LmjF.33.2540 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LmjF.33.2540OTHER0.9998670.0000570.000077
No Results

  • Fasta :-

    >LmjF.33.2540 MEPYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KSLIESATKGSDELNAVQRANLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKA NDFAKFLPVLRDLVALAREEGTYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKLLQQVKPGYIRVDADEVCYPLHVIL RYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGGDDIGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRNGDLHPLLKKQQEKIWDHGCLYETDDLMTRATG ETLNPEYLRRHLEARYLKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/790 Sequence name : 790 Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 3.494 CoefTot : 0.000 ChDiff : -15 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 0.841 0.091 0.509 MesoH : -0.880 -0.008 -0.492 0.162 MuHd_075 : 10.990 7.433 2.854 1.398 MuHd_095 : 23.817 15.488 7.619 6.860 MuHd_100 : 31.781 22.054 9.471 8.778 MuHd_105 : 36.808 27.047 10.485 9.628 Hmax_075 : 0.933 5.483 -1.910 2.158 Hmax_095 : 2.100 8.900 -0.398 4.280 Hmax_100 : 5.600 14.000 0.611 5.120 Hmax_105 : 14.100 16.200 2.528 6.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7771 0.2229 DFMC : 0.7903 0.2097
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 LmjF.33.2540 MEPYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEVKSLIESATKGSDELNAVQRA 80 NLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKANDFAKFLPVLRDLVALAREEGTYLAAGTSLSPYEALMNEY 160 EPGITTQKLDEVYANVKSWLPQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK 240 EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFAEFQIGHATPFIDYLTTRLPE 320 FFEAQPAFSQDNMRKLLQQVKPGYIRVDADEVCYPLHVILRYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGGDDI 400 GCLQDVHWSMGALGYFPTYSLGAMYAAQIMASIRKELGDDKVDECLRNGDLHPLLKKQQEKIWDHGCLYETDDLMTRATG 480 ETLNPEYLRRHLEARYLKA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.2540 5 --MEPYK|KL 0.079 . LmjF.33.2540 6 -MEPYKK|LE 0.072 . LmjF.33.2540 13 LETIFTK|VY 0.056 . LmjF.33.2540 16 IFTKVYR|LD 0.083 . LmjF.33.2540 35 NTNMPPK|GE 0.073 . LmjF.33.2540 40 PKGEESR|GE 0.091 . LmjF.33.2540 51 AMLSELR|FG 0.074 . LmjF.33.2540 61 ITAPEVK|SL 0.082 . LmjF.33.2540 69 LIESATK|GS 0.061 . LmjF.33.2540 79 ELNAVQR|AN 0.096 . LmjF.33.2540 83 VQRANLR|EM 0.078 . LmjF.33.2540 86 ANLREMR|RA 0.286 . LmjF.33.2540 87 NLREMRR|AW 0.145 . LmjF.33.2540 90 EMRRAWK|SA 0.288 . LmjF.33.2540 102 PAEFVGR|KM 0.089 . LmjF.33.2540 103 AEFVGRK|MR 0.067 . LmjF.33.2540 105 FVGRKMR|LT 0.318 . LmjF.33.2540 115 HAHSVWR|DS 0.168 . LmjF.33.2540 118 SVWRDSR|KA 0.241 . LmjF.33.2540 119 VWRDSRK|AN 0.101 . LmjF.33.2540 125 KANDFAK|FL 0.085 . LmjF.33.2540 131 KFLPVLR|DL 0.081 . LmjF.33.2540 138 DLVALAR|EE 0.095 . LmjF.33.2540 168 PGITTQK|LD 0.057 . LmjF.33.2540 177 EVYANVK|SW 0.070 . LmjF.33.2540 185 WLPQLLK|DI 0.069 . LmjF.33.2540 190 LKDIVQK|QS 0.088 . LmjF.33.2540 202 VIAFSQK|FP 0.072 . LmjF.33.2540 207 QKFPQDK|QE 0.062 . LmjF.33.2540 213 KQEALCK|EF 0.067 . LmjF.33.2540 217 LCKEFMK|IW 0.068 . LmjF.33.2540 227 FDTDAGR|LD 0.062 . LmjF.33.2540 240 PFTGMTK|ED 0.056 . LmjF.33.2540 244 MTKEDCR|LT 0.087 . LmjF.33.2540 269 HESGHGK|YE 0.084 . LmjF.33.2540 277 EQNCGPR|EH 0.092 . LmjF.33.2540 288 QPVCNAR|SL 0.235 . LmjF.33.2540 317 IDYLTTR|LP 0.098 . LmjF.33.2540 334 FSQDNMR|KL 0.098 . LmjF.33.2540 335 SQDNMRK|LL 0.098 . LmjF.33.2540 341 KLLQQVK|PG 0.057 . LmjF.33.2540 346 VKPGYIR|VD 0.070 . LmjF.33.2540 361 PLHVILR|YE 0.088 . LmjF.33.2540 366 LRYEIER|DL 0.134 . LmjF.33.2540 372 RDLMEGK|ME 0.057 . LmjF.33.2540 380 EVEDVPR|AW 0.096 . LmjF.33.2540 385 PRAWNAK|MQ 0.084 . LmjF.33.2540 434 QIMASIR|KE 0.070 . LmjF.33.2540 435 IMASIRK|EL 0.101 . LmjF.33.2540 441 KELGDDK|VD 0.055 . LmjF.33.2540 447 KVDECLR|NG 0.062 . LmjF.33.2540 456 DLHPLLK|KQ 0.060 . LmjF.33.2540 457 LHPLLKK|QQ 0.105 . LmjF.33.2540 461 LKKQQEK|IW 0.077 . LmjF.33.2540 477 TDDLMTR|AT 0.099 . LmjF.33.2540 489 LNPEYLR|RH 0.068 . LmjF.33.2540 490 NPEYLRR|HL 0.141 . LmjF.33.2540 495 RRHLEAR|YL 0.190 . LmjF.33.2540 498 LEARYLK|A- 0.130 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.2540 ATGGAGCCGTACAAGAAGCTGGAAACGATCTTTACAAAGGTCTACCGCCTCGACCACTTC CTTGGTCTCGGCAACTGGGACATGAACACAAACATGCCCCCCAAGGGCGAGGAGTCACGC GGTGAGGCGATGGCGATGCTCTCGGAGCTCCGCTTTGGCTTCATCACGGCACCGGAGGTG AAGAGCCTTATTGAGAGCGCCACCAAGGGCAGCGACGAGCTGAATGCGGTGCAGCGCGCA AACTTACGGGAAATGAGGCGTGCGTGGAAGAGCGCCACCGCCTTGCCGGCAGAGTTTGTG GGCCGCAAGATGCGCCTCACCACACACGCGCACAGCGTGTGGCGCGACAGCCGCAAAGCA AATGACTTTGCCAAGTTCCTACCGGTGCTTAGGGACCTGGTGGCGCTCGCCCGTGAGGAG GGCACCTACCTTGCCGCCGGCACCTCCCTCTCCCCGTATGAGGCGCTCATGAACGAGTAC GAGCCAGGCATCACGACACAGAAGCTGGATGAGGTGTACGCAAATGTGAAGTCGTGGCTG CCGCAGCTGCTAAAGGACATTGTGCAAAAGCAGTCCGGCGACGCGGTGATAGCGTTCTCG CAGAAGTTCCCGCAGGACAAGCAGGAAGCACTGTGCAAGGAGTTCATGAAGATCTGGCAC TTCGACACCGATGCCGGTCGCCTCGACGTCAGCCCCCACCCTTTTACGGGAATGACGAAG GAGGACTGCCGACTCACAACAAACTACATCGAAGACACGTTTGTGCAGAGCTTGTACGGC GTCATCCACGAGAGCGGACATGGCAAGTATGAGCAGAACTGTGGCCCGCGCGAGCACATC ACGCAGCCGGTGTGCAACGCCCGCTCTCTTGGCCTGCATGAGAGCCAGAGCCTCTTTGCA GAGTTTCAGATCGGCCACGCGACGCCCTTCATCGACTACCTCACAACTCGCCTTCCTGAG TTCTTCGAGGCGCAGCCAGCGTTCTCGCAGGACAACATGCGCAAGTTGCTGCAGCAGGTG AAGCCTGGCTACATCCGCGTCGATGCCGACGAGGTGTGCTACCCGCTACACGTGATCCTG CGCTATGAGATCGAGCGCGACTTAATGGAGGGCAAGATGGAGGTGGAAGACGTGCCGCGC GCGTGGAACGCAAAGATGCAGGAGTACTTGGGTCTCTCAACGGAGGGCGGTGACGACATT GGGTGCCTGCAGGACGTGCATTGGTCCATGGGTGCGCTCGGCTACTTCCCGACGTACTCG CTCGGTGCCATGTATGCGGCGCAGATCATGGCGAGCATCCGAAAGGAGCTGGGAGACGAC AAGGTGGATGAGTGCCTGCGCAACGGTGACCTCCACCCCCTCCTGAAGAAGCAGCAGGAG AAGATCTGGGACCACGGATGCCTGTACGAGACAGATGACCTCATGACGCGTGCGACGGGA GAGACGCTGAACCCCGAGTACCTGCGCCGTCACCTGGAGGCGCGCTACCTAAAGGCCTGA
  • Download Fasta

  • Fasta :-

    MEPYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KSLIESATKGSDELNAVQRANLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKA NDFAKFLPVLRDLVALAREEGTYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKLLQQVKPGYIRVDADEVCYPLHVIL RYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGGDDIGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRNGDLHPLLKKQQEKIWDHGCLYETDDLMTRATG ETLNPEYLRRHLEARYLKA

  • title: metal binding site
  • coordinates: H263,H267,E294
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.2540393 SYLGLSTEGG0.99unspLmjF.33.2540393 SYLGLSTEGG0.99unspLmjF.33.2540393 SYLGLSTEGG0.99unspLmjF.33.2540117 SVWRDSRKAN0.997unspLmjF.33.2540151 SGTSLSPYEA0.993unsp

LmjF.33.2540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India