LmjF.33.2850 | cysteine peptidase, Clan CA, family C51, putative

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_IDPredictionOTHERSPmTPCS_Position
LmjF.33.2850OTHER0.8794610.1184050.002134
No Results

  • Fasta :-

    >LmjF.33.2850 MQNKQPSTLLASFFAYYHFLIPMRSRRSPAGDIEDRADVAAATVLHSSSSSSSAAAAASM MQDQVLRCVRKEPGPSNAAICDAYAMRLLQEATEEERCRGPHWRARCSPSILVALLIWAT IGLVVYMKVDSSHLRPGAALATTSVETPLSQLPESCRGHYCLQEGGKEPFGAVLGAHNGV FAYSNCNSDTCISSLQYQMAIPLPPGARTALDAPHATTRLMTTGMKWQCVEYARRYWMLR GTPTPAFFGAVKGAADIWDSLTHVTFLDNATTAPLLKFKNGARLGYGGSAPRVGDLLIYP RDTENVFPYGHVAVVVKVEMPTKAEADDSYMDAGAASPKPRQRHSHVYVAEQNWDSVTWP NPYHNYSRSLPLVVLESAEGRPLQYTIEDSLHGIQGWVRYDDEP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/297 Sequence name : 297 Sequence length : 404 VALUES OF COMPUTED PARAMETERS Coef20 : 3.864 CoefTot : -0.477 ChDiff : -2 ZoneTo : 31 KR : 4 DE : 0 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.559 0.415 0.899 MesoH : -0.108 0.429 -0.226 0.265 MuHd_075 : 17.533 16.322 5.307 4.271 MuHd_095 : 13.757 9.172 3.155 3.974 MuHd_100 : 13.670 11.970 4.947 4.615 MuHd_105 : 13.388 11.741 5.074 3.998 Hmax_075 : 3.383 12.250 1.176 3.173 Hmax_095 : 10.200 10.763 0.539 5.232 Hmax_100 : 15.200 15.800 2.430 6.380 Hmax_105 : 6.400 15.600 2.566 6.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9737 0.0263 DFMC : 0.9572 0.0428
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 404 LmjF.33.2850 MQNKQPSTLLASFFAYYHFLIPMRSRRSPAGDIEDRADVAAATVLHSSSSSSSAAAAASMMQDQVLRCVRKEPGPSNAAI 80 CDAYAMRLLQEATEEERCRGPHWRARCSPSILVALLIWATIGLVVYMKVDSSHLRPGAALATTSVETPLSQLPESCRGHY 160 CLQEGGKEPFGAVLGAHNGVFAYSNCNSDTCISSLQYQMAIPLPPGARTALDAPHATTRLMTTGMKWQCVEYARRYWMLR 240 GTPTPAFFGAVKGAADIWDSLTHVTFLDNATTAPLLKFKNGARLGYGGSAPRVGDLLIYPRDTENVFPYGHVAVVVKVEM 320 PTKAEADDSYMDAGAASPKPRQRHSHVYVAEQNWDSVTWPNPYHNYSRSLPLVVLESAEGRPLQYTIEDSLHGIQGWVRY 400 DDEP 480 ..........................P..................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.33.2850 4 ---MQNK|QP 0.073 . LmjF.33.2850 24 HFLIPMR|SR 0.087 . LmjF.33.2850 26 LIPMRSR|RS 0.076 . LmjF.33.2850 27 IPMRSRR|SP 0.663 *ProP* LmjF.33.2850 36 AGDIEDR|AD 0.076 . LmjF.33.2850 67 MQDQVLR|CV 0.119 . LmjF.33.2850 70 QVLRCVR|KE 0.105 . LmjF.33.2850 71 VLRCVRK|EP 0.108 . LmjF.33.2850 87 CDAYAMR|LL 0.094 . LmjF.33.2850 97 EATEEER|CR 0.077 . LmjF.33.2850 99 TEEERCR|GP 0.094 . LmjF.33.2850 104 CRGPHWR|AR 0.092 . LmjF.33.2850 106 GPHWRAR|CS 0.152 . LmjF.33.2850 128 GLVVYMK|VD 0.065 . LmjF.33.2850 135 VDSSHLR|PG 0.095 . LmjF.33.2850 157 QLPESCR|GH 0.084 . LmjF.33.2850 167 CLQEGGK|EP 0.063 . LmjF.33.2850 208 PLPPGAR|TA 0.105 . LmjF.33.2850 219 APHATTR|LM 0.118 . LmjF.33.2850 226 LMTTGMK|WQ 0.056 . LmjF.33.2850 234 QCVEYAR|RY 0.084 . LmjF.33.2850 235 CVEYARR|YW 0.109 . LmjF.33.2850 240 RRYWMLR|GT 0.098 . LmjF.33.2850 252 AFFGAVK|GA 0.075 . LmjF.33.2850 277 TTAPLLK|FK 0.070 . LmjF.33.2850 279 APLLKFK|NG 0.061 . LmjF.33.2850 283 KFKNGAR|LG 0.072 . LmjF.33.2850 292 YGGSAPR|VG 0.065 . LmjF.33.2850 301 DLLIYPR|DT 0.116 . LmjF.33.2850 317 HVAVVVK|VE 0.060 . LmjF.33.2850 323 KVEMPTK|AE 0.058 . LmjF.33.2850 339 AGAASPK|PR 0.064 . LmjF.33.2850 341 AASPKPR|QR 0.130 . LmjF.33.2850 343 SPKPRQR|HS 0.123 . LmjF.33.2850 368 PYHNYSR|SL 0.112 . LmjF.33.2850 381 LESAEGR|PL 0.104 . LmjF.33.2850 399 GIQGWVR|YD 0.090 . ____________________________^_________________

  • Fasta :-

    >LmjF.33.2850 ATGCAGAACAAGCAACCATCCACGCTGCTCGCCTCATTTTTTGCTTACTACCACTTTCTC ATTCCCATGCGTAGCCGCCGGTCGCCAGCTGGCGATATCGAAGATCGTGCCGACGTCGCC GCTGCTACAGTTCTCCACTCCTCGTCGTCATCTTCGTCAGCGGCGGCGGCGGCGTCCATG ATGCAGGACCAGGTCTTACGCTGTGTGCGAAAGGAGCCGGGCCCAAGCAATGCAGCGATA TGCGATGCGTACGCGATGAGGCTTCTACAGGAAGCGACGGAGGAGGAGCGGTGCCGCGGG CCGCACTGGCGTGCGCGCTGTTCCCCTAGCATTCTTGTTGCCCTGCTCATATGGGCGACG ATCGGCCTTGTCGTGTACATGAAGGTGGACAGCTCACATTTGCGTCCTGGTGCCGCCCTT GCGACCACTTCTGTTGAGACACCCCTCTCGCAACTCCCTGAAAGCTGTCGTGGCCATTAC TGTCTGCAAGAGGGCGGAAAGGAGCCCTTTGGAGCGGTCCTCGGGGCCCACAATGGCGTC TTCGCCTACAGTAACTGCAACAGCGACACCTGCATCTCTTCTCTACAGTACCAGATGGCG ATTCCGCTCCCACCAGGGGCGCGGACGGCTCTGGACGCCCCCCACGCGACGACTCGCCTC ATGACAACAGGGATGAAGTGGCAGTGCGTCGAATACGCCCGTCGGTACTGGATGCTGCGC GGCACCCCGACCCCCGCGTTCTTCGGCGCTGTTAAAGGCGCCGCAGATATTTGGGACTCT CTCACTCACGTTACCTTCCTCGACAACGCGACTACGGCTCCGCTGCTGAAGTTTAAGAAT GGCGCGAGGCTTGGCTACGGCGGCAGCGCACCCCGCGTCGGAGACCTACTCATCTACCCT CGCGATACCGAGAACGTTTTCCCCTACGGCCATGTCGCCGTGGTGGTCAAGGTGGAGATG CCCACGAAGGCCGAGGCGGACGACTCCTACATGGACGCCGGAGCCGCATCGCCAAAGCCG CGTCAGCGGCACAGCCACGTGTACGTGGCAGAGCAAAACTGGGATAGCGTGACTTGGCCG AATCCATACCATAACTACTCACGTTCACTGCCGCTGGTGGTGCTTGAATCAGCGGAGGGG CGGCCTCTGCAGTACACGATCGAGGATTCGCTCCATGGCATCCAGGGCTGGGTGCGTTAC GATGACGAGCCATAG
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  • Fasta :-

    MQNKQPSTLLASFFAYYHFLIPMRSRRSPAGDIEDRADVAAATVLHSSSSSSSAAAAASM MQDQVLRCVRKEPGPSNAAICDAYAMRLLQEATEEERCRGPHWRARCSPSILVALLIWAT IGLVVYMKVDSSHLRPGAALATTSVETPLSQLPESCRGHYCLQEGGKEPFGAVLGAHNGV FAYSNCNSDTCISSLQYQMAIPLPPGARTALDAPHATTRLMTTGMKWQCVEYARRYWMLR GTPTPAFFGAVKGAADIWDSLTHVTFLDNATTAPLLKFKNGARLGYGGSAPRVGDLLIYP RDTENVFPYGHVAVVVKVEMPTKAEADDSYMDAGAASPKPRQRHSHVYVAEQNWDSVTWP NPYHNYSRSLPLVVLESAEGRPLQYTIEDSLHGIQGWVRYDDEP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.33.285028 SRSRRSPAGD0.996unspLmjF.33.2850329 SEADDSYMDA0.994unsp

LmjF.33.2850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India