIGAPADMRVVTSNKGFCEWHVEMQGKVIHSAMALMSTSCNA IEYAAQIIAEMCETALDITKSTAQERNYSCSLACISTDAVVGGSAVNTVPAECDVVCSVR RPLGYL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/892 Sequence name : 892 Sequence length : 126 VALUES OF COMPUTED PARAMETERS Coef20 : 3.340 CoefTot : -1.338 ChDiff : -2 ZoneTo : 24 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.406 0.338 0.454 MesoH : -0.227 0.476 -0.178 0.216 MuHd_075 : 16.151 7.124 4.581 2.371 MuHd_095 : 27.657 23.259 7.377 7.136 MuHd_100 : 26.080 21.712 7.377 6.076 MuHd_105 : 23.640 20.311 7.432 5.212 Hmax_075 : 8.000 8.983 2.535 3.830 Hmax_095 : 15.662 18.113 3.544 6.458 Hmax_100 : 15.400 16.200 3.079 5.980 Hmax_105 : 14.000 14.900 4.262 5.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9690 0.0310 DFMC : 0.9838 0.0162
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 126 LmjF.31.1810 MAYLLTQLKEKGPKGAGCLIGAPADMRVVTSNKGFCEWHVEMQGKVIHSAMALMSTSCNAIEYAAQIIAEMCETALDITK 80 STAQERNYSCSLACISTDAVVGGSAVNTVPAECDVVCSVRRPLGYL 160 ................................................................................ 80 .............................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.1810 9 YLLTQLK|EK 0.066 . LmjF.31.1810 11 LTQLKEK|GP 0.067 . LmjF.31.1810 14 LKEKGPK|GA 0.088 . LmjF.31.1810 27 GAPADMR|VV 0.087 . LmjF.31.1810 33 RVVTSNK|GF 0.063 . LmjF.31.1810 45 HVEMQGK|VI 0.077 . LmjF.31.1810 80 TALDITK|ST 0.085 . LmjF.31.1810 86 KSTAQER|NY 0.117 . LmjF.31.1810 120 DVVCSVR|RP 0.070 . LmjF.31.1810 121 VVCSVRR|PL 0.146 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.1810 ATGGCGTATCTGCTTACGCAGCTGAAGGAGAAGGGCCCCAAGGGGGCCGGCTGCCTCATC GGTGCGCCGGCGGACATGAGGGTGGTGACCAGCAACAAGGGCTTCTGTGAGTGGCACGTG GAGATGCAGGGCAAGGTGATTCACTCCGCCATGGCGCTCATGAGCACGAGCTGCAACGCC ATCGAGTACGCCGCGCAGATCATCGCGGAAATGTGCGAGACCGCGCTGGACATCACGAAA AGCACCGCACAGGAGAGGAACTACAGCTGCTCGCTCGCGTGCATCTCCACGGATGCCGTC GTGGGTGGTAGCGCGGTGAACACGGTACCGGCGGAATGTGACGTTGTGTGCAGCGTGCGC CGTCCGCTTGGGTATCTCTGA
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  • Fasta :-

    MAYLLTQLKEKGPKGAGCLIGAPADMRVVTSNKGFCEWHVEMQGKVIHSAMALMSTSCNA IEYAAQIIAEMCETALDITKSTAQERNYSCSLACISTDAVVGGSAVNTVPAECDVVCSVR RPLGYL

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LmjF.31.1810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India