_IDPredictionOTHERSPmTPCS_Position
LmjF.33.0200OTHER0.9995600.0000080.000433
No Results
  • Fasta :-

    >LmjF.33.0200 MNLRSRSSRQANQRTLSTSVRDRDSGDGVSVQLRSCALQPRPPVSGGRSSSTAKSTKGAP KCSPPAASVPKRSAAKRLALRTRLPYLRSVPPLPASTSGEPTSSSLRFERRSFSSSCVPR EAATVHKPTYTIIPEVLQHVKHLCSSVRDSEKDASLPSGACSGSGARDRRNNRLALPSIS WLSEDATAVVQDIEMVQGMLFSSLQSGSAADAVSPPTPKRDAAGAQLHHTRSHSWNPQRG LTFTPAGSGAFMSKKERRKAWALFLHKNTHAFALIVNACRSSLAVRELQVGSVLLTFLYN VLRHMSGDKQRKAVVLCEKLGVFRVCTSVLQEGKRRLRPGDVDAAFVASLRACEAAALLF TLGSTFNVKLWTLFRLSQSLECTFACASVTFRLLEAEFARYHASLQSDLCQTTTAAALQE YTRKHTRKETLTTLRRFQSRTQWTCTAFSHFCFTLFAFTGNSASAVDLGARGTELCATAI AMSTFFLTQIAPLLLMSVKYDAPEKTRHPDVRSLVSVDAEHWVPSWVMRLMRRVEFMLLW CVVLMQRLTSFDKVSQMTAEVALRFHVPRGIVFYLLPPSRHMLQMPPRRECVHVILLLLN ALLAADRETVLADIKDLGGLKVVVASVLALSEKSSQQWHHFYLQLCSMYGYTMLPSWNGR PACYVDERLPASLRRQFDVAKSPGGKSHLSEPVSSCHSAVDTRADASQACLSSTQASLAQ CVGRSTGTVLDSIISSSLTAARSGRGSLDNFLLLVDIRPDVFSPELRSGDVDPVSELVAF DCSQLPWPFKDAAPPTTAESWYGAPSSVAAAVEDAHLSVPLINVCEEDRVRVLRHHIARL TLLDEATCDGGPTPHVHKVVFERLSSASPGAAGDAPSTVEGSADGVEFFSDYESGNLQRA IEVTDSEYDLVLSWDTATNSYTQWFSFGMRHFTPGKTYRFNILNMEKGDSTFNEGQKPLL LHVPDGGNPSDPSAPRSKWTRAGEGIFYFGNAFLRPARAHYFGKNGETASAPAASPLSTS PRPLSTSVNTCAPVSHLGGRAPPPVIAKKRTPAFPTLSPPPTTPPPFTAATSAESGVVKQ KCYFTVTFSVTMPTTATGTVYLANCFPFTYTEMREHLAWLAREAHTCPTRSLLPQCLCWT PGGLQVPLLTVTALRNRDTGEPYTTDEIRRRPIALLVARVHPGETNASWVMQGLLDTLLC PPAVAAEYASHLCENFVFKVIPMLNADGVIMGNHRCSFAGVDLNRDYTNPKADFNPTLYT MKQLLRYWTGEEKRQVVMFADFHGHSRAKNFLVYGCTMNTIRGIATHSRHKGTRGGDGGR RRRTRKASRTAPAGPEKVMAALLSQLFPSFSLSQSSFAVTKDKKGSARVVLYDEFGVRMS YGFEATMVGGLVCVPELLRVSAGTHDDDAAAPVSAVCKAEVHYSPTVFRAMGDVFLRALS ILFRQWAALTALAVDSGCSDRKSSPSDVLTSTVLQLSWSMTAAAGGDRDPPKNPFSPSSR ESGAVLPRAGQYAAATRGDRRVGSPVRTGASAAPNEPGSGLSVVPVAGQAEALDYLFMAD CREGATSAKDEDDKDEEGSIASASDISTEEDSEDAEMEEDELLTTTSEKHTRRRRSEAQY AGNASEVSEHSASSPVASGSDDQDWSGCNSSGSAAGDSDDSRSSVSSVDEEIPTNLFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/840 Sequence name : 840 Sequence length : 1678 VALUES OF COMPUTED PARAMETERS Coef20 : 5.113 CoefTot : 1.042 ChDiff : 17 ZoneTo : 21 KR : 5 DE : 0 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.971 1.759 0.286 0.654 MesoH : 0.382 0.747 -0.132 0.299 MuHd_075 : 31.198 17.290 7.200 7.644 MuHd_095 : 32.079 14.812 7.401 6.754 MuHd_100 : 26.477 10.781 5.849 5.361 MuHd_105 : 17.474 6.176 3.725 3.522 Hmax_075 : 4.200 5.017 -0.832 1.960 Hmax_095 : -6.500 -0.437 -3.005 -0.761 Hmax_100 : -6.500 -2.400 -3.005 -1.620 Hmax_105 : 1.000 -5.017 -4.812 -0.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0774 0.9226 DFMC : 0.0433 0.9567 This protein is probably imported in mitochondria. f(Ser) = 0.2381 f(Arg) = 0.2381 CMi = 0.59032 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1678 LmjF.33.0200 MNLRSRSSRQANQRTLSTSVRDRDSGDGVSVQLRSCALQPRPPVSGGRSSSTAKSTKGAPKCSPPAASVPKRSAAKRLAL 80 RTRLPYLRSVPPLPASTSGEPTSSSLRFERRSFSSSCVPREAATVHKPTYTIIPEVLQHVKHLCSSVRDSEKDASLPSGA 160 CSGSGARDRRNNRLALPSISWLSEDATAVVQDIEMVQGMLFSSLQSGSAADAVSPPTPKRDAAGAQLHHTRSHSWNPQRG 240 LTFTPAGSGAFMSKKERRKAWALFLHKNTHAFALIVNACRSSLAVRELQVGSVLLTFLYNVLRHMSGDKQRKAVVLCEKL 320 GVFRVCTSVLQEGKRRLRPGDVDAAFVASLRACEAAALLFTLGSTFNVKLWTLFRLSQSLECTFACASVTFRLLEAEFAR 400 YHASLQSDLCQTTTAAALQEYTRKHTRKETLTTLRRFQSRTQWTCTAFSHFCFTLFAFTGNSASAVDLGARGTELCATAI 480 AMSTFFLTQIAPLLLMSVKYDAPEKTRHPDVRSLVSVDAEHWVPSWVMRLMRRVEFMLLWCVVLMQRLTSFDKVSQMTAE 560 VALRFHVPRGIVFYLLPPSRHMLQMPPRRECVHVILLLLNALLAADRETVLADIKDLGGLKVVVASVLALSEKSSQQWHH 640 FYLQLCSMYGYTMLPSWNGRPACYVDERLPASLRRQFDVAKSPGGKSHLSEPVSSCHSAVDTRADASQACLSSTQASLAQ 720 CVGRSTGTVLDSIISSSLTAARSGRGSLDNFLLLVDIRPDVFSPELRSGDVDPVSELVAFDCSQLPWPFKDAAPPTTAES 800 WYGAPSSVAAAVEDAHLSVPLINVCEEDRVRVLRHHIARLTLLDEATCDGGPTPHVHKVVFERLSSASPGAAGDAPSTVE 880 GSADGVEFFSDYESGNLQRAIEVTDSEYDLVLSWDTATNSYTQWFSFGMRHFTPGKTYRFNILNMEKGDSTFNEGQKPLL 960 LHVPDGGNPSDPSAPRSKWTRAGEGIFYFGNAFLRPARAHYFGKNGETASAPAASPLSTSPRPLSTSVNTCAPVSHLGGR 1040 APPPVIAKKRTPAFPTLSPPPTTPPPFTAATSAESGVVKQKCYFTVTFSVTMPTTATGTVYLANCFPFTYTEMREHLAWL 1120 AREAHTCPTRSLLPQCLCWTPGGLQVPLLTVTALRNRDTGEPYTTDEIRRRPIALLVARVHPGETNASWVMQGLLDTLLC 1200 PPAVAAEYASHLCENFVFKVIPMLNADGVIMGNHRCSFAGVDLNRDYTNPKADFNPTLYTMKQLLRYWTGEEKRQVVMFA 1280 DFHGHSRAKNFLVYGCTMNTIRGIATHSRHKGTRGGDGGRRRRTRKASRTAPAGPEKVMAALLSQLFPSFSLSQSSFAVT 1360 KDKKGSARVVLYDEFGVRMSYGFEATMVGGLVCVPELLRVSAGTHDDDAAAPVSAVCKAEVHYSPTVFRAMGDVFLRALS 1440 ILFRQWAALTALAVDSGCSDRKSSPSDVLTSTVLQLSWSMTAAAGGDRDPPKNPFSPSSRESGAVLPRAGQYAAATRGDR 1520 RVGSPVRTGASAAPNEPGSGLSVVPVAGQAEALDYLFMADCREGATSAKDEDDKDEEGSIASASDISTEEDSEDAEMEED 1600 ELLTTTSEKHTRRRRSEAQYAGNASEVSEHSASSPVASGSDDQDWSGCNSSGSAAGDSDDSRSSVSSVDEEIPTNLFT 1680 ........P..............................................................P........ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ................................................................................ 1120 ................................................................................ 1200 ................................................................................ 1280 ............................................P................................... 1360 ................................................................................ 1440 ................................................................................ 1520 ................................................................................ 1600 ..............P............................................................... 1680 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 4 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.0200 4 ---MNLR|SR 0.101 . LmjF.33.0200 6 -MNLRSR|SS 0.147 . LmjF.33.0200 9 LRSRSSR|QA 0.586 *ProP* LmjF.33.0200 14 SRQANQR|TL 0.146 . LmjF.33.0200 21 TLSTSVR|DR 0.170 . LmjF.33.0200 23 STSVRDR|DS 0.278 . LmjF.33.0200 34 GVSVQLR|SC 0.137 . LmjF.33.0200 41 SCALQPR|PP 0.099 . LmjF.33.0200 48 PPVSGGR|SS 0.155 . LmjF.33.0200 54 RSSSTAK|ST 0.134 . LmjF.33.0200 57 STAKSTK|GA 0.083 . LmjF.33.0200 61 STKGAPK|CS 0.067 . LmjF.33.0200 71 PAASVPK|RS 0.069 . LmjF.33.0200 72 AASVPKR|SA 0.545 *ProP* LmjF.33.0200 76 PKRSAAK|RL 0.060 . LmjF.33.0200 77 KRSAAKR|LA 0.265 . LmjF.33.0200 81 AKRLALR|TR 0.086 . LmjF.33.0200 83 RLALRTR|LP 0.070 . LmjF.33.0200 88 TRLPYLR|SV 0.179 . LmjF.33.0200 107 PTSSSLR|FE 0.096 . LmjF.33.0200 110 SSLRFER|RS 0.182 . LmjF.33.0200 111 SLRFERR|SF 0.283 . LmjF.33.0200 120 SSSCVPR|EA 0.183 . LmjF.33.0200 127 EAATVHK|PT 0.083 . LmjF.33.0200 141 EVLQHVK|HL 0.063 . LmjF.33.0200 148 HLCSSVR|DS 0.120 . LmjF.33.0200 152 SVRDSEK|DA 0.076 . LmjF.33.0200 167 CSGSGAR|DR 0.090 . LmjF.33.0200 169 GSGARDR|RN 0.077 . LmjF.33.0200 170 SGARDRR|NN 0.460 . LmjF.33.0200 173 RDRRNNR|LA 0.304 . LmjF.33.0200 219 VSPPTPK|RD 0.059 . LmjF.33.0200 220 SPPTPKR|DA 0.403 . LmjF.33.0200 231 AQLHHTR|SH 0.143 . LmjF.33.0200 239 HSWNPQR|GL 0.108 . LmjF.33.0200 254 SGAFMSK|KE 0.064 . LmjF.33.0200 255 GAFMSKK|ER 0.101 . LmjF.33.0200 257 FMSKKER|RK 0.105 . LmjF.33.0200 258 MSKKERR|KA 0.267 . LmjF.33.0200 259 SKKERRK|AW 0.085 . LmjF.33.0200 267 WALFLHK|NT 0.058 . LmjF.33.0200 280 LIVNACR|SS 0.110 . LmjF.33.0200 286 RSSLAVR|EL 0.101 . LmjF.33.0200 303 FLYNVLR|HM 0.083 . LmjF.33.0200 309 RHMSGDK|QR 0.060 . LmjF.33.0200 311 MSGDKQR|KA 0.104 . LmjF.33.0200 312 SGDKQRK|AV 0.124 . LmjF.33.0200 319 AVVLCEK|LG 0.053 . LmjF.33.0200 324 EKLGVFR|VC 0.081 . LmjF.33.0200 334 SVLQEGK|RR 0.052 . LmjF.33.0200 335 VLQEGKR|RL 0.153 . LmjF.33.0200 336 LQEGKRR|LR 0.101 . LmjF.33.0200 338 EGKRRLR|PG 0.145 . LmjF.33.0200 351 AFVASLR|AC 0.085 . LmjF.33.0200 369 GSTFNVK|LW 0.057 . LmjF.33.0200 375 KLWTLFR|LS 0.083 . LmjF.33.0200 392 CASVTFR|LL 0.133 . LmjF.33.0200 400 LEAEFAR|YH 0.104 . LmjF.33.0200 423 ALQEYTR|KH 0.084 . LmjF.33.0200 424 LQEYTRK|HT 0.099 . LmjF.33.0200 427 YTRKHTR|KE 0.072 . LmjF.33.0200 428 TRKHTRK|ET 0.144 . LmjF.33.0200 435 ETLTTLR|RF 0.064 . LmjF.33.0200 436 TLTTLRR|FQ 0.146 . LmjF.33.0200 440 LRRFQSR|TQ 0.116 . LmjF.33.0200 471 AVDLGAR|GT 0.086 . LmjF.33.0200 499 LLLMSVK|YD 0.065 . LmjF.33.0200 505 KYDAPEK|TR 0.058 . LmjF.33.0200 507 DAPEKTR|HP 0.074 . LmjF.33.0200 512 TRHPDVR|SL 0.224 . LmjF.33.0200 529 VPSWVMR|LM 0.176 . LmjF.33.0200 532 WVMRLMR|RV 0.386 . LmjF.33.0200 533 VMRLMRR|VE 0.104 . LmjF.33.0200 547 CVVLMQR|LT 0.069 . LmjF.33.0200 553 RLTSFDK|VS 0.054 . LmjF.33.0200 564 TAEVALR|FH 0.085 . LmjF.33.0200 569 LRFHVPR|GI 0.131 . LmjF.33.0200 580 YLLPPSR|HM 0.075 . LmjF.33.0200 588 MLQMPPR|RE 0.086 . LmjF.33.0200 589 LQMPPRR|EC 0.133 . LmjF.33.0200 607 ALLAADR|ET 0.063 . LmjF.33.0200 615 TVLADIK|DL 0.068 . LmjF.33.0200 621 KDLGGLK|VV 0.060 . LmjF.33.0200 633 VLALSEK|SS 0.085 . LmjF.33.0200 660 LPSWNGR|PA 0.160 . LmjF.33.0200 668 ACYVDER|LP 0.078 . LmjF.33.0200 674 RLPASLR|RQ 0.081 . LmjF.33.0200 675 LPASLRR|QF 0.169 . LmjF.33.0200 681 RQFDVAK|SP 0.097 . LmjF.33.0200 686 AKSPGGK|SH 0.077 . LmjF.33.0200 703 HSAVDTR|AD 0.092 . LmjF.33.0200 724 LAQCVGR|ST 0.336 . LmjF.33.0200 742 SSLTAAR|SG 0.154 . LmjF.33.0200 745 TAARSGR|GS 0.408 . LmjF.33.0200 758 LLLVDIR|PD 0.069 . LmjF.33.0200 767 VFSPELR|SG 0.124 . LmjF.33.0200 790 QLPWPFK|DA 0.078 . LmjF.33.0200 829 NVCEEDR|VR 0.058 . LmjF.33.0200 831 CEEDRVR|VL 0.074 . LmjF.33.0200 834 DRVRVLR|HH 0.280 . LmjF.33.0200 839 LRHHIAR|LT 0.116 . LmjF.33.0200 858 PTPHVHK|VV 0.074 . LmjF.33.0200 863 HKVVFER|LS 0.124 . LmjF.33.0200 899 ESGNLQR|AI 0.103 . LmjF.33.0200 930 WFSFGMR|HF 0.108 . LmjF.33.0200 936 RHFTPGK|TY 0.061 . LmjF.33.0200 939 TPGKTYR|FN 0.124 . LmjF.33.0200 947 NILNMEK|GD 0.063 . LmjF.33.0200 957 TFNEGQK|PL 0.063 . LmjF.33.0200 976 SDPSAPR|SK 0.114 . LmjF.33.0200 978 PSAPRSK|WT 0.099 . LmjF.33.0200 981 PRSKWTR|AG 0.161 . LmjF.33.0200 995 FGNAFLR|PA 0.113 . LmjF.33.0200 998 AFLRPAR|AH 0.196 . LmjF.33.0200 1004 RAHYFGK|NG 0.073 . LmjF.33.0200 1022 PLSTSPR|PL 0.182 . LmjF.33.0200 1040 VSHLGGR|AP 0.090 . LmjF.33.0200 1048 PPPVIAK|KR 0.071 . LmjF.33.0200 1049 PPVIAKK|RT 0.092 . LmjF.33.0200 1050 PVIAKKR|TP 0.135 . LmjF.33.0200 1079 AESGVVK|QK 0.075 . LmjF.33.0200 1081 SGVVKQK|CY 0.082 . LmjF.33.0200 1114 FTYTEMR|EH 0.079 . LmjF.33.0200 1122 HLAWLAR|EA 0.146 . LmjF.33.0200 1130 AHTCPTR|SL 0.102 . LmjF.33.0200 1155 LTVTALR|NR 0.095 . LmjF.33.0200 1157 VTALRNR|DT 0.118 . LmjF.33.0200 1169 YTTDEIR|RR 0.072 . LmjF.33.0200 1170 TTDEIRR|RP 0.119 . LmjF.33.0200 1171 TDEIRRR|PI 0.121 . LmjF.33.0200 1179 IALLVAR|VH 0.079 . LmjF.33.0200 1219 CENFVFK|VI 0.066 . LmjF.33.0200 1235 VIMGNHR|CS 0.098 . LmjF.33.0200 1245 AGVDLNR|DY 0.089 . LmjF.33.0200 1251 RDYTNPK|AD 0.061 . LmjF.33.0200 1262 PTLYTMK|QL 0.061 . LmjF.33.0200 1266 TMKQLLR|YW 0.115 . LmjF.33.0200 1273 YWTGEEK|RQ 0.053 . LmjF.33.0200 1274 WTGEEKR|QV 0.201 . LmjF.33.0200 1287 DFHGHSR|AK 0.082 . LmjF.33.0200 1289 HGHSRAK|NF 0.073 . LmjF.33.0200 1302 CTMNTIR|GI 0.096 . LmjF.33.0200 1309 GIATHSR|HK 0.140 . LmjF.33.0200 1311 ATHSRHK|GT 0.074 . LmjF.33.0200 1314 SRHKGTR|GG 0.198 . LmjF.33.0200 1320 RGGDGGR|RR 0.067 . LmjF.33.0200 1321 GGDGGRR|RR 0.080 . LmjF.33.0200 1322 GDGGRRR|RT 0.167 . LmjF.33.0200 1323 DGGRRRR|TR 0.412 . LmjF.33.0200 1325 GRRRRTR|KA 0.515 *ProP* LmjF.33.0200 1326 RRRRTRK|AS 0.476 . LmjF.33.0200 1329 RTRKASR|TA 0.115 . LmjF.33.0200 1337 APAGPEK|VM 0.069 . LmjF.33.0200 1361 SSFAVTK|DK 0.077 . LmjF.33.0200 1363 FAVTKDK|KG 0.065 . LmjF.33.0200 1364 AVTKDKK|GS 0.083 . LmjF.33.0200 1368 DKKGSAR|VV 0.139 . LmjF.33.0200 1378 YDEFGVR|MS 0.092 . LmjF.33.0200 1399 CVPELLR|VS 0.058 . LmjF.33.0200 1418 PVSAVCK|AE 0.068 . LmjF.33.0200 1429 YSPTVFR|AM 0.136 . LmjF.33.0200 1437 MGDVFLR|AL 0.110 . LmjF.33.0200 1444 ALSILFR|QW 0.098 . LmjF.33.0200 1461 DSGCSDR|KS 0.101 . LmjF.33.0200 1462 SGCSDRK|SS 0.093 . LmjF.33.0200 1488 AAAGGDR|DP 0.087 . LmjF.33.0200 1492 GDRDPPK|NP 0.062 . LmjF.33.0200 1500 PFSPSSR|ES 0.166 . LmjF.33.0200 1508 SGAVLPR|AG 0.091 . LmjF.33.0200 1517 QYAAATR|GD 0.098 . LmjF.33.0200 1520 AATRGDR|RV 0.252 . LmjF.33.0200 1521 ATRGDRR|VG 0.146 . LmjF.33.0200 1527 RVGSPVR|TG 0.074 . LmjF.33.0200 1562 LFMADCR|EG 0.075 . LmjF.33.0200 1569 EGATSAK|DE 0.084 . LmjF.33.0200 1574 AKDEDDK|DE 0.071 . LmjF.33.0200 1609 LTTTSEK|HT 0.063 . LmjF.33.0200 1612 TSEKHTR|RR 0.085 . LmjF.33.0200 1613 SEKHTRR|RR 0.155 . LmjF.33.0200 1614 EKHTRRR|RS 0.245 . LmjF.33.0200 1615 KHTRRRR|SE 0.587 *ProP* LmjF.33.0200 1662 GDSDDSR|SS 0.145 . ____________________________^_________________
  • Fasta :-

    >LmjF.33.0200 ATGAACTTGCGCTCGCGCAGCAGCCGACAGGCTAACCAGCGCACGTTGTCGACTTCAGTG CGCGACCGTGACTCAGGCGACGGTGTCTCTGTTCAACTGCGCTCATGCGCACTACAACCG CGTCCGCCTGTCAGCGGCGGCCGCTCGTCTTCTACGGCGAAAAGCACCAAGGGTGCACCA AAATGTTCGCCGCCGGCAGCCTCCGTGCCGAAGAGATCGGCGGCAAAGCGTCTGGCGCTG CGCACCCGCCTGCCGTACCTGCGTTCCGTGCCGCCTCTTCCTGCGTCAACGAGCGGCGAG CCCACATCGTCCTCTCTTCGATTCGAGCGACGGTCGTTCTCGTCCAGCTGCGTGCCGCGT GAAGCAGCGACAGTGCACAAGCCCACGTACACCATCATCCCCGAGGTACTCCAGCACGTG AAACACCTTTGTAGTAGCGTGCGGGACTCGGAAAAGGATGCGTCGTTGCCGTCGGGGGCG TGCAGTGGCAGTGGCGCACGTGACCGACGAAACAACCGACTTGCGCTGCCGTCGATCTCC TGGCTGTCCGAGGACGCCACGGCAGTCGTGCAAGATATCGAGATGGTGCAGGGCATGCTG TTCTCGTCTCTGCAGAGTGGCAGCGCTGCCGATGCGGTGAGTCCGCCGACGCCTAAGCGC GACGCTGCGGGCGCGCAGCTGCATCACACGCGGAGCCATTCCTGGAATCCCCAAAGGGGT CTCACCTTCACCCCTGCCGGCTCTGGCGCCTTCATGTCCAAAAAGGAGCGTAGGAAGGCG TGGGCGCTGTTTCTGCACAAGAACACACACGCGTTTGCCCTCATCGTGAATGCCTGCAGA TCCTCTTTGGCGGTGCGAGAGCTGCAGGTAGGGTCCGTGTTGCTCACCTTTCTCTATAAT GTCTTGAGGCACATGTCAGGGGATAAGCAGCGTAAGGCGGTGGTCCTGTGCGAGAAACTT GGTGTTTTCCGTGTGTGCACGTCGGTGCTCCAAGAAGGGAAGCGGCGCCTGCGTCCCGGC GATGTCGATGCCGCCTTTGTTGCATCTCTCCGCGCGTGCGAGGCGGCTGCGCTGCTCTTC ACCCTTGGTAGCACCTTCAACGTCAAGCTGTGGACCCTCTTCCGTCTTTCACAGAGCCTC GAGTGCACGTTTGCCTGCGCGTCCGTAACGTTCCGGCTGCTGGAGGCGGAGTTTGCGAGG TACCACGCATCACTGCAGTCCGACCTTTGCCAGACCACCACGGCGGCGGCACTGCAGGAG TACACACGGAAGCACACCCGTAAAGAAACGCTGACAACGCTGCGCCGCTTTCAATCGCGC ACGCAATGGACCTGCACGGCCTTTTCCCACTTCTGCTTCACGCTGTTCGCCTTCACTGGG AACTCCGCGTCGGCTGTCGATCTTGGCGCGCGCGGGACGGAGCTCTGCGCCACTGCCATT GCCATGAGCACATTTTTTTTGACACAAATCGCGCCGCTGCTGCTGATGAGCGTCAAGTAC GATGCGCCAGAGAAGACACGACACCCGGATGTCAGGTCGCTGGTATCCGTCGATGCCGAG CACTGGGTGCCGTCGTGGGTGATGCGGCTTATGCGGCGGGTGGAGTTCATGTTGCTGTGG TGTGTGGTGTTGATGCAGCGATTGACAAGCTTCGACAAGGTTAGTCAGATGACTGCTGAG GTTGCATTGCGCTTTCACGTGCCGCGCGGCATCGTCTTCTACTTGCTGCCACCGTCGCGC CACATGTTGCAGATGCCGCCCCGACGCGAGTGCGTCCACGTTATTCTGCTCCTGCTGAAC GCATTGCTGGCAGCCGACAGGGAGACCGTGCTGGCGGACATAAAGGACCTTGGCGGGCTG AAGGTCGTGGTGGCGAGCGTCTTGGCGTTGTCTGAGAAGTCGTCGCAGCAGTGGCACCAC TTCTACCTCCAGTTGTGCTCAATGTACGGGTACACGATGCTGCCGTCATGGAATGGCCGC CCTGCATGCTACGTCGACGAGCGCTTGCCGGCATCTCTGCGGCGCCAATTCGACGTTGCC AAGTCGCCAGGTGGAAAGTCTCACTTGTCGGAGCCCGTGAGCAGCTGCCACAGCGCGGTC GATACGAGGGCAGACGCCTCTCAGGCGTGCCTGTCGTCGACGCAGGCGTCGCTGGCTCAG TGTGTCGGTCGCTCGACGGGGACTGTGTTGGACTCGATCATCTCTTCCTCCCTCACAGCA GCGCGTTCGGGACGTGGGAGTTTGGATAATTTTCTCCTGCTCGTAGACATCCGCCCAGAT GTGTTCTCGCCAGAGCTGCGCAGCGGCGACGTGGATCCTGTGTCGGAGCTGGTGGCGTTC GACTGCTCACAGCTGCCCTGGCCGTTCAAGGATGCGGCACCACCAACGACGGCGGAGAGC TGGTACGGCGCCCCCTCCTCTGTTGCTGCTGCCGTAGAGGACGCGCACCTCAGCGTGCCG CTGATCAATGTGTGTGAGGAAGACCGGGTTCGGGTGCTGCGCCACCACATCGCGCGGCTT ACGCTCTTGGACGAAGCGACGTGCGATGGTGGTCCCACTCCGCATGTGCACAAGGTGGTG TTCGAGCGACTGAGCAGCGCGTCACCCGGCGCGGCTGGAGACGCGCCCAGTACCGTTGAG GGGAGCGCTGATGGAGTCGAGTTCTTTTCGGACTACGAGAGCGGCAACCTGCAGCGCGCC ATCGAAGTGACGGACAGCGAATACGACCTAGTCCTTTCCTGGGACACCGCCACCAACTCT TACACGCAGTGGTTCAGTTTTGGCATGCGCCACTTCACCCCCGGCAAAACGTACCGCTTC AATATCCTGAATATGGAAAAGGGTGACTCGACCTTTAACGAGGGCCAAAAACCACTGCTG CTGCACGTGCCGGACGGCGGAAACCCTTCCGACCCGAGCGCGCCGCGGTCCAAGTGGACT CGCGCTGGCGAGGGCATCTTCTACTTTGGCAACGCGTTCCTCCGTCCTGCGCGCGCACAC TACTTCGGGAAAAACGGTGAGACCGCCAGCGCTCCGGCGGCATCCCCACTCTCCACGTCT CCGCGACCGCTGTCAACGTCGGTGAACACGTGCGCGCCGGTTTCGCACCTCGGCGGGCGT GCACCGCCGCCGGTGATCGCGAAGAAGCGCACACCGGCTTTCCCCACACTGTCACCGCCG CCCACGACGCCGCCGCCGTTTACTGCAGCCACATCTGCAGAGTCGGGGGTGGTGAAGCAG AAGTGCTACTTCACAGTCACCTTCTCCGTCACCATGCCGACGACGGCGACCGGAACGGTT TACCTTGCCAACTGCTTCCCGTTCACATACACCGAGATGCGAGAGCATCTCGCGTGGCTG GCGAGAGAGGCTCACACGTGCCCAACACGCTCGCTGTTGCCGCAGTGCTTATGCTGGACA CCGGGCGGGTTGCAGGTGCCGCTGCTGACGGTGACGGCGCTACGTAACCGAGATACTGGG GAGCCGTACACCACGGACGAAATACGGCGCCGCCCCATCGCGCTGCTTGTGGCGCGTGTG CACCCCGGCGAAACAAACGCCAGCTGGGTCATGCAGGGTCTGCTGGACACCCTTCTCTGC CCGCCAGCGGTGGCCGCAGAATACGCGTCCCACTTGTGTGAAAACTTTGTCTTCAAGGTG ATACCCATGCTGAACGCCGACGGCGTGATCATGGGCAACCATCGCTGCTCATTCGCCGGC GTAGACCTAAATCGCGACTACACGAATCCTAAGGCAGATTTCAACCCCACTCTCTACACG ATGAAGCAGCTGTTACGATACTGGACGGGTGAGGAGAAGCGTCAGGTTGTGATGTTTGCC GACTTTCACGGTCATTCGCGAGCCAAGAACTTTCTTGTATATGGGTGCACTATGAACACG ATACGAGGCATCGCCACGCACTCTCGCCACAAAGGCACCAGAGGCGGTGATGGCGGTCGA CGTCGTCGCACTCGGAAAGCGTCCCGCACGGCCCCCGCTGGCCCGGAGAAGGTCATGGCT GCCTTGCTCTCACAGCTTTTCCCGTCCTTCTCCCTCTCGCAGAGTTCCTTTGCTGTAACC AAAGACAAGAAGGGGTCTGCGCGTGTTGTCCTCTACGACGAGTTCGGTGTGCGCATGAGC TACGGCTTCGAGGCAACAATGGTGGGTGGCCTGGTCTGTGTTCCCGAGCTGCTGCGAGTG AGCGCTGGCACCCACGACGACGACGCTGCCGCACCGGTGTCAGCCGTGTGCAAGGCGGAG GTGCACTACAGTCCCACCGTATTTCGTGCCATGGGGGACGTCTTTCTGCGAGCGTTGTCA ATTCTTTTTCGACAATGGGCGGCGCTTACGGCGCTGGCGGTGGACAGCGGCTGCAGCGAT CGAAAGAGCAGCCCAAGCGATGTGCTCACGTCAACGGTGCTGCAACTGTCGTGGAGCATG ACTGCTGCCGCTGGAGGCGACCGTGATCCGCCCAAGAACCCTTTTTCACCCTCCTCCAGG GAGTCCGGAGCGGTTCTTCCTCGCGCGGGACAGTACGCGGCAGCGACACGTGGTGACCGA CGAGTGGGGTCTCCGGTGCGTACCGGCGCGTCGGCGGCACCGAACGAACCCGGTAGCGGG CTATCTGTCGTTCCCGTGGCGGGTCAAGCGGAGGCACTGGACTACCTGTTCATGGCAGAC TGCCGTGAAGGGGCAACATCAGCCAAGGATGAGGACGACAAAGACGAGGAGGGGAGCATT GCGAGCGCCAGCGATATCTCTACCGAGGAGGACAGCGAAGATGCTGAGATGGAGGAGGAT GAGCTGCTCACGACGACGAGCGAGAAACACACACGGAGGAGGCGTTCAGAGGCTCAGTAT GCCGGGAACGCATCTGAGGTTAGTGAACATAGTGCGTCCTCGCCCGTCGCCTCTGGTAGC GACGACCAAGACTGGTCGGGCTGCAACTCCTCCGGCAGCGCCGCTGGCGACTCTGACGAT AGCCGAAGCAGCGTGAGCAGTGTGGATGAGGAGATTCCTACGAATCTATTCACATAG
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  • Fasta :-

    MNLRSRSSRQANQRTLSTSVRDRDSGDGVSVQLRSCALQPRPPVSGGRSSSTAKSTKGAP KCSPPAASVPKRSAAKRLALRTRLPYLRSVPPLPASTSGEPTSSSLRFERRSFSSSCVPR EAATVHKPTYTIIPEVLQHVKHLCSSVRDSEKDASLPSGACSGSGARDRRNNRLALPSIS WLSEDATAVVQDIEMVQGMLFSSLQSGSAADAVSPPTPKRDAAGAQLHHTRSHSWNPQRG LTFTPAGSGAFMSKKERRKAWALFLHKNTHAFALIVNACRSSLAVRELQVGSVLLTFLYN VLRHMSGDKQRKAVVLCEKLGVFRVCTSVLQEGKRRLRPGDVDAAFVASLRACEAAALLF TLGSTFNVKLWTLFRLSQSLECTFACASVTFRLLEAEFARYHASLQSDLCQTTTAAALQE YTRKHTRKETLTTLRRFQSRTQWTCTAFSHFCFTLFAFTGNSASAVDLGARGTELCATAI AMSTFFLTQIAPLLLMSVKYDAPEKTRHPDVRSLVSVDAEHWVPSWVMRLMRRVEFMLLW CVVLMQRLTSFDKVSQMTAEVALRFHVPRGIVFYLLPPSRHMLQMPPRRECVHVILLLLN ALLAADRETVLADIKDLGGLKVVVASVLALSEKSSQQWHHFYLQLCSMYGYTMLPSWNGR PACYVDERLPASLRRQFDVAKSPGGKSHLSEPVSSCHSAVDTRADASQACLSSTQASLAQ CVGRSTGTVLDSIISSSLTAARSGRGSLDNFLLLVDIRPDVFSPELRSGDVDPVSELVAF DCSQLPWPFKDAAPPTTAESWYGAPSSVAAAVEDAHLSVPLINVCEEDRVRVLRHHIARL TLLDEATCDGGPTPHVHKVVFERLSSASPGAAGDAPSTVEGSADGVEFFSDYESGNLQRA IEVTDSEYDLVLSWDTATNSYTQWFSFGMRHFTPGKTYRFNILNMEKGDSTFNEGQKPLL LHVPDGGNPSDPSAPRSKWTRAGEGIFYFGNAFLRPARAHYFGKNGETASAPAASPLSTS PRPLSTSVNTCAPVSHLGGRAPPPVIAKKRTPAFPTLSPPPTTPPPFTAATSAESGVVKQ KCYFTVTFSVTMPTTATGTVYLANCFPFTYTEMREHLAWLAREAHTCPTRSLLPQCLCWT PGGLQVPLLTVTALRNRDTGEPYTTDEIRRRPIALLVARVHPGETNASWVMQGLLDTLLC PPAVAAEYASHLCENFVFKVIPMLNADGVIMGNHRCSFAGVDLNRDYTNPKADFNPTLYT MKQLLRYWTGEEKRQVVMFADFHGHSRAKNFLVYGCTMNTIRGIATHSRHKGTRGGDGGR RRRTRKASRTAPAGPEKVMAALLSQLFPSFSLSQSSFAVTKDKKGSARVVLYDEFGVRMS YGFEATMVGGLVCVPELLRVSAGTHDDDAAAPVSAVCKAEVHYSPTVFRAMGDVFLRALS ILFRQWAALTALAVDSGCSDRKSSPSDVLTSTVLQLSWSMTAAAGGDRDPPKNPFSPSSR ESGAVLPRAGQYAAATRGDRRVGSPVRTGASAAPNEPGSGLSVVPVAGQAEALDYLFMAD CREGATSAKDEDDKDEEGSIASASDISTEEDSEDAEMEEDELLTTTSEKHTRRRRSEAQY AGNASEVSEHSASSPVASGSDDQDWSGCNSSGSAAGDSDDSRSSVSSVDEEIPTNLFT

  • title: Zn binding site
  • coordinates: H1181,E1184,H1283
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.0200112 SFERRSFSSS0.993unspLmjF.33.0200112 SFERRSFSSS0.993unspLmjF.33.0200112 SFERRSFSSS0.993unspLmjF.33.0200146 SHLCSSVRDS0.997unspLmjF.33.0200150 SSVRDSEKDA0.998unspLmjF.33.0200234 STRSHSWNPQ0.99unspLmjF.33.0200698 SSSCHSAVDT0.995unspLmjF.33.0200906 SEVTDSEYDL0.996unspLmjF.33.02001328 STRKASRTAP0.994unspLmjF.33.02001464 SDRKSSPSDV0.998unspLmjF.33.02001524 SRRVGSPVRT0.996unspLmjF.33.02001567 SEGATSAKDE0.998unspLmjF.33.02001587 SASDISTEED0.997unspLmjF.33.02001616 SRRRRSEAQY0.997unspLmjF.33.02001638 SSPVASGSDD0.993unspLmjF.33.02001664 SDSRSSVSSV0.996unspLmjF.33.02001666 SRSSVSSVDE0.997unspLmjF.33.02001667 SSSVSSVDEE0.996unspLmjF.33.020019 STLSTSVRDR0.998unspLmjF.33.020055 SSTAKSTKGA0.997unsp

LmjF.33.0200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India