LmjF.33.2570 | metallo-peptidase, Clan MF, Family M17

_IDPredictionOTHERSPmTPCS_Position
LmjF.33.2570OTHER0.9999370.0000330.000030
No Results

  • Fasta :-

    >LmjF.33.2570 MGTYKRIRSQSAYEEANVSAFVDSCVEYASSVTFHAVEKSRALTSKTGQVQTVLVLGTDA QLKEMAAAAAVCPHYDAAACAAAATAPESRAHVVKVTATIRLLIGKVPSVASRHNCASRP DQVSEIVKQAMAECPAADAEAGLDIYYLGSDHEVSVAVAIARSCRRSFTAKRGHAEQSYL SVGRPVRVVMPSGKTAQLAVIAQCVQLCQRLVDAPTNLLDTVTFTEIAVRWAAKLKAAGI DVSANVIAGEELRERGYGGLYGTGKAAEYPPHLVTLSYKPKAGMLPKDRIALVGKGIVYD TGGLAIKPRDGMCTMKHDMGGAAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRND DILRMKSGVTVEVNNTDAEGRLVLSDGVYHACKELSYTPSIIVDMATLTGAQGVATGQHH AAIYANSEASENRFVAAGKACGDLCFPVVYCPEFHNAEFASAVADCRNSVKSRANAQVSC AGQFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIAQTFAAELL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/358 Sequence name : 358 Sequence length : 528 VALUES OF COMPUTED PARAMETERS Coef20 : 4.027 CoefTot : -0.197 ChDiff : -2 ZoneTo : 13 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.065 0.505 0.707 MesoH : -0.215 0.673 -0.184 0.269 MuHd_075 : 20.443 13.064 6.676 3.971 MuHd_095 : 9.448 9.379 3.685 2.479 MuHd_100 : 3.961 8.246 1.572 2.158 MuHd_105 : 5.080 4.321 1.167 1.509 Hmax_075 : 4.300 2.700 -0.525 2.110 Hmax_095 : -5.337 -1.100 -3.780 1.050 Hmax_100 : -1.300 0.500 -2.671 1.050 Hmax_105 : -4.000 1.500 -2.987 1.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9715 0.0285 DFMC : 0.9259 0.0741
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 528 LmjF.33.2570 MGTYKRIRSQSAYEEANVSAFVDSCVEYASSVTFHAVEKSRALTSKTGQVQTVLVLGTDAQLKEMAAAAAVCPHYDAAAC 80 AAAATAPESRAHVVKVTATIRLLIGKVPSVASRHNCASRPDQVSEIVKQAMAECPAADAEAGLDIYYLGSDHEVSVAVAI 160 ARSCRRSFTAKRGHAEQSYLSVGRPVRVVMPSGKTAQLAVIAQCVQLCQRLVDAPTNLLDTVTFTEIAVRWAAKLKAAGI 240 DVSANVIAGEELRERGYGGLYGTGKAAEYPPHLVTLSYKPKAGMLPKDRIALVGKGIVYDTGGLAIKPRDGMCTMKHDMG 320 GAAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRNDDILRMKSGVTVEVNNTDAEGRLVLSDGVYHACKELSYTPS 400 IIVDMATLTGAQGVATGQHHAAIYANSEASENRFVAAGKACGDLCFPVVYCPEFHNAEFASAVADCRNSVKSRANAQVSC 480 AGQFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIAQTFAAELL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.2570 5 --MGTYK|RI 0.063 . LmjF.33.2570 6 -MGTYKR|IR 0.172 . LmjF.33.2570 8 GTYKRIR|SQ 0.203 . LmjF.33.2570 39 TFHAVEK|SR 0.069 . LmjF.33.2570 41 HAVEKSR|AL 0.118 . LmjF.33.2570 46 SRALTSK|TG 0.075 . LmjF.33.2570 63 GTDAQLK|EM 0.058 . LmjF.33.2570 90 ATAPESR|AH 0.085 . LmjF.33.2570 95 SRAHVVK|VT 0.088 . LmjF.33.2570 101 KVTATIR|LL 0.085 . LmjF.33.2570 106 IRLLIGK|VP 0.064 . LmjF.33.2570 113 VPSVASR|HN 0.164 . LmjF.33.2570 119 RHNCASR|PD 0.104 . LmjF.33.2570 128 QVSEIVK|QA 0.081 . LmjF.33.2570 162 VAVAIAR|SC 0.151 . LmjF.33.2570 165 AIARSCR|RS 0.312 . LmjF.33.2570 166 IARSCRR|SF 0.294 . LmjF.33.2570 171 RRSFTAK|RG 0.096 . LmjF.33.2570 172 RSFTAKR|GH 0.149 . LmjF.33.2570 184 SYLSVGR|PV 0.139 . LmjF.33.2570 187 SVGRPVR|VV 0.498 . LmjF.33.2570 194 VVMPSGK|TA 0.066 . LmjF.33.2570 210 CVQLCQR|LV 0.096 . LmjF.33.2570 230 FTEIAVR|WA 0.085 . LmjF.33.2570 234 AVRWAAK|LK 0.079 . LmjF.33.2570 236 RWAAKLK|AA 0.092 . LmjF.33.2570 253 IAGEELR|ER 0.092 . LmjF.33.2570 255 GEELRER|GY 0.110 . LmjF.33.2570 265 GLYGTGK|AA 0.076 . LmjF.33.2570 279 LVTLSYK|PK 0.063 . LmjF.33.2570 281 TLSYKPK|AG 0.071 . LmjF.33.2570 287 KAGMLPK|DR 0.072 . LmjF.33.2570 289 GMLPKDR|IA 0.097 . LmjF.33.2570 295 RIALVGK|GI 0.071 . LmjF.33.2570 307 TGGLAIK|PR 0.062 . LmjF.33.2570 309 GLAIKPR|DG 0.141 . LmjF.33.2570 316 DGMCTMK|HD 0.070 . LmjF.33.2570 336 LCLAMMR|AP 0.073 . LmjF.33.2570 355 DNAVGPR|SQ 0.103 . LmjF.33.2570 358 VGPRSQR|ND 0.193 . LmjF.33.2570 364 RNDDILR|MK 0.093 . LmjF.33.2570 366 DDILRMK|SG 0.078 . LmjF.33.2570 381 NTDAEGR|LV 0.088 . LmjF.33.2570 393 GVYHACK|EL 0.065 . LmjF.33.2570 433 SEASENR|FV 0.194 . LmjF.33.2570 439 RFVAAGK|AC 0.071 . LmjF.33.2570 467 SAVADCR|NS 0.081 . LmjF.33.2570 471 DCRNSVK|SR 0.078 . LmjF.33.2570 473 RNSVKSR|AN 0.155 . LmjF.33.2570 491 IGNNLSK|DY 0.094 . LmjF.33.2570 508 LAAPATR|DE 0.120 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.2570 ATGGGCACCTACAAGCGCATCCGCTCCCAGTCGGCGTACGAAGAGGCGAACGTGTCGGCC TTCGTAGACAGCTGCGTGGAGTATGCAAGCAGCGTGACGTTCCACGCGGTGGAGAAGAGC CGCGCGTTGACTTCAAAGACGGGGCAGGTGCAGACGGTGCTTGTGCTGGGCACGGATGCG CAGCTGAAGGAGATGGCGGCGGCGGCGGCGGTGTGTCCGCACTACGATGCGGCGGCGTGC GCTGCTGCGGCGACGGCGCCGGAGTCGCGTGCGCACGTCGTGAAGGTGACAGCGACGATA CGGCTGCTGATTGGGAAGGTGCCGTCCGTCGCGTCGCGCCACAACTGCGCGTCGCGTCCG GACCAGGTGAGCGAGATCGTGAAGCAGGCAATGGCGGAGTGCCCCGCCGCGGACGCCGAG GCTGGGCTGGACATCTACTACCTGGGCAGCGACCACGAGGTGAGCGTGGCCGTCGCGATT GCGCGGTCGTGCAGGCGATCGTTTACTGCGAAGCGCGGGCACGCGGAGCAGAGCTACCTG AGCGTTGGCCGCCCGGTGCGCGTGGTGATGCCGTCCGGCAAGACAGCGCAGCTCGCTGTG ATTGCGCAGTGCGTGCAGCTGTGCCAGCGGCTGGTGGACGCGCCAACGAACCTGCTGGAC ACGGTGACGTTCACGGAGATTGCTGTGCGGTGGGCGGCGAAGCTGAAGGCCGCCGGCATC GATGTGTCCGCGAACGTGATCGCTGGAGAGGAGCTCCGCGAGCGTGGGTACGGTGGTCTT TACGGTACCGGGAAGGCCGCTGAGTACCCGCCGCACCTTGTGACATTGTCGTACAAGCCG AAGGCTGGTATGTTACCCAAGGATCGAATTGCACTTGTGGGCAAAGGCATCGTGTACGAC ACCGGCGGCCTTGCGATCAAGCCCCGCGACGGCATGTGTACGATGAAGCACGACATGGGC GGTGCAGCGGCCGTGTTCTGCGGCTTGTTGTGCCTGGCGATGATGCGTGCGCCTATTGAG GTGTCGAGCATCTTGTGTCTCGCTGACAACGCCGTGGGCCCCCGCTCGCAGCGCAATGAC GACATCCTGCGCATGAAGTCCGGCGTCACCGTGGAGGTTAACAACACAGACGCCGAAGGC CGCCTTGTGCTCTCGGACGGTGTTTACCATGCCTGCAAGGAGCTGAGCTACACGCCGAGC ATCATTGTGGACATGGCGACGCTGACAGGCGCGCAAGGCGTTGCCACTGGTCAGCACCAC GCTGCCATCTACGCGAACTCAGAGGCCAGCGAGAACCGCTTTGTGGCCGCCGGCAAGGCG TGCGGCGACTTGTGTTTTCCAGTCGTGTACTGCCCTGAGTTTCACAACGCCGAGTTTGCC AGCGCTGTGGCCGATTGTAGGAATAGTGTAAAGAGCCGTGCCAATGCACAGGTGAGCTGC GCCGGGCAGTTTATCGGCAACAATCTGTCCAAGGACTACGAGGGCGAATGGGTGCATGTT GACCTGGCCGCGCCCGCGACCCGCGATGAGGCCACAGGGTTTGGTGTCGCCTTGATTGCG CAGACGTTTGCAGCGGAGCTGTTGTAG
  • Download Fasta

  • Fasta :-

    MGTYKRIRSQSAYEEANVSAFVDSCVEYASSVTFHAVEKSRALTSKTGQVQTVLVLGTDA QLKEMAAAAAVCPHYDAAACAAAATAPESRAHVVKVTATIRLLIGKVPSVASRHNCASRP DQVSEIVKQAMAECPAADAEAGLDIYYLGSDHEVSVAVAIARSCRRSFTAKRGHAEQSYL SVGRPVRVVMPSGKTAQLAVIAQCVQLCQRLVDAPTNLLDTVTFTEIAVRWAAKLKAAGI DVSANVIAGEELRERGYGGLYGTGKAAEYPPHLVTLSYKPKAGMLPKDRIALVGKGIVYD TGGLAIKPRDGMCTMKHDMGGAAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRND DILRMKSGVTVEVNNTDAEGRLVLSDGVYHACKELSYTPSIIVDMATLTGAQGVATGQHH AAIYANSEASENRFVAAGKACGDLCFPVVYCPEFHNAEFASAVADCRNSVKSRANAQVSC AGQFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIAQTFAAELL

  • title: Substrate-binding/catalytic site
  • coordinates: K295,D300,K307,D318,D377,E379,R381,L408
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.2570356 SVGPRSQRND0.994unspLmjF.33.2570356 SVGPRSQRND0.994unspLmjF.33.2570356 SVGPRSQRND0.994unspLmjF.33.2570469 SDCRNSVKSR0.992unspLmjF.33.257011 SIRSQSAYEE0.996unspLmjF.33.2570167 SSCRRSFTAK0.99unsp

LmjF.33.2570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India