LmjF.36.4300 | trypanothione synthetase-like protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LmjF.36.4300OTHER0.9979930.0018290.000178
No Results

  • Fasta :-

    >LmjF.36.4300 MTVKVASEVSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIIYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPSESYLDGERCVARYAMLTLDEATKT WRIDEPGAMPSAVGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHK IFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLN ATLPEGAGASTEACREVDALFKVLAEEDVVNATETTPDRLRQAVATYFDIPVEWVMAMER DFAKGETHMAAVVSFYPNIATDSAALEAFRAARKRSGTWAAPAVGTVPLTTAKASTPVAE EPLTLSYPATVEELPLKNPHDEAWHLATVNFGNARVMTELSQLNKVKQDLTETIALMTPS MRPFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDGLLRELVSTVQNLCEHVEY PVRIVNEKDLTFVNGKLHATPSAISPEAGSHMTNIAPSGAYDVNFVYALCEWPRILACRE ATHAALYRAAVDPASDVVFAKPLWSYLCSGAVNVSDDAERAHYSHSPRSPSVRFFDVCRR LYLLASPTQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH AGGTLSVESENTGIHVGHPAFLMFMFPAD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/627 Sequence name : 627 Sequence length : 749 VALUES OF COMPUTED PARAMETERS Coef20 : 3.344 CoefTot : 0.140 ChDiff : -24 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.553 1.106 0.170 0.592 MesoH : -0.256 0.344 -0.275 0.237 MuHd_075 : 20.185 11.846 6.481 3.316 MuHd_095 : 15.473 3.586 3.245 1.541 MuHd_100 : 11.617 8.783 3.063 2.500 MuHd_105 : 11.384 12.569 4.875 3.355 Hmax_075 : 14.000 12.250 2.086 4.387 Hmax_095 : 7.700 5.075 -0.584 2.581 Hmax_100 : 5.400 8.300 -0.644 3.270 Hmax_105 : 5.400 11.433 -0.164 3.652 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9488 0.0512 DFMC : 0.8524 0.1476
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 749 LmjF.36.4300 MTVKVASEVSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARRFLLLTTGCVFANCGRASEIY 80 AMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIIYPYHPELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPSESYL 160 DGERCVARYAMLTLDEATKTWRIDEPGAMPSAVGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHK 240 IFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLNATLPEGAGASTEACREVDAL 320 FKVLAEEDVVNATETTPDRLRQAVATYFDIPVEWVMAMERDFAKGETHMAAVVSFYPNIATDSAALEAFRAARKRSGTWA 400 APAVGTVPLTTAKASTPVAEEPLTLSYPATVEELPLKNPHDEAWHLATVNFGNARVMTELSQLNKVKQDLTETIALMTPS 480 MRPFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDGLLRELVSTVQNLCEHVEYPVRIVNEKDLTFVNGKLHAT 560 PSAISPEAGSHMTNIAPSGAYDVNFVYALCEWPRILACREATHAALYRAAVDPASDVVFAKPLWSYLCSGAVNVSDDAER 640 AHYSHSPRSPSVRFFDVCRRLYLLASPTQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH 720 AGGTLSVESENTGIHVGHPAFLMFMFPAD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.36.4300 4 ---MTVK|VA 0.065 . LmjF.36.4300 22 EHQGSFR|GV 0.130 . LmjF.36.4300 30 VVACSNR|DD 0.110 . LmjF.36.4300 51 SIYTGFR|YQ 0.079 . LmjF.36.4300 59 QCVEYAR|RF 0.068 . LmjF.36.4300 60 CVEYARR|FL 0.096 . LmjF.36.4300 75 VFANCGR|AS 0.090 . LmjF.36.4300 98 AQYTLHR|HH 0.113 . LmjF.36.4300 108 DGTATQK|PA 0.061 . LmjF.36.4300 139 SFVDDNR|VG 0.080 . LmjF.36.4300 164 SYLDGER|CV 0.076 . LmjF.36.4300 168 GERCVAR|YA 0.154 . LmjF.36.4300 179 TLDEATK|TW 0.067 . LmjF.36.4300 182 EATKTWR|ID 0.092 . LmjF.36.4300 204 YPDAPTR|EQ 0.090 . LmjF.36.4300 219 PLPCAIK|VR 0.057 . LmjF.36.4300 221 PCAIKVR|ST 0.148 . LmjF.36.4300 240 THYHLHK|IF 0.066 . LmjF.36.4300 250 IPSGCVR|HA 0.150 . LmjF.36.4300 256 RHAYGMR|NG 0.085 . LmjF.36.4300 272 ATSAAAR|VL 0.107 . LmjF.36.4300 275 AAARVLR|FT 0.352 . LmjF.36.4300 284 LHLLFHR|GR 0.064 . LmjF.36.4300 286 LLFHRGR|LG 0.076 . LmjF.36.4300 292 RLGPAFR|AL 0.095 . LmjF.36.4300 315 ASTEACR|EV 0.130 . LmjF.36.4300 322 EVDALFK|VL 0.054 . LmjF.36.4300 339 TETTPDR|LR 0.076 . LmjF.36.4300 341 TTPDRLR|QA 0.087 . LmjF.36.4300 360 WVMAMER|DF 0.147 . LmjF.36.4300 364 MERDFAK|GE 0.074 . LmjF.36.4300 390 AALEAFR|AA 0.086 . LmjF.36.4300 393 EAFRAAR|KR 0.219 . LmjF.36.4300 394 AFRAARK|RS 0.079 . LmjF.36.4300 395 FRAARKR|SG 0.425 . LmjF.36.4300 413 VPLTTAK|AS 0.068 . LmjF.36.4300 437 VEELPLK|NP 0.060 . LmjF.36.4300 455 VNFGNAR|VM 0.076 . LmjF.36.4300 465 ELSQLNK|VK 0.064 . LmjF.36.4300 467 SQLNKVK|QD 0.068 . LmjF.36.4300 482 LMTPSMR|PF 0.080 . LmjF.36.4300 490 FISTQYR|MD 0.137 . LmjF.36.4300 498 DFAGYLK|VV 0.069 . LmjF.36.4300 507 EAVYGPR|TG 0.080 . LmjF.36.4300 525 PMDGLLR|EL 0.064 . LmjF.36.4300 543 HVEYPVR|IV 0.107 . LmjF.36.4300 548 VRIVNEK|DL 0.079 . LmjF.36.4300 556 LTFVNGK|LH 0.054 . LmjF.36.4300 594 ALCEWPR|IL 0.098 . LmjF.36.4300 599 PRILACR|EA 0.118 . LmjF.36.4300 608 THAALYR|AA 0.118 . LmjF.36.4300 621 SDVVFAK|PL 0.084 . LmjF.36.4300 640 VSDDAER|AH 0.072 . LmjF.36.4300 648 HYSHSPR|SP 0.211 . LmjF.36.4300 653 PRSPSVR|FF 0.187 . LmjF.36.4300 659 RFFDVCR|RL 0.069 . LmjF.36.4300 660 FFDVCRR|LY 0.084 . LmjF.36.4300 672 SPTQQPK|TW 0.068 . LmjF.36.4300 682 LEVSEYK|DS 0.069 . LmjF.36.4300 686 EYKDSCR|RI 0.088 . LmjF.36.4300 687 YKDSCRR|IH 0.111 . ____________________________^_________________

  • Fasta :-

    >LmjF.36.4300 ATGACTGTCAAAGTCGCGTCAGAGGTGTCGCTGCTACCATATGGTGAGCATCAAGGCAGC TTTCGGGGTGTTGTGGCGTGCTCTAACCGCGATGACGGCTACTTCAGCGGCGAGAACAAC TACGTGGACACGTCAATCTACACCGGCTTTCGGTACCAATGCGTTGAGTACGCGCGCCGA TTTCTGCTGCTGACGACCGGCTGCGTCTTTGCGAACTGCGGCAGAGCCAGCGAGATCTAC GCGATGGATCACATCACACACGTGGAGACGGGGGCGCAGTATACTCTCCATCGCCACCAC AACGACGGCACAGCAACACAGAAGCCGGCGCCGGGTGACATCATCATCTACCCTTACCAC CCAGAACTAACTCCATGGGGTCACGTTGGTGTCATATCCTTCGTTGACGATAACCGCGTC GGCATCGCAGAGCAGAACCACTACTTTGGCCCTTTCACCTCTCCGAGTGAGTCCTATCTC GACGGTGAGCGGTGTGTCGCACGGTACGCCATGCTCACGCTCGATGAGGCGACCAAGACA TGGCGCATCGATGAACCGGGCGCGATGCCGAGTGCCGTGGGTTGGCTGTCGTACCCTGAT GCACCGACCCGCGAGCAGATTCACGCGCCCTTCACGCCACTTCCCTGCGCGATCAAGGTG CGCTCGACCCCATTCGACCAAGATGACCATCCTTTTCTCACACACTACCACCTGCACAAA ATCTTCGACATCCCCAGCGGATGTGTGAGGCACGCGTACGGCATGCGAAACGGAACTGCC GAAACGTTGGTAGGCGCGACAAGCGCCGCCGCACGTGTGCTGCGGTTTACACTTCATCTT CTCTTCCATCGCGGCCGCCTCGGCCCTGCCTTTCGCGCGTTACCCACGAATCCGCTGAAC GCCACACTGCCGGAGGGTGCGGGTGCAAGCACAGAGGCGTGTCGCGAAGTGGACGCACTC TTCAAGGTGCTTGCCGAGGAAGATGTCGTCAATGCCACCGAGACGACCCCCGACAGGCTG CGTCAGGCTGTGGCAACTTACTTTGACATCCCAGTCGAGTGGGTGATGGCCATGGAGCGG GACTTTGCGAAAGGAGAGACACACATGGCAGCGGTCGTCAGCTTCTACCCAAACATCGCG ACAGACTCGGCCGCCCTGGAGGCGTTTCGCGCAGCACGCAAGCGTTCAGGGACATGGGCG GCGCCGGCCGTTGGGACGGTGCCGCTGACAACAGCCAAAGCCAGTACCCCCGTCGCCGAA GAGCCCCTCACCTTGAGCTACCCAGCTACTGTCGAGGAGTTACCACTCAAGAACCCTCAT GATGAGGCGTGGCACCTGGCAACGGTGAATTTCGGCAACGCGCGCGTCATGACAGAACTG TCGCAGCTCAATAAGGTGAAGCAGGATCTGACGGAGACGATCGCGCTCATGACACCGTCC ATGCGCCCCTTCATTTCCACGCAGTATCGCATGGACTTCGCGGGCTACCTCAAGGTCGTT GAGGCCGTCTACGGCCCTCGCACTGGCTTCACGATTGTCGTGAGCGATGACCAACCGATG GACGGCTTGCTGCGGGAGCTTGTCTCGACCGTGCAGAATTTGTGCGAGCACGTCGAGTAC CCGGTCCGCATTGTGAATGAAAAGGACCTGACGTTTGTGAATGGCAAGCTGCACGCCACA CCGTCAGCGATCTCTCCAGAGGCGGGCAGCCACATGACCAACATCGCGCCTAGCGGGGCG TACGACGTGAACTTTGTGTACGCGCTGTGCGAATGGCCGCGCATTTTGGCGTGCAGAGAG GCCACCCACGCTGCCTTGTACCGCGCCGCTGTGGACCCAGCGTCGGATGTTGTGTTTGCG AAGCCGCTGTGGTCGTACCTCTGCTCTGGTGCGGTGAACGTCAGCGACGACGCAGAGAGG GCGCACTACAGTCATTCGCCGCGCTCCCCGTCGGTGCGCTTCTTCGATGTGTGCCGCCGC CTGTATCTGCTGGCATCGCCGACGCAGCAGCCAAAAACATGGGATTTGGAAGTATCCGAG TACAAGGATAGCTGCCGCCGCATTCACGTCGACGCTGAGACGGTGCCGATGCACTCTCCA GCCCACCTCAACGCCGACTCCCTCATGATCAATCTAGCGGGGAGCTGCTACATGGGACAC GCAGGCGGCACGCTGAGTGTTGAATCGGAGAACACCGGCATTCACGTTGGCCACCCGGCT TTCCTCATGTTCATGTTTCCCGCCGACTAG
  • Download Fasta

  • Fasta :-

    MTVKVASEVSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIIYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPSESYLDGERCVARYAMLTLDEATKT WRIDEPGAMPSAVGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHK IFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLN ATLPEGAGASTEACREVDALFKVLAEEDVVNATETTPDRLRQAVATYFDIPVEWVMAMER DFAKGETHMAAVVSFYPNIATDSAALEAFRAARKRSGTWAAPAVGTVPLTTAKASTPVAE EPLTLSYPATVEELPLKNPHDEAWHLATVNFGNARVMTELSQLNKVKQDLTETIALMTPS MRPFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDGLLRELVSTVQNLCEHVEY PVRIVNEKDLTFVNGKLHATPSAISPEAGSHMTNIAPSGAYDVNFVYALCEWPRILACRE ATHAALYRAAVDPASDVVFAKPLWSYLCSGAVNVSDDAERAHYSHSPRSPSVRFFDVCRR LYLLASPTQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH AGGTLSVESENTGIHVGHPAFLMFMFPAD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.36.4300651 SPRSPSVRFF0.995unspLmjF.36.4300651 SPRSPSVRFF0.995unspLmjF.36.4300651 SPRSPSVRFF0.995unspLmjF.36.4300158 SSPSESYLDG0.997unspLmjF.36.4300565 SPSAISPEAG0.997unsp

LmjF.36.4300      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India