LmjF.36.2420 | serine peptidase, Clan SC, Family S9B

_IDPredictionOTHERSPmTPCS_Position
LmjF.36.2420OTHER0.9986030.0001160.001281
No Results

  • Fasta :-

    >LmjF.36.2420 MPPTALKSSMNELSRYMDAFTSAAGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAV RVIASDEQEVGEEKQFTKEEEMLRERTRSQTTGIANFHVRCNDGAIFYTSGVEVYVYYQN GPRAGKAPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSFDEAHPSTHTVMTFVNNNNVY KATLTESPASEEAPLAVTVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY IDSSHMRSVALLSSLGSPEVPEAEPACPTYATEMEEMPYSRVGDPNARTTLIVYDTATKK MRLLPDVAIRKVAPWTEYILRFGFKDAETLYVSVASRAQEDYAVMSCPIAALPTIAKEED LRSLYSEKDGKVTANIIGDAAAPELRVEWKQRIDFAWVECQPGVPVHYGKVYDVLCRHAA ETETAHYHLYARPAGDGNPETWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS VPLSLESAPHIADALTRLTPLDEHVYSYCAKGDHLYYVSSTAAAPAKLYVSCVSAPQKRA EVTVPSWIATTPGTDPATTADPTRYFGGLPVVTPQIVTVTNRRGVPLSAAVFVSPSAPKD APGPLALFIYGGPHAQLVFENDYETRCKAPVQVLLQHGISVAVVDNQMSNANGLRDLSIC KKNFGNFETHDYVDVTQYLCNTPESESGSPANFRFDAKRVAIFGWSYGGYATLLAMCQAA DVFRIGFAGAPVGDWKLYDTGYTERYMGALYGEDGSAESGASRNRNEAYMTSAISHYAGG FPEECNRLYIAHGLLDENVHFGHSCHVVKALVDNAKPYSMLVYPGERHGLRQNRQSRLHH DALLVKTLEEQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/735 Sequence name : 735 Sequence length : 852 VALUES OF COMPUTED PARAMETERS Coef20 : 3.962 CoefTot : -0.266 ChDiff : -25 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.676 1.247 0.236 0.644 MesoH : 0.028 0.377 -0.211 0.265 MuHd_075 : 13.349 8.012 5.163 0.656 MuHd_095 : 39.679 23.186 9.720 8.317 MuHd_100 : 35.392 20.317 8.998 7.741 MuHd_105 : 29.660 16.555 7.466 6.375 Hmax_075 : -0.583 4.783 -1.990 0.550 Hmax_095 : 15.575 11.113 1.182 4.095 Hmax_100 : 12.600 7.700 0.693 3.680 Hmax_105 : 13.417 9.917 0.795 4.503 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6042 0.3958 DFMC : 0.5782 0.4218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 852 LmjF.36.2420 MPPTALKSSMNELSRYMDAFTSAAGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAVRVIASDEQEVGEEKQFTKEE 80 EMLRERTRSQTTGIANFHVRCNDGAIFYTSGVEVYVYYQNGPRAGKAPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSF 160 DEAHPSTHTVMTFVNNNNVYKATLTESPASEEAPLAVTVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY 240 IDSSHMRSVALLSSLGSPEVPEAEPACPTYATEMEEMPYSRVGDPNARTTLIVYDTATKKMRLLPDVAIRKVAPWTEYIL 320 RFGFKDAETLYVSVASRAQEDYAVMSCPIAALPTIAKEEDLRSLYSEKDGKVTANIIGDAAAPELRVEWKQRIDFAWVEC 400 QPGVPVHYGKVYDVLCRHAAETETAHYHLYARPAGDGNPETWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS 480 VPLSLESAPHIADALTRLTPLDEHVYSYCAKGDHLYYVSSTAAAPAKLYVSCVSAPQKRAEVTVPSWIATTPGTDPATTA 560 DPTRYFGGLPVVTPQIVTVTNRRGVPLSAAVFVSPSAPKDAPGPLALFIYGGPHAQLVFENDYETRCKAPVQVLLQHGIS 640 VAVVDNQMSNANGLRDLSICKKNFGNFETHDYVDVTQYLCNTPESESGSPANFRFDAKRVAIFGWSYGGYATLLAMCQAA 720 DVFRIGFAGAPVGDWKLYDTGYTERYMGALYGEDGSAESGASRNRNEAYMTSAISHYAGGFPEECNRLYIAHGLLDENVH 800 FGHSCHVVKALVDNAKPYSMLVYPGERHGLRQNRQSRLHHDALLVKTLEEQL 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...........................................................................P.... 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmjF.36.2420 7 MPPTALK|SS 0.075 . LmjF.36.2420 15 SMNELSR|YM 0.104 . LmjF.36.2420 26 FTSAAGK|PQ 0.062 . LmjF.36.2420 36 LTIVGDR|VY 0.094 . LmjF.36.2420 43 VYWTQGK|QQ 0.057 . LmjF.36.2420 61 EVAEAVR|VI 0.074 . LmjF.36.2420 74 QEVGEEK|QF 0.068 . LmjF.36.2420 78 EEKQFTK|EE 0.061 . LmjF.36.2420 84 KEEEMLR|ER 0.078 . LmjF.36.2420 86 EEMLRER|TR 0.075 . LmjF.36.2420 88 MLRERTR|SQ 0.202 . LmjF.36.2420 100 IANFHVR|CN 0.155 . LmjF.36.2420 123 YYQNGPR|AG 0.073 . LmjF.36.2420 126 NGPRAGK|AP 0.102 . LmjF.36.2420 130 AGKAPLK|LF 0.059 . LmjF.36.2420 140 YMSEEDK|TH 0.068 . LmjF.36.2420 144 EDKTHFK|AM 0.078 . LmjF.36.2420 149 FKAMGSK|PN 0.062 . LmjF.36.2420 158 LFVQAIK|SF 0.092 . LmjF.36.2420 181 NNNNVYK|AT 0.077 . LmjF.36.2420 225 IQEEFSR|YT 0.114 . LmjF.36.2420 234 GHYATDR|YI 0.089 . LmjF.36.2420 247 IDSSHMR|SV 0.185 . LmjF.36.2420 281 EEMPYSR|VG 0.086 . LmjF.36.2420 288 VGDPNAR|TT 0.083 . LmjF.36.2420 299 VYDTATK|KM 0.051 . LmjF.36.2420 300 YDTATKK|MR 0.064 . LmjF.36.2420 302 TATKKMR|LL 0.100 . LmjF.36.2420 310 LPDVAIR|KV 0.115 . LmjF.36.2420 311 PDVAIRK|VA 0.077 . LmjF.36.2420 321 WTEYILR|FG 0.087 . LmjF.36.2420 325 ILRFGFK|DA 0.103 . LmjF.36.2420 337 YVSVASR|AQ 0.121 . LmjF.36.2420 357 ALPTIAK|EE 0.053 . LmjF.36.2420 362 AKEEDLR|SL 0.111 . LmjF.36.2420 368 RSLYSEK|DG 0.063 . LmjF.36.2420 371 YSEKDGK|VT 0.064 . LmjF.36.2420 386 AAAPELR|VE 0.085 . LmjF.36.2420 390 ELRVEWK|QR 0.069 . LmjF.36.2420 392 RVEWKQR|ID 0.110 . LmjF.36.2420 410 VPVHYGK|VY 0.067 . LmjF.36.2420 417 VYDVLCR|HA 0.098 . LmjF.36.2420 432 HYHLYAR|PA 0.193 . LmjF.36.2420 443 GNPETWK|PL 0.070 . LmjF.36.2420 463 QHVCEDR|VY 0.075 . LmjF.36.2420 473 LANAEGR|LK 0.087 . LmjF.36.2420 475 NAEGRLK|RT 0.055 . LmjF.36.2420 476 AEGRLKR|TL 0.522 *ProP* LmjF.36.2420 497 IADALTR|LT 0.086 . LmjF.36.2420 511 VYSYCAK|GD 0.075 . LmjF.36.2420 527 TAAAPAK|LY 0.072 . LmjF.36.2420 538 CVSAPQK|RA 0.080 . LmjF.36.2420 539 VSAPQKR|AE 0.210 . LmjF.36.2420 564 TTADPTR|YF 0.137 . LmjF.36.2420 582 IVTVTNR|RG 0.066 . LmjF.36.2420 583 VTVTNRR|GV 0.135 . LmjF.36.2420 599 VSPSAPK|DA 0.071 . LmjF.36.2420 626 ENDYETR|CK 0.090 . LmjF.36.2420 628 DYETRCK|AP 0.066 . LmjF.36.2420 655 SNANGLR|DL 0.131 . LmjF.36.2420 661 RDLSICK|KN 0.061 . LmjF.36.2420 662 DLSICKK|NF 0.129 . LmjF.36.2420 694 GSPANFR|FD 0.105 . LmjF.36.2420 698 NFRFDAK|RV 0.077 . LmjF.36.2420 699 FRFDAKR|VA 0.218 . LmjF.36.2420 724 QAADVFR|IG 0.112 . LmjF.36.2420 736 APVGDWK|LY 0.071 . LmjF.36.2420 745 DTGYTER|YM 0.099 . LmjF.36.2420 763 AESGASR|NR 0.098 . LmjF.36.2420 765 SGASRNR|NE 0.081 . LmjF.36.2420 787 FPEECNR|LY 0.077 . LmjF.36.2420 809 HSCHVVK|AL 0.070 . LmjF.36.2420 816 ALVDNAK|PY 0.067 . LmjF.36.2420 827 LVYPGER|HG 0.072 . LmjF.36.2420 831 GERHGLR|QN 0.107 . LmjF.36.2420 834 HGLRQNR|QS 0.208 . LmjF.36.2420 837 RQNRQSR|LH 0.324 . LmjF.36.2420 846 HDALLVK|TL 0.072 . ____________________________^_________________

  • Fasta :-

    >LmjF.36.2420 ATGCCGCCGACAGCACTGAAGAGCTCCATGAACGAGCTCTCTCGGTACATGGACGCCTTC ACCTCTGCAGCGGGCAAACCGCAACACCTCACAATTGTTGGCGATCGCGTCTACTGGACG CAGGGCAAGCAGCAGGAGCTGTACTCGGCGCCGGTCGGCTTGGAAGTCGCCGAGGCCGTC CGTGTCATTGCCTCAGACGAGCAGGAAGTCGGGGAAGAGAAGCAGTTCACCAAGGAGGAG GAGATGCTGCGCGAGCGGACGCGCAGCCAGACGACGGGCATCGCGAATTTTCACGTTCGC TGCAACGATGGCGCCATCTTCTACACAAGCGGGGTCGAAGTGTATGTCTACTACCAGAAC GGGCCGCGTGCCGGCAAGGCCCCTCTGAAGCTGTTCGACTACATGTCTGAGGAAGACAAG ACTCACTTCAAGGCGATGGGCAGCAAGCCGAACCTCTTTGTGCAGGCCATCAAGTCCTTT GATGAGGCGCACCCGAGCACCCACACCGTCATGACCTTTGTCAACAACAATAATGTGTAC AAGGCAACCCTGACGGAGAGCCCCGCAAGCGAGGAGGCGCCGCTGGCCGTCACCGTGGAG CAGATCACGCACATCGGCGACGACCTGCACCAGTGCGGTGTGGCGGATTACATCATCCAG GAAGAGTTCTCGCGGTACACGGGGCACTACGCGACGGACCGGTACATTGTCTTCTCCTAC ATCGACTCCTCCCACATGCGCTCTGTGGCCCTGCTCAGCAGTCTGGGATCTCCTGAGGTG CCGGAAGCGGAGCCGGCGTGCCCGACCTACGCGACAGAGATGGAGGAGATGCCGTACTCC CGTGTCGGTGACCCAAACGCGCGCACAACACTTATCGTATACGACACCGCCACGAAGAAG ATGCGTCTGCTCCCCGATGTCGCCATTCGCAAGGTGGCACCGTGGACGGAGTACATTCTT CGCTTCGGCTTCAAAGATGCAGAAACGCTCTATGTCTCCGTCGCGAGTCGCGCACAGGAG GACTACGCGGTGATGAGCTGCCCCATCGCAGCGCTGCCCACCATCGCCAAAGAGGAAGAC CTGCGGTCCCTCTACAGTGAAAAGGACGGCAAAGTCACTGCGAACATTATTGGCGATGCC GCTGCGCCGGAGCTGCGCGTGGAGTGGAAGCAACGCATTGACTTTGCGTGGGTGGAGTGC CAGCCCGGGGTGCCGGTGCACTACGGCAAGGTGTACGACGTGCTTTGCCGCCACGCAGCA GAAACGGAGACGGCGCACTACCACCTCTACGCCCGTCCCGCCGGCGACGGCAATCCAGAG ACGTGGAAGCCGCTGACGGCGGGAGCATGGAACGTGTGCGCGGGCACGCAGCATGTGTGT GAGGACCGCGTGTACTTCCTGGCGAACGCCGAAGGGCGCCTGAAGCGCACGCTCTACTCC GTGCCGCTGTCGCTGGAGAGTGCGCCGCATATCGCCGACGCACTGACTCGCCTCACCCCG CTGGACGAGCACGTCTACAGCTACTGTGCCAAGGGTGACCATCTCTACTACGTCTCCAGC ACCGCCGCTGCACCGGCGAAGCTCTACGTGAGCTGCGTCTCAGCACCGCAGAAAAGAGCG GAGGTCACCGTTCCGTCATGGATTGCCACAACGCCAGGAACCGACCCGGCCACAACAGCA GATCCAACCCGCTACTTTGGCGGCCTGCCGGTCGTGACTCCGCAAATTGTGACCGTGACG AACCGTCGCGGGGTACCACTGAGCGCAGCGGTGTTCGTCTCGCCAAGCGCACCAAAGGAT GCACCAGGGCCACTAGCCCTGTTCATCTACGGCGGACCACACGCGCAGCTTGTGTTCGAG AACGACTACGAGACCCGTTGCAAGGCCCCGGTGCAGGTATTGCTGCAGCACGGCATCTCC GTTGCCGTAGTGGACAACCAAATGAGCAACGCTAACGGGTTGCGTGACTTGAGCATCTGC AAGAAGAACTTTGGCAACTTCGAGACACACGACTACGTCGATGTGACGCAGTACCTCTGC AACACGCCGGAGTCCGAGAGCGGCTCCCCCGCCAACTTCCGTTTTGATGCGAAGCGTGTG GCGATCTTTGGCTGGTCCTACGGCGGCTATGCAACCCTCCTCGCCATGTGCCAGGCAGCG GATGTCTTTCGGATCGGCTTCGCGGGCGCGCCAGTTGGCGACTGGAAACTGTACGACACA GGCTACACAGAGCGCTACATGGGGGCCCTTTACGGGGAGGACGGCAGCGCGGAAAGCGGC GCATCGCGAAACAGGAACGAGGCGTACATGACGTCAGCCATCAGCCATTACGCCGGGGGC TTTCCCGAGGAGTGCAACCGCCTCTACATCGCACACGGCCTTCTCGATGAGAACGTGCAC TTTGGCCATAGCTGCCACGTGGTGAAGGCACTGGTCGACAACGCCAAGCCGTACAGCATG CTCGTGTACCCCGGGGAACGCCACGGCCTGCGTCAGAACCGCCAATCACGCCTGCACCAC GACGCACTTCTCGTCAAGACACTAGAGGAGCAGCTCTAG
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  • Fasta :-

    MPPTALKSSMNELSRYMDAFTSAAGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAV RVIASDEQEVGEEKQFTKEEEMLRERTRSQTTGIANFHVRCNDGAIFYTSGVEVYVYYQN GPRAGKAPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSFDEAHPSTHTVMTFVNNNNVY KATLTESPASEEAPLAVTVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY IDSSHMRSVALLSSLGSPEVPEAEPACPTYATEMEEMPYSRVGDPNARTTLIVYDTATKK MRLLPDVAIRKVAPWTEYILRFGFKDAETLYVSVASRAQEDYAVMSCPIAALPTIAKEED LRSLYSEKDGKVTANIIGDAAAPELRVEWKQRIDFAWVECQPGVPVHYGKVYDVLCRHAA ETETAHYHLYARPAGDGNPETWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS VPLSLESAPHIADALTRLTPLDEHVYSYCAKGDHLYYVSSTAAAPAKLYVSCVSAPQKRA EVTVPSWIATTPGTDPATTADPTRYFGGLPVVTPQIVTVTNRRGVPLSAAVFVSPSAPKD APGPLALFIYGGPHAQLVFENDYETRCKAPVQVLLQHGISVAVVDNQMSNANGLRDLSIC KKNFGNFETHDYVDVTQYLCNTPESESGSPANFRFDAKRVAIFGWSYGGYATLLAMCQAA DVFRIGFAGAPVGDWKLYDTGYTERYMGALYGEDGSAESGASRNRNEAYMTSAISHYAGG FPEECNRLYIAHGLLDENVHFGHSCHVVKALVDNAKPYSMLVYPGERHGLRQNRQSRLHH DALLVKTLEEQL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.36.2420331 YAETLYVSVA0.991unspLmjF.36.2420331 YAETLYVSVA0.991unspLmjF.36.2420331 YAETLYVSVA0.991unspLmjF.36.2420366 SRSLYSEKDG0.997unspLmjF.36.2420190 SESPASEEAP0.996unspLmjF.36.2420239 SYIVFSYIDS0.994unsp

LmjF.36.2420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India