LmjF.34.2000 | pyroglutamyl-peptidase I (C15 family)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:  GO:0016920      

  • Curated_GO_Functions:  pyroglutamyl-peptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.34.2000OTHER0.9975110.0001960.002293
No Results

  • Fasta :-

    >LmjF.34.2000 MSSALKGNHPPPSLPNDHRTRAPHDQCLTIASGLLRAHRAPRSSAPLKMLHSKAGIVVFI TGYGPFATVKVNPSSDIALRVAEGLKRHPDVAEVRYTELDVSVTSVAAYFEKVERDTADI IAEHGAGQVKILLCHLGVHNDTTGLICVEVQGCNELFSSVPDVDGKVLNHEPIVPEDGAI EVFHESWFGKEGSPQLEKLERLIQQVNDTVAESWHHWVTGAVTNNEVTSADTDRKDMAMP TFQAPSSAISRNAGRYLCNCALYHALRLQEKNPGVVYGIFVHVVDPIRGKTEIEGGPIVA YNPPTIVQSVQVQCLMHGLLSLMTM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/501 Sequence name : 501 Sequence length : 325 VALUES OF COMPUTED PARAMETERS Coef20 : 2.984 CoefTot : -1.161 ChDiff : -8 ZoneTo : 16 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.400 0.143 0.614 MesoH : -0.464 0.345 -0.328 0.234 MuHd_075 : 16.275 14.343 3.907 3.765 MuHd_095 : 12.743 3.201 3.960 2.198 MuHd_100 : 16.603 7.197 4.047 3.643 MuHd_105 : 15.861 10.313 3.966 4.304 Hmax_075 : 6.533 3.617 -1.841 3.127 Hmax_095 : 2.600 -2.000 -2.160 1.860 Hmax_100 : 2.600 -0.800 -2.160 1.940 Hmax_105 : 0.800 -0.817 -2.127 1.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9784 0.0216 DFMC : 0.9607 0.0393
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 325 LmjF.34.2000 MSSALKGNHPPPSLPNDHRTRAPHDQCLTIASGLLRAHRAPRSSAPLKMLHSKAGIVVFITGYGPFATVKVNPSSDIALR 80 VAEGLKRHPDVAEVRYTELDVSVTSVAAYFEKVERDTADIIAEHGAGQVKILLCHLGVHNDTTGLICVEVQGCNELFSSV 160 PDVDGKVLNHEPIVPEDGAIEVFHESWFGKEGSPQLEKLERLIQQVNDTVAESWHHWVTGAVTNNEVTSADTDRKDMAMP 240 TFQAPSSAISRNAGRYLCNCALYHALRLQEKNPGVVYGIFVHVVDPIRGKTEIEGGPIVAYNPPTIVQSVQVQCLMHGLL 320 SLMTM 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.34.2000 6 -MSSALK|GN 0.065 . LmjF.34.2000 19 SLPNDHR|TR 0.083 . LmjF.34.2000 21 PNDHRTR|AP 0.112 . LmjF.34.2000 36 IASGLLR|AH 0.097 . LmjF.34.2000 39 GLLRAHR|AP 0.172 . LmjF.34.2000 42 RAHRAPR|SS 0.492 . LmjF.34.2000 48 RSSAPLK|ML 0.086 . LmjF.34.2000 53 LKMLHSK|AG 0.077 . LmjF.34.2000 70 GPFATVK|VN 0.060 . LmjF.34.2000 80 SSDIALR|VA 0.106 . LmjF.34.2000 86 RVAEGLK|RH 0.054 . LmjF.34.2000 87 VAEGLKR|HP 0.150 . LmjF.34.2000 95 PDVAEVR|YT 0.090 . LmjF.34.2000 112 VAAYFEK|VE 0.062 . LmjF.34.2000 115 YFEKVER|DT 0.126 . LmjF.34.2000 130 HGAGQVK|IL 0.066 . LmjF.34.2000 166 VPDVDGK|VL 0.062 . LmjF.34.2000 190 HESWFGK|EG 0.101 . LmjF.34.2000 198 GSPQLEK|LE 0.056 . LmjF.34.2000 201 QLEKLER|LI 0.119 . LmjF.34.2000 234 TSADTDR|KD 0.107 . LmjF.34.2000 235 SADTDRK|DM 0.081 . LmjF.34.2000 251 PSSAISR|NA 0.149 . LmjF.34.2000 255 ISRNAGR|YL 0.110 . LmjF.34.2000 267 ALYHALR|LQ 0.093 . LmjF.34.2000 271 ALRLQEK|NP 0.072 . LmjF.34.2000 288 HVVDPIR|GK 0.099 . LmjF.34.2000 290 VDPIRGK|TE 0.064 . ____________________________^_________________

  • Fasta :-

    >LmjF.34.2000 GAGCATCTTCATGAAATCATCATCAACCGAACAACGCAACAAGGAAGGCGCCGCATGGAA ATCGCGTAACGTGGTCAAGTGTGTGCGGCGGCGCCGGCGTCGACGGCGACGCAGTGCAGG AGACAGCTTGCCGTCGCAGGGGAGATCACCAAGGACGAGGGTGGGAAAGTAATAACAAAA GCAAAAACGGTTTGCTAATTTTCTGATGTTGGCGCACGTATGTTCTCGAATCGAGCGTGT GCAAGACTTCGTCGCAAGCGTCGTTACCTAGCTGAGGGTGCGGTTTCCGCTCTTTTCAGT GGAACTGCGGCAGCTTGTCCTGCTACTAGTGCTGCTACTCGCCTACTTGCCTCGATGAAC TGTACGTTTGTGGTTTTATGCGCGTTCTCCGTAGCTGCGTAGAACTCGATCGTGTTGCTG CGAACGCGGACACGGAGGCGCAACCGTAAAACACCTCTATTGCAATGAAGATCATGTGAG TAGTGTGCGGATGGTCGTGGCAGCCTATACCCTTGCCATCGTGTGAACCGAACAGAGAAA ACGGTGGTGCACTGTCTCTTACTATGCCGCCTCTGTCACTGCGACTGGCCCGCGCATTTC GCCTTTGCGCACCTCTCATAGTCCCTCTGGAAGAGCGCCTCTTCGTAGGCTTTTGCGCGC CCGAGCACTTTTCTGAAGAACTATGTCCTCAGCACTGAAAGGGAATCATCCTCCACCTTC CCTCCCCAACGACCACCGCACACGTGCACCGCACGATCAATGTCTCACTATTGCAAGCGG CCTTCTACGAGCACACAGGGCTCCTCGCAGTTCCGCACCGCTTAAAATGCTGCACTCCAA GGCGGGCATCGTCGTGTTCATCACGGGCTACGGGCCCTTCGCCACTGTGAAGGTGAACCC CAGCTCCGACATTGCCCTTCGTGTCGCGGAGGGCCTGAAGCGCCACCCCGACGTCGCGGA GGTGCGCTACACGGAGCTGGATGTCAGCGTGACCAGCGTCGCAGCGTACTTTGAGAAGGT GGAAAGGGACACTGCCGACATCATCGCCGAACACGGCGCCGGCCAGGTGAAGATCCTTCT CTGCCACCTAGGTGTTCACAATGACACAACGGGGCTCATCTGCGTTGAGGTGCAGGGCTG CAACGAGCTCTTTTCTAGCGTCCCTGACGTGGACGGTAAGGTGCTCAACCACGAGCCCAT TGTACCGGAGGACGGCGCCATTGAAGTATTTCACGAGAGCTGGTTCGGCAAGGAGGGCTC GCCGCAGCTCGAGAAGCTGGAGCGCTTGATTCAACAGGTAAACGACACCGTTGCCGAGTC ATGGCATCACTGGGTGACGGGTGCCGTGACCAACAATGAGGTGACATCGGCGGACACAGA CAGAAAGGACATGGCGATGCCAACGTTTCAGGCGCCGAGCTCTGCAATTTCGCGCAACGC AGGGCGCTACCTGTGCAACTGCGCCCTCTACCACGCACTTCGACTTCAGGAAAAGAACCC GGGTGTCGTCTATGGCATCTTCGTTCACGTTGTCGATCCGATTCGCGGCAAGACGGAGAT CGAGGGCGGTCCCATTGTGGCTTACAACCCACCGACGATCGTACAGTCGGTGCAAGTGCA GTGTCTCATGCACGGCCTGCTGTCTTTGATGACCATGTGA
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  • Fasta :-

    MSSALKGNHPPPSLPNDHRTRAPHDQCLTIASGLLRAHRAPRSSAPLKMLHSKAGIVVFI TGYGPFATVKVNPSSDIALRVAEGLKRHPDVAEVRYTELDVSVTSVAAYFEKVERDTADI IAEHGAGQVKILLCHLGVHNDTTGLICVEVQGCNELFSSVPDVDGKVLNHEPIVPEDGAI EVFHESWFGKEGSPQLEKLERLIQQVNDTVAESWHHWVTGAVTNNEVTSADTDRKDMAMP TFQAPSSAISRNAGRYLCNCALYHALRLQEKNPGVVYGIFVHVVDPIRGKTEIEGGPIVA YNPPTIVQSVQVQCLMHGLLSLMTM

  • title: catalytic triad
  • coordinates: E149,C258,H282
No Results
No Results
No Results

LmjF.34.2000      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India