LmjF.31.3090 | metallo-peptidase, Clan ME, Family M16

_IDPredictionOTHERSPmTPCS_Position
LmjF.31.3090OTHER0.9893610.0007890.009849
No Results

  • Fasta :-

    >LmjF.31.3090 MASAAQHIITPAVIRAKYSGYVLSNGVKCVIVQDANAKMPAAAMSIRAGQLNDPVDLPGL AHFCEHMLFMGTEKFPKEDEFDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLKGALERFV EFFASPSFSPGAMAREVNAVHSEDEKNHNNDYWRLDELIRDFCNPKHPRSRYGNGNLTTL RDKPQRRGIDVREALKTFHSRYYLADGATIAVVSMRPADEVLSLIEGPLTRMKKGAVPRF SFLEAGEHLFTSAALGSWTNVRTVQKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECN TSVLGVLKKRNWATGMLAGSYRVDDDFEVLEASVTLTVEGFRNVLKVVDLLYQGIGQSIA HDVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANVTDLEHCWIGGNVVLEDDMEA ALAYVRQLTPQNCVMVMQWGDMPSDAPAGATSAEENPVECHAKQHDEEDDEDSQSAEEET AEETEQAEESDASAEELFLSLPAFAQVRVSSVSRFHRALYQTVKIPEEYEARWQSLISGP YPPELALPSTNPFIATDFTIHPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVL SPVASASPLNRLYTRVMHGILSNAITETAYYAMLASLTNAVILSETGLGFAVEGPSQKLY EFFFAVVRKGLSTQVLQGTAEEYATYLETGVQKLKNVGMSQPYKVLHETQKKATRHTYYL FNEMVACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGPLEDLLATLT IPIPLKESIPRVRDTYGPRTEDGKANESVLCTFDVLSMPPSNPADPNAAVLVDVIIGEAT PRVMALTDTAMKLISSSFFNVLRTREALGYVVFAESSVVYCTAHALFVVQSALKDVDCVY LLSRIVAFFSAVEAQLDTLCSAEEVEKVKGGLIAALEKVPDSVEGDVRRLEGEYFSLSKF ESRQRTIAALLAITSEDVKSHLRKFFFNNRSGSRALALCINNARTAATDVLAEPGSRRVP LPRARSRPEDSDDAPGDASEDTEPLTLPTFSDGGSCAEITSYASALEYQHGRCVVKCNAY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/662 Sequence name : 662 Sequence length : 1080 VALUES OF COMPUTED PARAMETERS Coef20 : 4.176 CoefTot : -0.740 ChDiff : -43 ZoneTo : 52 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.747 0.186 0.567 MesoH : 0.076 0.949 -0.155 0.321 MuHd_075 : 27.163 25.817 7.922 7.020 MuHd_095 : 27.888 20.881 8.489 6.165 MuHd_100 : 23.796 17.125 7.261 4.833 MuHd_105 : 29.384 21.988 8.669 6.816 Hmax_075 : 8.800 24.400 4.592 5.640 Hmax_095 : 15.300 19.700 3.798 6.100 Hmax_100 : 14.300 18.100 3.344 5.620 Hmax_105 : 13.200 15.300 4.179 5.075 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5582 0.4418 DFMC : 0.4457 0.5543 This protein is probably imported in mitochondria. f(Ser) = 0.0769 f(Arg) = 0.0385 CMi = 0.62112 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1080 LmjF.31.3090 MASAAQHIITPAVIRAKYSGYVLSNGVKCVIVQDANAKMPAAAMSIRAGQLNDPVDLPGLAHFCEHMLFMGTEKFPKEDE 80 FDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLKGALERFVEFFASPSFSPGAMAREVNAVHSEDEKNHNNDYWRLDELIR 160 DFCNPKHPRSRYGNGNLTTLRDKPQRRGIDVREALKTFHSRYYLADGATIAVVSMRPADEVLSLIEGPLTRMKKGAVPRF 240 SFLEAGEHLFTSAALGSWTNVRTVQKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECNTSVLGVLKKRNWATGMLAGS 320 YRVDDDFEVLEASVTLTVEGFRNVLKVVDLLYQGIGQSIAHDVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANV 400 TDLEHCWIGGNVVLEDDMEAALAYVRQLTPQNCVMVMQWGDMPSDAPAGATSAEENPVECHAKQHDEEDDEDSQSAEEET 480 AEETEQAEESDASAEELFLSLPAFAQVRVSSVSRFHRALYQTVKIPEEYEARWQSLISGPYPPELALPSTNPFIATDFTI 560 HPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVLSPVASASPLNRLYTRVMHGILSNAITETAYYAMLASLTNA 640 VILSETGLGFAVEGPSQKLYEFFFAVVRKGLSTQVLQGTAEEYATYLETGVQKLKNVGMSQPYKVLHETQKKATRHTYYL 720 FNEMVACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGPLEDLLATLTIPIPLKESIPRVRDTYGPRT 800 EDGKANESVLCTFDVLSMPPSNPADPNAAVLVDVIIGEATPRVMALTDTAMKLISSSFFNVLRTREALGYVVFAESSVVY 880 CTAHALFVVQSALKDVDCVYLLSRIVAFFSAVEAQLDTLCSAEEVEKVKGGLIAALEKVPDSVEGDVRRLEGEYFSLSKF 960 ESRQRTIAALLAITSEDVKSHLRKFFFNNRSGSRALALCINNARTAATDVLAEPGSRRVPLPRARSRPEDSDDAPGDASE 1040 DTEPLTLPTFSDGGSCAEITSYASALEYQHGRCVVKCNAY 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ........................................ 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.31.3090 15 ITPAVIR|AK 0.085 . LmjF.31.3090 17 PAVIRAK|YS 0.087 . LmjF.31.3090 28 VLSNGVK|CV 0.079 . LmjF.31.3090 38 VQDANAK|MP 0.063 . LmjF.31.3090 47 AAAMSIR|AG 0.082 . LmjF.31.3090 74 LFMGTEK|FP 0.065 . LmjF.31.3090 77 GTEKFPK|ED 0.060 . LmjF.31.3090 87 FDSFVSK|AS 0.075 . LmjF.31.3090 113 VSDGSLK|GA 0.063 . LmjF.31.3090 118 LKGALER|FV 0.122 . LmjF.31.3090 135 SPGAMAR|EV 0.222 . LmjF.31.3090 146 VHSEDEK|NH 0.057 . LmjF.31.3090 154 HNNDYWR|LD 0.100 . LmjF.31.3090 160 RLDELIR|DF 0.080 . LmjF.31.3090 166 RDFCNPK|HP 0.060 . LmjF.31.3090 169 CNPKHPR|SR 0.146 . LmjF.31.3090 171 PKHPRSR|YG 0.129 . LmjF.31.3090 181 GNLTTLR|DK 0.083 . LmjF.31.3090 183 LTTLRDK|PQ 0.061 . LmjF.31.3090 186 LRDKPQR|RG 0.106 . LmjF.31.3090 187 RDKPQRR|GI 0.234 . LmjF.31.3090 192 RRGIDVR|EA 0.143 . LmjF.31.3090 196 DVREALK|TF 0.053 . LmjF.31.3090 201 LKTFHSR|YY 0.113 . LmjF.31.3090 216 IAVVSMR|PA 0.165 . LmjF.31.3090 231 IEGPLTR|MK 0.094 . LmjF.31.3090 233 GPLTRMK|KG 0.058 . LmjF.31.3090 234 PLTRMKK|GA 0.307 . LmjF.31.3090 239 KKGAVPR|FS 0.121 . LmjF.31.3090 262 GSWTNVR|TV 0.124 . LmjF.31.3090 266 NVRTVQK|MR 0.066 . LmjF.31.3090 268 RTVQKMR|EL 0.085 . LmjF.31.3090 271 QKMRELR|LM 0.250 . LmjF.31.3090 277 RLMWAVR|SP 0.157 . LmjF.31.3090 284 SPSSAWR|TT 0.111 . LmjF.31.3090 308 SVLGVLK|KR 0.063 . LmjF.31.3090 309 VLGVLKK|RN 0.095 . LmjF.31.3090 310 LGVLKKR|NW 0.194 . LmjF.31.3090 322 MLAGSYR|VD 0.127 . LmjF.31.3090 342 LTVEGFR|NV 0.096 . LmjF.31.3090 346 GFRNVLK|VV 0.076 . LmjF.31.3090 369 VDAEVYK|GM 0.086 . LmjF.31.3090 372 EVYKGMK|AE 0.059 . LmjF.31.3090 376 GMKAEER|LF 0.093 . LmjF.31.3090 426 AALAYVR|QL 0.083 . LmjF.31.3090 463 PVECHAK|QH 0.074 . LmjF.31.3090 508 PAFAQVR|VS 0.092 . LmjF.31.3090 514 RVSSVSR|FH 0.117 . LmjF.31.3090 517 SVSRFHR|AL 0.464 . LmjF.31.3090 524 ALYQTVK|IP 0.067 . LmjF.31.3090 532 PEEYEAR|WQ 0.079 . LmjF.31.3090 582 HAVTYVR|RD 0.079 . LmjF.31.3090 583 AVTYVRR|DA 0.279 . LmjF.31.3090 592 GHHSTFK|MA 0.067 . LmjF.31.3090 596 TFKMALR|CN 0.079 . LmjF.31.3090 611 SASPLNR|LY 0.133 . LmjF.31.3090 615 LNRLYTR|VM 0.101 . LmjF.31.3090 658 VEGPSQK|LY 0.061 . LmjF.31.3090 668 FFFAVVR|KG 0.062 . LmjF.31.3090 669 FFAVVRK|GL 0.159 . LmjF.31.3090 693 LETGVQK|LK 0.065 . LmjF.31.3090 695 TGVQKLK|NV 0.096 . LmjF.31.3090 704 GMSQPYK|VL 0.073 . LmjF.31.3090 711 VLHETQK|KA 0.071 . LmjF.31.3090 712 LHETQKK|AT 0.098 . LmjF.31.3090 715 TQKKATR|HT 0.105 . LmjF.31.3090 741 GYCTFVK|QY 0.059 . LmjF.31.3090 765 LSTQDVR|EM 0.069 . LmjF.31.3090 786 TIPIPLK|ES 0.060 . LmjF.31.3090 791 LKESIPR|VR 0.095 . LmjF.31.3090 793 ESIPRVR|DT 0.108 . LmjF.31.3090 799 RDTYGPR|TE 0.080 . LmjF.31.3090 804 PRTEDGK|AN 0.079 . LmjF.31.3090 842 IGEATPR|VM 0.070 . LmjF.31.3090 852 LTDTAMK|LI 0.066 . LmjF.31.3090 863 SFFNVLR|TR 0.087 . LmjF.31.3090 865 FNVLRTR|EA 0.085 . LmjF.31.3090 894 VVQSALK|DV 0.077 . LmjF.31.3090 904 CVYLLSR|IV 0.079 . LmjF.31.3090 927 SAEEVEK|VK 0.065 . LmjF.31.3090 929 EEVEKVK|GG 0.061 . LmjF.31.3090 938 LIAALEK|VP 0.064 . LmjF.31.3090 948 SVEGDVR|RL 0.092 . LmjF.31.3090 949 VEGDVRR|LE 0.142 . LmjF.31.3090 959 EYFSLSK|FE 0.065 . LmjF.31.3090 963 LSKFESR|QR 0.083 . LmjF.31.3090 965 KFESRQR|TI 0.085 . LmjF.31.3090 979 ITSEDVK|SH 0.069 . LmjF.31.3090 983 DVKSHLR|KF 0.072 . LmjF.31.3090 984 VKSHLRK|FF 0.143 . LmjF.31.3090 990 KFFFNNR|SG 0.113 . LmjF.31.3090 994 NNRSGSR|AL 0.081 . LmjF.31.3090 1004 LCINNAR|TA 0.088 . LmjF.31.3090 1017 LAEPGSR|RV 0.069 . LmjF.31.3090 1018 AEPGSRR|VP 0.085 . LmjF.31.3090 1023 RRVPLPR|AR 0.127 . LmjF.31.3090 1025 VPLPRAR|SR 0.092 . LmjF.31.3090 1027 LPRARSR|PE 0.088 . LmjF.31.3090 1072 LEYQHGR|CV 0.123 . LmjF.31.3090 1076 HGRCVVK|CN 0.068 . ____________________________^_________________

  • Fasta :-

    >LmjF.31.3090 ATGGCAAGCGCCGCCCAGCACATAATCACACCAGCGGTAATCCGCGCGAAGTACTCTGGC TATGTCCTGAGCAACGGCGTCAAGTGCGTCATTGTGCAGGATGCGAACGCGAAAATGCCG GCGGCGGCCATGAGCATCCGTGCAGGCCAGCTGAACGACCCTGTGGATCTGCCTGGACTG GCGCACTTCTGCGAGCACATGCTCTTTATGGGAACCGAGAAGTTCCCCAAGGAGGACGAG TTCGACAGTTTTGTGTCCAAAGCGAGCGGCCTCACCAACGCCTTCACAGAAGGTTGCGAT ACGGTGTACTACTTCAGCGTCAGCGATGGCAGCCTCAAGGGGGCGCTAGAGCGGTTTGTG GAGTTCTTCGCGTCTCCCAGCTTCAGTCCTGGTGCGATGGCCCGGGAGGTGAACGCGGTG CACAGCGAAGACGAGAAGAACCACAATAACGACTACTGGCGTCTCGACGAGCTGATCCGT GACTTCTGCAACCCTAAGCACCCACGCAGCCGCTACGGCAATGGCAATCTCACCACCCTG CGGGACAAGCCGCAGCGGCGGGGAATCGACGTGCGCGAGGCGCTCAAAACGTTCCACTCC CGCTACTACTTGGCGGATGGGGCGACAATTGCGGTGGTGAGCATGCGACCAGCCGACGAG GTGCTGAGCCTCATCGAGGGACCGCTCACGCGGATGAAGAAGGGGGCCGTTCCACGCTTT TCCTTCCTCGAGGCCGGCGAGCATCTGTTTACCAGTGCCGCGCTCGGCTCCTGGACCAAT GTGCGCACGGTGCAGAAGATGCGTGAGCTGCGGCTGATGTGGGCGGTGCGGTCACCGTCG TCGGCGTGGCGCACAACGCCGTCGGCGTACATTGCCCACCTCCTCGGGCATGAGTGCAAC ACCTCCGTGCTCGGGGTGCTGAAGAAGCGCAACTGGGCGACAGGCATGCTGGCCGGCTCC TACCGCGTGGACGATGACTTTGAAGTCCTGGAAGCCTCTGTCACACTCACAGTGGAGGGG TTCCGGAACGTGCTGAAGGTGGTGGACCTGCTGTACCAGGGCATTGGCCAGTCCATTGCG CATGACGTGGACGCTGAGGTGTACAAGGGGATGAAGGCGGAGGAGCGTCTCTTCTTTGAG AGCGTTGACGCTGGCGCGCCGGCGAATCACTGCGTCACGCTTGCGCAGAACGCCAACGTC ACCGATCTGGAGCACTGCTGGATCGGCGGGAACGTGGTGCTCGAGGACGATATGGAGGCG GCTCTGGCCTATGTGCGCCAGCTGACACCGCAGAACTGCGTGATGGTCATGCAGTGGGGA GATATGCCGAGCGATGCACCCGCCGGCGCCACGTCAGCGGAGGAAAACCCCGTAGAGTGC CATGCAAAGCAGCACGACGAAGAGGATGACGAGGACAGCCAGAGTGCCGAGGAGGAGACC GCAGAGGAGACGGAGCAAGCGGAGGAGAGTGACGCGTCGGCTGAGGAGCTGTTTCTCTCG CTGCCGGCCTTCGCCCAGGTGCGGGTCAGCAGCGTCTCGCGCTTCCACAGGGCGCTGTAC CAGACGGTCAAGATACCGGAGGAGTACGAGGCGCGGTGGCAGAGTCTCATCAGCGGGCCG TATCCGCCGGAGCTGGCGTTGCCGTCCACGAATCCGTTCATTGCCACAGACTTCACAATT CACCCGCCGGCCGCTGCGGAGGCGGTGGACGAGATCGCCTCCCCGCACGCTGTGACATAC GTGAGGAGGGATGCGGGGCACCACAGTACCTTCAAGATGGCGCTGCGGTGCAACGTTCTC TCACCCGTTGCGTCCGCGAGCCCGCTGAACCGGCTGTACACGCGCGTCATGCACGGCATA CTGTCCAACGCAATCACGGAGACGGCCTACTACGCGATGTTAGCGTCGCTCACTAACGCG GTGATCTTGTCGGAAACGGGGCTGGGCTTTGCAGTGGAGGGCCCGTCGCAGAAGCTGTAC GAGTTTTTCTTCGCCGTAGTGCGCAAGGGGCTGTCCACGCAGGTGCTCCAGGGTACTGCG GAGGAGTACGCGACGTACCTGGAGACAGGCGTGCAGAAGCTCAAGAACGTGGGGATGAGC CAGCCGTACAAAGTTCTCCACGAGACACAGAAGAAGGCGACGCGGCACACGTACTACTTG TTCAACGAGATGGTTGCGTGCGAGTCTGCCGCCACGTACGAGGGCTACTGCACCTTTGTG AAGCAGTACTTGGAGAGTGGTCTCCTGCTCGAGTGCTTTGTTGCGGGGAACGTGCTCTCC ACACAGGATGTGCGCGAAATGCTGGTTGGTCCGCTGGAGGACCTCCTAGCAACCTTAACC ATTCCAATCCCGCTGAAGGAGTCCATTCCACGTGTGCGCGACACATACGGCCCGCGTACT GAAGATGGGAAAGCAAACGAGAGCGTGCTCTGCACCTTTGATGTCCTCTCGATGCCACCA TCGAACCCGGCCGACCCGAACGCGGCTGTTCTTGTCGACGTCATCATTGGCGAGGCCACT CCGCGTGTGATGGCGCTCACAGACACCGCCATGAAGCTCATTAGCTCCTCTTTCTTCAAC GTGCTGCGCACGCGGGAGGCGTTGGGCTACGTTGTGTTTGCTGAAAGCAGTGTCGTCTAC TGCACAGCGCACGCACTCTTCGTGGTGCAGAGTGCACTGAAGGATGTAGACTGCGTATAC CTGCTCTCCCGTATCGTCGCCTTCTTCTCTGCTGTGGAGGCGCAGCTGGACACGCTGTGC TCCGCCGAGGAGGTCGAGAAGGTGAAGGGGGGCCTGATCGCAGCTCTGGAGAAAGTGCCA GACTCTGTCGAGGGCGATGTCAGGCGCCTTGAGGGTGAGTATTTCAGCCTGTCGAAGTTT GAAAGTCGGCAGCGGACGATTGCCGCTCTCTTGGCCATCACTTCGGAGGATGTAAAGTCG CACCTCCGCAAGTTTTTCTTCAACAACCGCAGTGGGTCTCGTGCGTTGGCGCTGTGCATC AATAACGCTCGCACCGCTGCCACCGATGTGCTCGCTGAGCCAGGTAGCCGCCGCGTTCCT CTGCCGCGCGCGCGGTCGAGGCCGGAGGACAGCGACGACGCGCCAGGTGACGCGTCAGAG GACACTGAGCCGCTGACGCTGCCTACCTTTTCGGATGGCGGCAGCTGTGCTGAGATCACC TCTTATGCTTCTGCCCTCGAGTATCAGCACGGGCGTTGCGTTGTCAAGTGCAACGCCTAT TGA
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  • Fasta :-

    MASAAQHIITPAVIRAKYSGYVLSNGVKCVIVQDANAKMPAAAMSIRAGQLNDPVDLPGL AHFCEHMLFMGTEKFPKEDEFDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLKGALERFV EFFASPSFSPGAMAREVNAVHSEDEKNHNNDYWRLDELIRDFCNPKHPRSRYGNGNLTTL RDKPQRRGIDVREALKTFHSRYYLADGATIAVVSMRPADEVLSLIEGPLTRMKKGAVPRF SFLEAGEHLFTSAALGSWTNVRTVQKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECN TSVLGVLKKRNWATGMLAGSYRVDDDFEVLEASVTLTVEGFRNVLKVVDLLYQGIGQSIA HDVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANVTDLEHCWIGGNVVLEDDMEA ALAYVRQLTPQNCVMVMQWGDMPSDAPAGATSAEENPVECHAKQHDEEDDEDSQSAEEET AEETEQAEESDASAEELFLSLPAFAQVRVSSVSRFHRALYQTVKIPEEYEARWQSLISGP YPPELALPSTNPFIATDFTIHPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVL SPVASASPLNRLYTRVMHGILSNAITETAYYAMLASLTNAVILSETGLGFAVEGPSQKLY EFFFAVVRKGLSTQVLQGTAEEYATYLETGVQKLKNVGMSQPYKVLHETQKKATRHTYYL FNEMVACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGPLEDLLATLT IPIPLKESIPRVRDTYGPRTEDGKANESVLCTFDVLSMPPSNPADPNAAVLVDVIIGEAT PRVMALTDTAMKLISSSFFNVLRTREALGYVVFAESSVVYCTAHALFVVQSALKDVDCVY LLSRIVAFFSAVEAQLDTLCSAEEVEKVKGGLIAALEKVPDSVEGDVRRLEGEYFSLSKF ESRQRTIAALLAITSEDVKSHLRKFFFNNRSGSRALALCINNARTAATDVLAEPGSRRVP LPRARSRPEDSDDAPGDASEDTEPLTLPTFSDGGSCAEITSYASALEYQHGRCVVKCNAY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.31.3090475 SEDSQSAEEE0.996unspLmjF.31.3090475 SEDSQSAEEE0.996unspLmjF.31.3090475 SEDSQSAEEE0.996unspLmjF.31.3090493 SESDASAEEL0.996unspLmjF.31.3090942 SKVPDSVEGD0.996unspLmjF.31.30901026 SPRARSRPED0.99unspLmjF.31.3090106 SVYYFSVSDG0.991unspLmjF.31.3090452 SAGATSAEEN0.996unsp

LmjF.31.3090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India