LmjF.32.1330 | PPPDE putative peptidase domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.32.1330OTHER0.9999730.0000220.000005
No Results

  • Fasta :-

    >LmjF.32.1330 MTHTTEVASPKSDPALYEKMQHADPLPPSESVLLPSKTVPTPLRKSDESRLHLSVDKGAS KEKVVEEEMGPPLRFTTTEVPLRTGVMTPRSSRHLSVSCVPVEATTCANRPLATVPRKPC LRRAAALRPPNDASVPGAAVRDGQSFLLDRCKPTARDMVVELHVYDLSHGHLKRYAQELV GLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGNKYRTHYLGVTKKPVSEFFRWIGV RAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESASIPMYLFSTVDNLVKTEVGASVAEVM TLTTHGMQSSVARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKRL VLDLSPYVKGLIKRKHMKPAALTVLEGMACALMEGTDSLPPNLLLNYVEIVTESLLRSPL ATWGPIFNGLRVAVLHKLCLINCVFHTKLMSMLVLAARDFPRLLPDGRVAFLRLACNFAC GAYGVIVYSEARYRDAWVSIVGLGLMDSSSTVVYTAACLALNLALGIVATSNLPLRRDMT QQADEHYALRLATLLLYNLRHRSALQLPEPSFNMILMALYRLSSSNTTALEYVVSHPFKP QYAELLDRCGSNESRALVCLLKTLEDLFG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/517 Sequence name : 517 Sequence length : 629 VALUES OF COMPUTED PARAMETERS Coef20 : 3.395 CoefTot : -0.239 ChDiff : 13 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 2.124 0.365 0.693 MesoH : 0.260 0.959 -0.046 0.360 MuHd_075 : 9.635 9.162 2.460 1.586 MuHd_095 : 26.439 17.095 7.857 3.007 MuHd_100 : 23.300 14.531 6.803 2.257 MuHd_105 : 14.033 8.014 3.923 0.810 Hmax_075 : 7.467 3.800 -0.818 2.450 Hmax_095 : 12.400 7.100 1.008 2.700 Hmax_100 : 12.400 7.100 1.008 2.700 Hmax_105 : 10.200 4.400 0.753 1.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9868 0.0132 DFMC : 0.9834 0.0166
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 629 LmjF.32.1330 MTHTTEVASPKSDPALYEKMQHADPLPPSESVLLPSKTVPTPLRKSDESRLHLSVDKGASKEKVVEEEMGPPLRFTTTEV 80 PLRTGVMTPRSSRHLSVSCVPVEATTCANRPLATVPRKPCLRRAAALRPPNDASVPGAAVRDGQSFLLDRCKPTARDMVV 160 ELHVYDLSHGHLKRYAQELVGLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGNKYRTHYLGVTKKPVSEFFRWIGV 240 RAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESASIPMYLFSTVDNLVKTEVGASVAEVMTLTTHGMQSSVARQMRSRTL 320 ERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKRLVLDLSPYVKGLIKRKHMKPAALTVLEGMACALMEGTDSLP 400 PNLLLNYVEIVTESLLRSPLATWGPIFNGLRVAVLHKLCLINCVFHTKLMSMLVLAARDFPRLLPDGRVAFLRLACNFAC 480 GAYGVIVYSEARYRDAWVSIVGLGLMDSSSTVVYTAACLALNLALGIVATSNLPLRRDMTQQADEHYALRLATLLLYNLR 560 HRSALQLPEPSFNMILMALYRLSSSNTTALEYVVSHPFKPQYAELLDRCGSNESRALVCLLKTLEDLFG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.32.1330 11 TEVASPK|SD 0.083 . LmjF.32.1330 19 DPALYEK|MQ 0.062 . LmjF.32.1330 37 SVLLPSK|TV 0.062 . LmjF.32.1330 44 TVPTPLR|KS 0.093 . LmjF.32.1330 45 VPTPLRK|SD 0.105 . LmjF.32.1330 50 RKSDESR|LH 0.099 . LmjF.32.1330 57 LHLSVDK|GA 0.076 . LmjF.32.1330 61 VDKGASK|EK 0.062 . LmjF.32.1330 63 KGASKEK|VV 0.090 . LmjF.32.1330 74 EMGPPLR|FT 0.106 . LmjF.32.1330 83 TTEVPLR|TG 0.072 . LmjF.32.1330 90 TGVMTPR|SS 0.122 . LmjF.32.1330 93 MTPRSSR|HL 0.274 . LmjF.32.1330 110 ATTCANR|PL 0.080 . LmjF.32.1330 117 PLATVPR|KP 0.083 . LmjF.32.1330 118 LATVPRK|PC 0.069 . LmjF.32.1330 122 PRKPCLR|RA 0.093 . LmjF.32.1330 123 RKPCLRR|AA 0.133 . LmjF.32.1330 128 RRAAALR|PP 0.093 . LmjF.32.1330 141 VPGAAVR|DG 0.093 . LmjF.32.1330 150 QSFLLDR|CK 0.097 . LmjF.32.1330 152 FLLDRCK|PT 0.062 . LmjF.32.1330 156 RCKPTAR|DM 0.119 . LmjF.32.1330 173 LSHGHLK|RY 0.075 . LmjF.32.1330 174 SHGHLKR|YA 0.276 . LmjF.32.1330 212 GIAAAGR|TR 0.075 . LmjF.32.1330 214 AAAGRTR|FG 0.102 . LmjF.32.1330 218 RTRFGNK|YR 0.075 . LmjF.32.1330 220 RFGNKYR|TH 0.094 . LmjF.32.1330 228 HYLGVTK|KP 0.055 . LmjF.32.1330 229 YLGVTKK|PV 0.200 . LmjF.32.1330 236 PVSEFFR|WI 0.136 . LmjF.32.1330 241 FRWIGVR|AI 0.118 . LmjF.32.1330 255 HDYHPVR|HN 0.115 . LmjF.32.1330 267 FSHEAAR|FL 0.141 . LmjF.32.1330 289 TVDNLVK|TE 0.055 . LmjF.32.1330 313 MQSSVAR|QM 0.111 . LmjF.32.1330 316 SVARQMR|SR 0.454 . LmjF.32.1330 318 ARQMRSR|TL 0.120 . LmjF.32.1330 322 RSRTLER|QC 0.100 . LmjF.32.1330 350 TAAVLFR|PS 0.117 . LmjF.32.1330 358 SDLHLAK|RL 0.059 . LmjF.32.1330 359 DLHLAKR|LV 0.192 . LmjF.32.1330 369 DLSPYVK|GL 0.075 . LmjF.32.1330 373 YVKGLIK|RK 0.056 . LmjF.32.1330 374 VKGLIKR|KH 0.140 . LmjF.32.1330 375 KGLIKRK|HM 0.086 . LmjF.32.1330 378 IKRKHMK|PA 0.078 . LmjF.32.1330 417 VTESLLR|SP 0.076 . LmjF.32.1330 431 PIFNGLR|VA 0.066 . LmjF.32.1330 437 RVAVLHK|LC 0.055 . LmjF.32.1330 448 NCVFHTK|LM 0.063 . LmjF.32.1330 458 MLVLAAR|DF 0.102 . LmjF.32.1330 462 AARDFPR|LL 0.125 . LmjF.32.1330 468 RLLPDGR|VA 0.077 . LmjF.32.1330 473 GRVAFLR|LA 0.113 . LmjF.32.1330 492 IVYSEAR|YR 0.092 . LmjF.32.1330 494 YSEARYR|DA 0.149 . LmjF.32.1330 536 TSNLPLR|RD 0.114 . LmjF.32.1330 537 SNLPLRR|DM 0.212 . LmjF.32.1330 550 DEHYALR|LA 0.082 . LmjF.32.1330 560 LLLYNLR|HR 0.077 . LmjF.32.1330 562 LYNLRHR|SA 0.130 . LmjF.32.1330 581 ILMALYR|LS 0.090 . LmjF.32.1330 599 VVSHPFK|PQ 0.078 . LmjF.32.1330 608 YAELLDR|CG 0.078 . LmjF.32.1330 615 CGSNESR|AL 0.102 . LmjF.32.1330 622 ALVCLLK|TL 0.066 . ____________________________^_________________

  • Fasta :-

    >LmjF.32.1330 ATGACGCACACGACGGAGGTCGCGAGCCCCAAGTCGGATCCAGCCCTTTACGAGAAGATG CAGCACGCAGACCCGCTGCCGCCGTCGGAGAGTGTGCTTCTGCCCTCCAAGACGGTCCCC ACCCCACTGCGCAAGTCAGACGAAAGCCGGCTGCACCTTTCTGTCGACAAGGGCGCCTCA AAGGAAAAAGTAGTGGAGGAGGAAATGGGGCCGCCTCTGCGGTTTACGACGACAGAGGTG CCGTTGCGCACTGGCGTCATGACGCCGCGGTCATCGCGGCATCTCTCGGTTTCCTGCGTC CCTGTAGAGGCGACGACCTGTGCAAATCGACCCCTGGCCACAGTCCCCCGGAAGCCCTGC TTACGCCGAGCAGCGGCGCTGCGTCCACCAAACGACGCGTCAGTTCCCGGGGCAGCCGTG CGCGATGGCCAGAGCTTTTTGCTTGACAGATGCAAACCGACCGCCAGAGACATGGTGGTG GAGCTGCACGTCTACGACCTCTCACATGGGCATCTGAAGCGGTATGCGCAGGAGCTGGTT GGCCTAGAAATTCCCGGCGTCTACCACTCCGGCATTGTATGCTACGGGGTTGAGGTGTAC TTTGAGGGCGGCATCGGCATCGCCGCGGCGGGCCGCACGCGTTTCGGTAACAAGTACCGC ACGCACTACCTCGGCGTGACAAAGAAGCCCGTCTCAGAGTTCTTCCGGTGGATCGGTGTG CGGGCCATTCACGTTAATCAGATCCACGACTACCACCCAGTGCGGCACAACTGCCATCAC TTCTCCCACGAGGCCGCGCGGTTTTTGCTTGGCGAAAGCGCGTCCATTCCAATGTATCTC TTCAGCACCGTGGACAATCTTGTGAAGACGGAGGTTGGTGCTTCCGTTGCGGAGGTCATG ACTCTCACCACCCACGGCATGCAGAGTAGCGTCGCGCGGCAGATGCGCTCCCGCACGTTG GAGCGGCAGTGCAGCATCGATATGCAACTCAGCGCCTCGACAGCCTGCGGTGTTATGACA CTGCCGCCGACGGCAGCAGTGCTCTTTCGTCCCAGCGACCTCCACCTTGCAAAACGACTT GTCCTTGACCTCAGCCCATACGTGAAGGGCCTAATCAAGAGAAAGCACATGAAGCCAGCT GCATTGACAGTGCTGGAGGGGATGGCATGTGCGCTGATGGAGGGCACTGATTCTCTTCCG CCGAATCTGCTGTTGAACTACGTGGAGATAGTCACGGAGTCACTCCTGCGCAGCCCGTTG GCGACGTGGGGGCCTATCTTCAACGGGCTCCGAGTGGCAGTGCTGCATAAGTTGTGCCTC ATCAACTGTGTGTTTCACACGAAACTGATGTCGATGCTGGTGCTCGCGGCGCGCGACTTT CCCCGCTTATTGCCCGACGGGCGCGTGGCGTTCCTTCGGCTGGCGTGCAACTTTGCCTGC GGCGCCTACGGCGTTATCGTCTACAGCGAAGCTCGATACCGTGATGCCTGGGTGTCGATC GTTGGCCTGGGCCTCATGGATAGCAGCAGTACTGTCGTGTACACAGCCGCGTGCCTGGCC TTGAACCTAGCGCTCGGCATTGTCGCCACTTCCAATCTGCCCCTGAGGCGTGACATGACG CAGCAGGCCGACGAACACTACGCGCTGCGACTCGCGACGCTTCTGCTCTACAACCTACGC CACCGCAGCGCACTTCAGCTGCCGGAGCCGTCCTTCAACATGATCTTGATGGCACTCTAC CGGCTTTCCTCCAGCAACACAACGGCGCTGGAGTATGTCGTGTCACACCCGTTCAAGCCA CAGTACGCCGAGCTCCTCGACCGGTGTGGTTCGAATGAAAGCCGGGCCCTGGTGTGCCTC CTCAAAACCCTAGAAGACCTTTTCGGTTGA
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  • Fasta :-

    MTHTTEVASPKSDPALYEKMQHADPLPPSESVLLPSKTVPTPLRKSDESRLHLSVDKGAS KEKVVEEEMGPPLRFTTTEVPLRTGVMTPRSSRHLSVSCVPVEATTCANRPLATVPRKPC LRRAAALRPPNDASVPGAAVRDGQSFLLDRCKPTARDMVVELHVYDLSHGHLKRYAQELV GLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGNKYRTHYLGVTKKPVSEFFRWIGV RAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESASIPMYLFSTVDNLVKTEVGASVAEVM TLTTHGMQSSVARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKRL VLDLSPYVKGLIKRKHMKPAALTVLEGMACALMEGTDSLPPNLLLNYVEIVTESLLRSPL ATWGPIFNGLRVAVLHKLCLINCVFHTKLMSMLVLAARDFPRLLPDGRVAFLRLACNFAC GAYGVIVYSEARYRDAWVSIVGLGLMDSSSTVVYTAACLALNLALGIVATSNLPLRRDMT QQADEHYALRLATLLLYNLRHRSALQLPEPSFNMILMALYRLSSSNTTALEYVVSHPFKP QYAELLDRCGSNESRALVCLLKTLEDLFG

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.32.13309 STEVASPKSD0.997unspLmjF.32.133046 SPLRKSDESR0.996unsp

LmjF.32.1330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India