LmjF.33.2830 | cysteine peptidase, Clan CA, family C51, putative

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_IDPredictionOTHERSPmTPCS_Position
LmjF.33.2830OTHER0.9977600.0015500.000690
No Results

  • Fasta :-

    >LmjF.33.2830 MRKWAGSTELLPREPILRVSDVAADPLPRTSSRTSSRGSFSSHSRERVVQNYRESAAELG FPPAVGAPDAACDDVVVSQSRSHGDTNVQPNDSSKTCGESTRVDDLVIACADPGIASSGA ARCFVLTHDPLLYGILKWSLAVLLLLFLSFIVFGMLYSSIRYGRNCTGTNETVKPLGPCV TPLGTILGVFNGVFGYSNCNDSYVSTELRYINLTVPELNNETGQLTYISKQFYTGLAWQC VEYARRYWMQRGTPQPAYFDSVLGAADVWNLTFVRLLSNASITLPLRRYWNGDRVTDNHQ IPAIGDIIIYPVQDGGFPYGHVAVIANVELSTHGAIYVAEQNWANAVWSSPHHNYTRRIP MFYDMLTSTITLDDSEHQIIGWMRYG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/360 Sequence name : 360 Sequence length : 386 VALUES OF COMPUTED PARAMETERS Coef20 : 4.240 CoefTot : 0.025 ChDiff : -5 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.682 2.965 0.500 0.968 MesoH : 0.594 0.989 -0.014 0.421 MuHd_075 : 42.797 24.101 11.557 9.278 MuHd_095 : 37.664 11.060 7.255 6.684 MuHd_100 : 27.495 5.297 4.990 4.311 MuHd_105 : 17.224 5.335 2.055 2.686 Hmax_075 : 13.300 10.850 1.584 4.737 Hmax_095 : 12.000 5.400 -0.130 4.140 Hmax_100 : 10.800 3.400 -0.486 3.660 Hmax_105 : -6.100 3.850 -3.929 1.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7935 0.2065 DFMC : 0.7657 0.2343
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 386 LmjF.33.2830 MRKWAGSTELLPREPILRVSDVAADPLPRTSSRTSSRGSFSSHSRERVVQNYRESAAELGFPPAVGAPDAACDDVVVSQS 80 RSHGDTNVQPNDSSKTCGESTRVDDLVIACADPGIASSGAARCFVLTHDPLLYGILKWSLAVLLLLFLSFIVFGMLYSSI 160 RYGRNCTGTNETVKPLGPCVTPLGTILGVFNGVFGYSNCNDSYVSTELRYINLTVPELNNETGQLTYISKQFYTGLAWQC 240 VEYARRYWMQRGTPQPAYFDSVLGAADVWNLTFVRLLSNASITLPLRRYWNGDRVTDNHQIPAIGDIIIYPVQDGGFPYG 320 HVAVIANVELSTHGAIYVAEQNWANAVWSSPHHNYTRRIPMFYDMLTSTITLDDSEHQIIGWMRYG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.2830 2 -----MR|KW 0.095 . LmjF.33.2830 3 ----MRK|WA 0.120 . LmjF.33.2830 13 STELLPR|EP 0.072 . LmjF.33.2830 18 PREPILR|VS 0.082 . LmjF.33.2830 29 AADPLPR|TS 0.070 . LmjF.33.2830 33 LPRTSSR|TS 0.137 . LmjF.33.2830 37 SSRTSSR|GS 0.122 . LmjF.33.2830 45 SFSSHSR|ER 0.085 . LmjF.33.2830 47 SSHSRER|VV 0.152 . LmjF.33.2830 53 RVVQNYR|ES 0.084 . LmjF.33.2830 81 VVVSQSR|SH 0.132 . LmjF.33.2830 95 QPNDSSK|TC 0.082 . LmjF.33.2830 102 TCGESTR|VD 0.094 . LmjF.33.2830 122 ASSGAAR|CF 0.089 . LmjF.33.2830 137 LLYGILK|WS 0.062 . LmjF.33.2830 161 MLYSSIR|YG 0.093 . LmjF.33.2830 164 SSIRYGR|NC 0.280 . LmjF.33.2830 174 GTNETVK|PL 0.079 . LmjF.33.2830 209 YVSTELR|YI 0.096 . LmjF.33.2830 230 QLTYISK|QF 0.073 . LmjF.33.2830 245 QCVEYAR|RY 0.094 . LmjF.33.2830 246 CVEYARR|YW 0.148 . LmjF.33.2830 251 RRYWMQR|GT 0.100 . LmjF.33.2830 275 WNLTFVR|LL 0.082 . LmjF.33.2830 287 SITLPLR|RY 0.074 . LmjF.33.2830 288 ITLPLRR|YW 0.142 . LmjF.33.2830 294 RYWNGDR|VT 0.076 . LmjF.33.2830 357 PHHNYTR|RI 0.089 . LmjF.33.2830 358 HHNYTRR|IP 0.130 . LmjF.33.2830 384 QIIGWMR|YG 0.100 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.2830 ATGCGAAAATGGGCGGGGTCAACTGAGTTGCTGCCAAGGGAGCCGATCCTGCGAGTCAGC GACGTGGCTGCCGATCCTCTTCCGAGGACGTCCTCACGCACGTCCTCACGCGGCTCCTTC TCATCTCACAGCCGCGAGAGAGTGGTGCAAAACTACCGAGAAAGCGCTGCGGAGTTGGGG TTTCCACCAGCCGTGGGCGCCCCCGATGCTGCATGTGACGATGTCGTCGTCTCCCAGTCT CGCAGCCATGGCGACACCAACGTGCAACCCAACGACTCTAGCAAGACCTGCGGTGAAAGC ACCCGGGTCGACGATCTCGTTATTGCGTGCGCCGACCCGGGCATCGCTAGCTCCGGCGCT GCGCGCTGCTTTGTACTGACACACGATCCGCTGCTTTACGGCATTCTCAAGTGGAGTCTG GCGGTGTTATTGCTTCTTTTCCTCTCTTTCATTGTCTTTGGCATGTTATACAGCTCCATC CGCTACGGCAGGAACTGCACCGGCACCAATGAGACAGTGAAGCCACTCGGACCGTGCGTC ACGCCGCTTGGCACCATCCTCGGCGTCTTCAACGGCGTCTTTGGCTACAGCAACTGCAAT GACAGCTACGTGTCGACCGAGCTGAGGTACATCAACCTGACGGTTCCGGAGCTGAACAAT GAGACAGGGCAGCTAACCTACATCTCTAAGCAGTTCTACACGGGGCTGGCGTGGCAGTGC GTTGAATACGCGCGGCGATACTGGATGCAGCGCGGAACCCCGCAGCCCGCGTACTTCGAT TCCGTTCTAGGAGCCGCGGACGTTTGGAACCTGACTTTTGTGAGGCTCCTGTCGAATGCA TCGATAACGCTGCCGCTGCGCAGGTATTGGAACGGCGACCGCGTGACGGACAACCACCAG ATACCCGCCATCGGCGATATCATCATCTACCCCGTCCAAGATGGCGGCTTTCCCTACGGC CACGTCGCCGTCATCGCGAATGTGGAACTGTCGACGCACGGCGCCATCTACGTGGCTGAA CAAAACTGGGCTAACGCCGTGTGGTCATCGCCGCACCACAACTACACCAGAAGGATTCCT ATGTTCTACGACATGCTGACCTCCACCATCACGCTTGATGATTCAGAACATCAAATCATC GGGTGGATGCGCTACGGCTGA
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  • Fasta :-

    MRKWAGSTELLPREPILRVSDVAADPLPRTSSRTSSRGSFSSHSRERVVQNYRESAAELG FPPAVGAPDAACDDVVVSQSRSHGDTNVQPNDSSKTCGESTRVDDLVIACADPGIASSGA ARCFVLTHDPLLYGILKWSLAVLLLLFLSFIVFGMLYSSIRYGRNCTGTNETVKPLGPCV TPLGTILGVFNGVFGYSNCNDSYVSTELRYINLTVPELNNETGQLTYISKQFYTGLAWQC VEYARRYWMQRGTPQPAYFDSVLGAADVWNLTFVRLLSNASITLPLRRYWNGDRVTDNHQ IPAIGDIIIYPVQDGGFPYGHVAVIANVELSTHGAIYVAEQNWANAVWSSPHHNYTRRIP MFYDMLTSTITLDDSEHQIIGWMRYG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.283039 SSSRGSFSSH0.996unspLmjF.33.283039 SSSRGSFSSH0.996unspLmjF.33.283039 SSSRGSFSSH0.996unspLmjF.33.283044 SFSSHSRERV0.993unspLmjF.33.283082 SSQSRSHGDT0.99unspLmjF.33.283031 SLPRTSSRTS0.99unspLmjF.33.283035 SSSRTSSRGS0.998unsp

LmjF.33.2830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India