LmjF.34.2810 | Carboxypeptidase-like protein

UniProt_ID: Q4Q2R3

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004181 GO:0008270
Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs: GO:0005737 GO:0005829
Curated_GO_Components: cytoplasm cytosol
Curated_GO_Function_IDs: GO:0043531 GO:0005524 GO:0004181 GO:0008270
Curated_GO_Functions: ADP binding ATP binding metallocarboxypeptidase activity zinc ion binding
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LmjF.34.2810	OTHER	0.999739	0.000104	0.000157

No Results

Fasta :-
>LmjF.34.2810 MGLGFSGCSPQSSPKQAASQRTSIDGHRDASRCISNSTKLKSMNGLDRDASLHGADDAAR GAASQTAAGPEVDDAHWVFQRPPNNQRTFYFQEDDLEFSSQFDSGNLIQVERVGTFQYRM YTAMDCGNAPWQTNNRQWFHFSVRGGSKGVVVTICFVGMAHSNMFTYDWMPVMAVVPTRP QYTRIAGKAHVEALEKMPETPGYPLLVHKPVSKDDADSDGGGDEGDNDADAGAAGANNNG GTGGIAFSISPTGKSSGTSKKKKTKKKNIAMNLTFDFKIETKIAVTYTPPQGRPDSPAIY IASNHPYTYYTLQRNLAMWQEAARRSNAVREMSLQAPDHQVQRSSSEQRSGPDSYAVHGL ATAQPGSNGRSKKGVGSSNTGNAAVPCSAEFSEVYFHREVLCKSLEGRDVTLLTISDCSR MTVERAPLLSKEAGLPHSSALGFTQRPYAFSGKQYVVLTARVHPGECPGSHLMHGCIDLL MNCTDYRAAALRHNFVFCVVPMLNPDGVVRGHSRVDSNGVDLNRMYRDPSRKRHPAPYAV RALLRSLGSRVALFIDMHAHANKRGTFFYGNSMDWANQIENLLYAKLVSLNTPYFDFRSC NFSEANMFAVSKSGKRKDSSSRVVAFTEAGIVHSYTIETSHVMADALNPVAPLTNNQADQ LDAALSSPPSVMHSPATFRDTARAMLLGLLDLKGMNPTSRLPLTQFHSTRGLALWLQRQL QIESAETLFAQAFKLHGKEAQASTSESANTLLATIMKSMAAEEYPEKITIKEARLLPRTT FSGVRSFVPLDTAIVLLSQTAPTGPPRSLLYSSGNCGAASGAATAGGAGSKGGGSAQRRG TSPSFGWNSCPTAIPPAVIATRRRSKPILLPSDTTVET
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/228 Sequence name : 228 Sequence length : 878 VALUES OF COMPUTED PARAMETERS Coef20 : 3.393 CoefTot : -0.623 ChDiff : 17 ZoneTo : 24 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 1.529 0.176 0.585 MesoH : 0.150 0.257 -0.139 0.212 MuHd_075 : 31.880 19.231 10.818 6.096 MuHd_095 : 15.096 6.005 3.189 2.828 MuHd_100 : 10.981 4.488 2.114 2.789 MuHd_105 : 12.191 5.737 1.682 2.433 Hmax_075 : 8.200 7.117 2.639 1.925 Hmax_095 : 9.887 3.000 0.399 2.940 Hmax_100 : 7.200 3.000 0.296 2.880 Hmax_105 : 2.600 1.867 -1.982 2.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9681 0.0319 DFMC : 0.8890 0.1110

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 878 LmjF.34.2810 MGLGFSGCSPQSSPKQAASQRTSIDGHRDASRCISNSTKLKSMNGLDRDASLHGADDAARGAASQTAAGPEVDDAHWVFQ 80 RPPNNQRTFYFQEDDLEFSSQFDSGNLIQVERVGTFQYRMYTAMDCGNAPWQTNNRQWFHFSVRGGSKGVVVTICFVGMA 160 HSNMFTYDWMPVMAVVPTRPQYTRIAGKAHVEALEKMPETPGYPLLVHKPVSKDDADSDGGGDEGDNDADAGAAGANNNG 240 GTGGIAFSISPTGKSSGTSKKKKTKKKNIAMNLTFDFKIETKIAVTYTPPQGRPDSPAIYIASNHPYTYYTLQRNLAMWQ 320 EAARRSNAVREMSLQAPDHQVQRSSSEQRSGPDSYAVHGLATAQPGSNGRSKKGVGSSNTGNAAVPCSAEFSEVYFHREV 400 LCKSLEGRDVTLLTISDCSRMTVERAPLLSKEAGLPHSSALGFTQRPYAFSGKQYVVLTARVHPGECPGSHLMHGCIDLL 480 MNCTDYRAAALRHNFVFCVVPMLNPDGVVRGHSRVDSNGVDLNRMYRDPSRKRHPAPYAVRALLRSLGSRVALFIDMHAH 560 ANKRGTFFYGNSMDWANQIENLLYAKLVSLNTPYFDFRSCNFSEANMFAVSKSGKRKDSSSRVVAFTEAGIVHSYTIETS 640 HVMADALNPVAPLTNNQADQLDAALSSPPSVMHSPATFRDTARAMLLGLLDLKGMNPTSRLPLTQFHSTRGLALWLQRQL 720 QIESAETLFAQAFKLHGKEAQASTSESANTLLATIMKSMAAEEYPEKITIKEARLLPRTTFSGVRSFVPLDTAIVLLSQT 800 APTGPPRSLLYSSGNCGAASGAATAGGAGSKGGGSAQRRGTSPSFGWNSCPTAIPPAVIATRRRSKPILLPSDTTVET 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................P........................... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .............................................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.34.2810 15 SPQSSPK|QA 0.095 . LmjF.34.2810 21 KQAASQR|TS 0.121 . LmjF.34.2810 28 TSIDGHR|DA 0.149 . LmjF.34.2810 32 GHRDASR|CI 0.120 . LmjF.34.2810 39 CISNSTK|LK 0.073 . LmjF.34.2810 41 SNSTKLK|SM 0.098 . LmjF.34.2810 48 SMNGLDR|DA 0.163 . LmjF.34.2810 60 GADDAAR|GA 0.113 . LmjF.34.2810 81 AHWVFQR|PP 0.090 . LmjF.34.2810 87 RPPNNQR|TF 0.096 . LmjF.34.2810 112 NLIQVER|VG 0.078 . LmjF.34.2810 119 VGTFQYR|MY 0.094 . LmjF.34.2810 136 PWQTNNR|QW 0.081 . LmjF.34.2810 144 WFHFSVR|GG 0.128 . LmjF.34.2810 148 SVRGGSK|GV 0.074 . LmjF.34.2810 179 MAVVPTR|PQ 0.101 . LmjF.34.2810 184 TRPQYTR|IA 0.175 . LmjF.34.2810 188 YTRIAGK|AH 0.069 . LmjF.34.2810 196 HVEALEK|MP 0.057 . LmjF.34.2810 209 YPLLVHK|PV 0.084 . LmjF.34.2810 213 VHKPVSK|DD 0.073 . LmjF.34.2810 254 SISPTGK|SS 0.139 . LmjF.34.2810 260 KSSGTSK|KK 0.074 . LmjF.34.2810 261 SSGTSKK|KK 0.131 . LmjF.34.2810 262 SGTSKKK|KT 0.110 . LmjF.34.2810 263 GTSKKKK|TK 0.190 . LmjF.34.2810 265 SKKKKTK|KK 0.079 . LmjF.34.2810 266 KKKKTKK|KN 0.135 . LmjF.34.2810 267 KKKTKKK|NI 0.148 . LmjF.34.2810 278 NLTFDFK|IE 0.059 . LmjF.34.2810 282 DFKIETK|IA 0.062 . LmjF.34.2810 293 YTPPQGR|PD 0.098 . LmjF.34.2810 314 TYYTLQR|NL 0.098 . LmjF.34.2810 324 MWQEAAR|RS 0.104 . LmjF.34.2810 325 WQEAARR|SN 0.181 . LmjF.34.2810 330 RRSNAVR|EM 0.149 . LmjF.34.2810 343 PDHQVQR|SS 0.230 . LmjF.34.2810 349 RSSSEQR|SG 0.178 . LmjF.34.2810 370 QPGSNGR|SK 0.171 . LmjF.34.2810 372 GSNGRSK|KG 0.068 . LmjF.34.2810 373 SNGRSKK|GV 0.788 *ProP* LmjF.34.2810 398 SEVYFHR|EV 0.115 . LmjF.34.2810 403 HREVLCK|SL 0.109 . LmjF.34.2810 408 CKSLEGR|DV 0.181 . LmjF.34.2810 420 TISDCSR|MT 0.091 . LmjF.34.2810 425 SRMTVER|AP 0.089 . LmjF.34.2810 431 RAPLLSK|EA 0.060 . LmjF.34.2810 446 ALGFTQR|PY 0.098 . LmjF.34.2810 453 PYAFSGK|QY 0.061 . LmjF.34.2810 461 YVVLTAR|VH 0.072 . LmjF.34.2810 487 MNCTDYR|AA 0.084 . LmjF.34.2810 492 YRAAALR|HN 0.093 . LmjF.34.2810 510 NPDGVVR|GH 0.104 . LmjF.34.2810 514 VVRGHSR|VD 0.096 . LmjF.34.2810 524 NGVDLNR|MY 0.072 . LmjF.34.2810 527 DLNRMYR|DP 0.385 . LmjF.34.2810 531 MYRDPSR|KR 0.090 . LmjF.34.2810 532 YRDPSRK|RH 0.068 . LmjF.34.2810 533 RDPSRKR|HP 0.126 . LmjF.34.2810 541 PAPYAVR|AL 0.085 . LmjF.34.2810 545 AVRALLR|SL 0.147 . LmjF.34.2810 550 LRSLGSR|VA 0.107 . LmjF.34.2810 563 MHAHANK|RG 0.060 . LmjF.34.2810 564 HAHANKR|GT 0.263 . LmjF.34.2810 586 ENLLYAK|LV 0.070 . LmjF.34.2810 598 TPYFDFR|SC 0.178 . LmjF.34.2810 612 NMFAVSK|SG 0.074 . LmjF.34.2810 615 AVSKSGK|RK 0.073 . LmjF.34.2810 616 VSKSGKR|KD 0.137 . LmjF.34.2810 617 SKSGKRK|DS 0.183 . LmjF.34.2810 622 RKDSSSR|VV 0.115 . LmjF.34.2810 679 HSPATFR|DT 0.108 . LmjF.34.2810 683 TFRDTAR|AM 0.104 . LmjF.34.2810 693 LGLLDLK|GM 0.054 . LmjF.34.2810 700 GMNPTSR|LP 0.099 . LmjF.34.2810 710 TQFHSTR|GL 0.113 . LmjF.34.2810 718 LALWLQR|QL 0.078 . LmjF.34.2810 734 LFAQAFK|LH 0.069 . LmjF.34.2810 738 AFKLHGK|EA 0.072 . LmjF.34.2810 757 LLATIMK|SM 0.087 . LmjF.34.2810 767 AEEYPEK|IT 0.062 . LmjF.34.2810 771 PEKITIK|EA 0.071 . LmjF.34.2810 774 ITIKEAR|LL 0.101 . LmjF.34.2810 778 EARLLPR|TT 0.123 . LmjF.34.2810 785 TTFSGVR|SF 0.103 . LmjF.34.2810 807 APTGPPR|SL 0.115 . LmjF.34.2810 831 AGGAGSK|GG 0.070 . LmjF.34.2810 838 GGGSAQR|RG 0.068 . LmjF.34.2810 839 GGSAQRR|GT 0.362 . LmjF.34.2810 862 PAVIATR|RR 0.077 . LmjF.34.2810 863 AVIATRR|RS 0.118 . LmjF.34.2810 864 VIATRRR|SK 0.234 . LmjF.34.2810 866 ATRRRSK|PI 0.111 . ____________________________^_________________

Fasta :-
>LmjF.34.2810 ATGGGGCTGGGATTCAGCGGCTGCTCCCCGCAAAGTTCGCCTAAGCAGGCCGCTTCGCAG CGGACCTCGATAGATGGTCACCGCGACGCATCTCGATGCATTTCCAACAGCACAAAGTTG AAGTCGATGAACGGGTTGGATCGCGATGCTTCGCTGCACGGCGCTGATGACGCGGCACGC GGCGCTGCAAGCCAGACGGCGGCAGGGCCGGAAGTGGATGATGCGCACTGGGTGTTTCAG AGACCGCCGAACAACCAGCGCACATTCTACTTTCAGGAGGACGATCTCGAGTTCTCGTCG CAGTTCGACAGCGGCAACTTGATTCAGGTGGAGCGGGTGGGCACCTTCCAATACCGCATG TACACGGCAATGGACTGCGGCAACGCGCCATGGCAGACCAACAACCGCCAGTGGTTTCAC TTCTCGGTCCGCGGCGGCAGCAAGGGCGTCGTCGTCACGATCTGTTTTGTCGGCATGGCA CACAGCAATATGTTCACGTATGATTGGATGCCGGTCATGGCCGTTGTGCCTACGCGACCA CAGTACACTCGCATCGCTGGAAAGGCCCACGTGGAGGCCCTTGAGAAAATGCCAGAGACT CCCGGCTATCCTCTGCTTGTGCACAAGCCCGTGTCGAAGGACGACGCCGACAGTGACGGT GGCGGCGATGAGGGTGACAACGACGCCGATGCCGGCGCTGCTGGTGCCAACAACAACGGG GGCACTGGGGGAATCGCTTTCTCCATCTCACCTACGGGCAAGTCCTCTGGGACCAGCAAG AAGAAAAAAACTAAGAAGAAGAACATCGCTATGAACCTTACCTTTGACTTCAAAATCGAG ACAAAGATCGCGGTAACGTACACGCCGCCGCAGGGGCGTCCAGACTCGCCCGCGATCTAC ATTGCAAGCAACCACCCTTATACCTACTACACACTGCAACGCAACCTTGCGATGTGGCAA GAGGCGGCGCGACGAAGTAACGCTGTGCGGGAGATGAGTCTGCAGGCACCCGATCACCAA GTGCAGCGCTCCAGTTCCGAGCAGCGTAGCGGGCCGGACTCGTACGCCGTACACGGCCTG GCCACAGCTCAGCCTGGAAGCAACGGAAGGAGTAAGAAGGGGGTTGGAAGCTCCAACACC GGCAACGCTGCTGTTCCATGCTCTGCGGAGTTCAGCGAGGTGTATTTCCACCGCGAGGTT CTCTGCAAATCGTTGGAGGGGCGCGACGTTACACTGCTGACAATTAGCGACTGCAGCCGC ATGACGGTAGAACGGGCACCCCTCCTTTCCAAGGAAGCCGGCCTTCCCCACTCCTCGGCG CTCGGCTTCACGCAGCGGCCGTACGCCTTCTCCGGCAAGCAGTACGTGGTGCTGACAGCT CGTGTGCATCCAGGCGAATGCCCAGGCAGCCATCTTATGCACGGCTGTATTGATTTGCTC ATGAACTGCACAGACTATCGAGCGGCGGCGCTGCGGCACAACTTTGTCTTCTGCGTGGTC CCGATGCTGAACCCGGACGGCGTTGTTCGCGGCCACAGCCGCGTCGACTCGAACGGCGTC GATCTCAACCGCATGTACCGGGACCCGTCGCGTAAGCGACACCCCGCACCATACGCGGTT CGCGCCCTTCTGCGGTCTCTGGGCAGCCGCGTGGCGCTTTTCATCGACATGCACGCACAT GCGAATAAGCGGGGCACCTTCTTTTACGGTAACAGCATGGATTGGGCCAACCAGATAGAA AACCTGCTCTACGCAAAGCTGGTCTCGCTTAACACGCCCTATTTCGATTTCCGCAGCTGC AACTTTTCGGAGGCGAACATGTTCGCTGTCAGCAAGTCTGGCAAGCGCAAGGACTCCTCC AGCCGCGTCGTGGCCTTTACCGAGGCCGGTATCGTGCACAGCTACACCATCGAAACCTCG CACGTGATGGCCGACGCACTGAATCCAGTCGCCCCCCTGACGAATAATCAAGCCGACCAG CTGGATGCTGCCCTTTCAAGCCCACCGTCTGTTATGCACTCCCCAGCAACCTTTCGCGAC ACTGCTCGTGCGATGCTGCTGGGACTGCTGGACCTCAAGGGTATGAACCCCACAAGTCGC CTGCCCTTGACACAGTTTCACTCCACCCGCGGACTGGCTCTTTGGCTGCAGCGGCAGCTG CAAATCGAGTCCGCGGAGACGCTTTTTGCGCAGGCCTTCAAGCTGCACGGCAAGGAGGCT CAGGCTTCCACCAGCGAGTCTGCGAACACTCTGCTCGCGACCATCATGAAGAGCATGGCG GCAGAGGAGTATCCCGAGAAGATCACCATCAAGGAGGCGCGATTGCTGCCGCGCACCACC TTCAGCGGTGTTCGGAGCTTTGTGCCACTGGATACGGCCATTGTGCTGCTGTCGCAAACG GCGCCAACGGGGCCGCCGCGCTCGCTTCTGTACAGCAGCGGCAACTGTGGAGCGGCAAGC GGCGCTGCCACTGCCGGGGGAGCCGGCAGCAAAGGCGGCGGCAGCGCTCAGCGCCGTGGC ACGTCTCCCTCCTTTGGTTGGAACAGCTGCCCGACTGCGATCCCGCCGGCGGTGATCGCG ACGCGGCGCCGTTCGAAGCCCATTCTTCTCCCCAGTGACACAACTGTCGAAACGTAG
Download Fasta

Fasta :-

MGLGFSGCSPQSSPKQAASQRTSIDGHRDASRCISNSTKLKSMNGLDRDASLHGADDAAR GAASQTAAGPEVDDAHWVFQRPPNNQRTFYFQEDDLEFSSQFDSGNLIQVERVGTFQYRM YTAMDCGNAPWQTNNRQWFHFSVRGGSKGVVVTICFVGMAHSNMFTYDWMPVMAVVPTRP QYTRIAGKAHVEALEKMPETPGYPLLVHKPVSKDDADSDGGGDEGDNDADAGAAGANNNG GTGGIAFSISPTGKSSGTSKKKKTKKKNIAMNLTFDFKIETKIAVTYTPPQGRPDSPAIY IASNHPYTYYTLQRNLAMWQEAARRSNAVREMSLQAPDHQVQRSSSEQRSGPDSYAVHGL ATAQPGSNGRSKKGVGSSNTGNAAVPCSAEFSEVYFHREVLCKSLEGRDVTLLTISDCSR MTVERAPLLSKEAGLPHSSALGFTQRPYAFSGKQYVVLTARVHPGECPGSHLMHGCIDLL MNCTDYRAAALRHNFVFCVVPMLNPDGVVRGHSRVDSNGVDLNRMYRDPSRKRHPAPYAV RALLRSLGSRVALFIDMHAHANKRGTFFYGNSMDWANQIENLLYAKLVSLNTPYFDFRSC NFSEANMFAVSKSGKRKDSSSRVVAFTEAGIVHSYTIETSHVMADALNPVAPLTNNQADQ LDAALSSPPSVMHSPATFRDTARAMLLGLLDLKGMNPTSRLPLTQFHSTRGLALWLQRQL QIESAETLFAQAFKLHGKEAQASTSESANTLLATIMKSMAAEEYPEKITIKEARLLPRTT FSGVRSFVPLDTAIVLLSQTAPTGPPRSLLYSSGNCGAASGAATAGGAGSKGGGSAQRRG TSPSFGWNSCPTAIPPAVIATRRRSKPILLPSDTTVET

ECOD

title: Zn binding site
coordinates: H463,E466,H558

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	LmjF.34.2810	212 S	HKPVSKDDA	0.997	unsp	LmjF.34.2810	212 S	HKPVSKDDA	0.997	unsp	LmjF.34.2810	212 S	HKPVSKDDA	0.997	unsp	LmjF.34.2810	218 S	DDADSDGGG	0.994	unsp	LmjF.34.2810	259 S	SSGTSKKKK	0.995	unsp	LmjF.34.2810	344 S	QVQRSSSEQ	0.991	unsp	LmjF.34.2810	350 S	SEQRSGPDS	0.996	unsp	LmjF.34.2810	513 S	VRGHSRVDS	0.995	unsp	LmjF.34.2810	530 S	YRDPSRKRH	0.998	unsp	LmjF.34.2810	613 S	AVSKSGKRK	0.995	unsp	LmjF.34.2810	619 S	KRKDSSSRV	0.995	unsp	LmjF.34.2810	743 S	EAQASTSES	0.994	unsp	LmjF.34.2810	13 S	SPQSSPKQA	0.991	unsp	LmjF.34.2810	23 S	SQRTSIDGH	0.994	unsp

LmjF.34.2810 | Carboxypeptidase-like protein

ID's

UniProt_ID: Q4Q2R3

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004181 GO:0008270

Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs: GO:0005737 GO:0005829

Curated_GO_Components: cytoplasm cytosol

Curated_GO_Function_IDs: GO:0043531 GO:0005524 GO:0004181 GO:0008270

Curated_GO_Functions: ADP binding ATP binding metallocarboxypeptidase activity zinc ion binding

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

ECOD

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

LmjF.34.2810

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India