LmjF.36.5560 | aminopeptidase P1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.36.5560mTP0.0315490.0001880.968262CS pos: 25-26. TRW-IG. Pr: 0.3522
No Results

  • Fasta :-

    >LmjF.36.5560 MLRRAWRTAPAQRHSVSVTLGSTRWIGGSTAVAEEVSAQEYADRRRRFLECLPDNSIVLL PAADESLYSHDILWPHRQDSLWYHLFGMRVPMRHQLAPPSSAITEDVRVTIAAFAKGMKG APTQTLLCVPPVTTDTATLVWRSEAVPLSEYKSRLCADTDGGMLSPCRHENVVTTNEVGT VCAAVRRLITDMAQQQVKEWAEHSDVELSTLPGEGGGGGGEEGVQAGRLLALGILPRVFA AYPQQLRWDGRGYRLRQPAASMLLAKTRDVADSTSVFHHPLEAFFSTLSAIPFVVHLPRP LPLATAAALGQQSACSVVAFRYSAVGGHTPGLVPSTANALPKRSRVPCTPRGRDSPAAVA NASASAESEPGSTIQLCLPVRRSDAYAWLYRQVKDRSQLRQHLRSARATEDAFLQLMRCA PATLSEHVLHCAFQRAVCDISAHAGAAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGD IVRVDAGVEVDGVPTDCTRTLPIGSSRFPSSYVPLYEGLLEIQRKLLRCMRPGASVRDMA RMHIDETRALLCLLGVDVRRAAPSSAAHNPCPHESATATSSPEQQVPLALVRSCFCAHLF GHFFGLDIHEELSSVSRPLPTAAAKEEAAQRQRPTPRILQGGMMHTVEPGVYVPSAQRAA LFGLERAHLPIAFHGGVGVQIEDDVLVLPSPNDEDVDVCKGDEPLVRCPWSCGDYLQHAL AAFHRYHGSGDAGLMPSLLVSVCDAHVSTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAK ASVATDVCAIQQQTFVPNPAYSNGPPVPHATVSDWYPYSSIVLTATIPKDIALIEAVMRQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/468 Sequence name : 468 Sequence length : 840 VALUES OF COMPUTED PARAMETERS Coef20 : 5.044 CoefTot : 0.675 ChDiff : -2 ZoneTo : 33 KR : 5 DE : 0 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.512 0.155 0.606 MesoH : 0.406 0.609 -0.148 0.319 MuHd_075 : 39.841 16.348 7.855 9.373 MuHd_095 : 26.952 12.254 5.829 5.477 MuHd_100 : 28.995 16.030 7.030 6.254 MuHd_105 : 36.736 20.115 8.582 8.070 Hmax_075 : 10.383 8.300 0.433 4.190 Hmax_095 : 10.412 5.400 1.501 3.456 Hmax_100 : 9.100 9.300 0.117 3.180 Hmax_105 : 7.467 8.517 -0.064 3.967 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0282 0.9718 DFMC : 0.0259 0.9741 This protein is probably imported in mitochondria. f(Ser) = 0.1212 f(Arg) = 0.1515 CMi = 0.42965 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 840 LmjF.36.5560 MLRRAWRTAPAQRHSVSVTLGSTRWIGGSTAVAEEVSAQEYADRRRRFLECLPDNSIVLLPAADESLYSHDILWPHRQDS 80 LWYHLFGMRVPMRHQLAPPSSAITEDVRVTIAAFAKGMKGAPTQTLLCVPPVTTDTATLVWRSEAVPLSEYKSRLCADTD 160 GGMLSPCRHENVVTTNEVGTVCAAVRRLITDMAQQQVKEWAEHSDVELSTLPGEGGGGGGEEGVQAGRLLALGILPRVFA 240 AYPQQLRWDGRGYRLRQPAASMLLAKTRDVADSTSVFHHPLEAFFSTLSAIPFVVHLPRPLPLATAAALGQQSACSVVAF 320 RYSAVGGHTPGLVPSTANALPKRSRVPCTPRGRDSPAAVANASASAESEPGSTIQLCLPVRRSDAYAWLYRQVKDRSQLR 400 QHLRSARATEDAFLQLMRCAPATLSEHVLHCAFQRAVCDISAHAGAAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGD 480 IVRVDAGVEVDGVPTDCTRTLPIGSSRFPSSYVPLYEGLLEIQRKLLRCMRPGASVRDMARMHIDETRALLCLLGVDVRR 560 AAPSSAAHNPCPHESATATSSPEQQVPLALVRSCFCAHLFGHFFGLDIHEELSSVSRPLPTAAAKEEAAQRQRPTPRILQ 640 GGMMHTVEPGVYVPSAQRAALFGLERAHLPIAFHGGVGVQIEDDVLVLPSPNDEDVDVCKGDEPLVRCPWSCGDYLQHAL 720 AAFHRYHGSGDAGLMPSLLVSVCDAHVSTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAKASVATDVCAIQQQTFVPNPA 800 YSNGPPVPHATVSDWYPYSSIVLTATIPKDIALIEAVMRQ 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ........................................ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.36.5560 3 ----MLR|RA 0.083 . LmjF.36.5560 4 ---MLRR|AW 0.177 . LmjF.36.5560 7 MLRRAWR|TA 0.497 . LmjF.36.5560 13 RTAPAQR|HS 0.093 . LmjF.36.5560 24 VTLGSTR|WI 0.107 . LmjF.36.5560 44 AQEYADR|RR 0.073 . LmjF.36.5560 45 QEYADRR|RR 0.077 . LmjF.36.5560 46 EYADRRR|RF 0.114 . LmjF.36.5560 47 YADRRRR|FL 0.499 . LmjF.36.5560 77 DILWPHR|QD 0.078 . LmjF.36.5560 89 YHLFGMR|VP 0.067 . LmjF.36.5560 93 GMRVPMR|HQ 0.092 . LmjF.36.5560 108 AITEDVR|VT 0.078 . LmjF.36.5560 116 TIAAFAK|GM 0.088 . LmjF.36.5560 119 AFAKGMK|GA 0.072 . LmjF.36.5560 142 TATLVWR|SE 0.106 . LmjF.36.5560 152 VPLSEYK|SR 0.066 . LmjF.36.5560 154 LSEYKSR|LC 0.121 . LmjF.36.5560 168 GMLSPCR|HE 0.082 . LmjF.36.5560 186 TVCAAVR|RL 0.088 . LmjF.36.5560 187 VCAAVRR|LI 0.161 . LmjF.36.5560 198 MAQQQVK|EW 0.066 . LmjF.36.5560 228 EGVQAGR|LL 0.069 . LmjF.36.5560 237 ALGILPR|VF 0.086 . LmjF.36.5560 247 AYPQQLR|WD 0.082 . LmjF.36.5560 251 QLRWDGR|GY 0.107 . LmjF.36.5560 254 WDGRGYR|LR 0.172 . LmjF.36.5560 256 GRGYRLR|QP 0.102 . LmjF.36.5560 266 ASMLLAK|TR 0.072 . LmjF.36.5560 268 MLLAKTR|DV 0.206 . LmjF.36.5560 299 FVVHLPR|PL 0.083 . LmjF.36.5560 321 CSVVAFR|YS 0.136 . LmjF.36.5560 342 TANALPK|RS 0.062 . LmjF.36.5560 343 ANALPKR|SR 0.267 . LmjF.36.5560 345 ALPKRSR|VP 0.072 . LmjF.36.5560 351 RVPCTPR|GR 0.075 . LmjF.36.5560 353 PCTPRGR|DS 0.096 . LmjF.36.5560 381 QLCLPVR|RS 0.078 . LmjF.36.5560 382 LCLPVRR|SD 0.141 . LmjF.36.5560 391 AYAWLYR|QV 0.097 . LmjF.36.5560 394 WLYRQVK|DR 0.192 . LmjF.36.5560 396 YRQVKDR|SQ 0.179 . LmjF.36.5560 400 KDRSQLR|QH 0.080 . LmjF.36.5560 404 QLRQHLR|SA 0.255 . LmjF.36.5560 407 QHLRSAR|AT 0.442 . LmjF.36.5560 418 AFLQLMR|CA 0.092 . LmjF.36.5560 435 LHCAFQR|AV 0.159 . LmjF.36.5560 451 GAAAQVR|CA 0.115 . LmjF.36.5560 463 VVASGVR|GS 0.091 . LmjF.36.5560 483 APGDIVR|VD 0.093 . LmjF.36.5560 499 VPTDCTR|TL 0.075 . LmjF.36.5560 507 LPIGSSR|FP 0.107 . LmjF.36.5560 524 GLLEIQR|KL 0.065 . LmjF.36.5560 525 LLEIQRK|LL 0.095 . LmjF.36.5560 528 IQRKLLR|CM 0.087 . LmjF.36.5560 531 KLLRCMR|PG 0.179 . LmjF.36.5560 537 RPGASVR|DM 0.112 . LmjF.36.5560 541 SVRDMAR|MH 0.110 . LmjF.36.5560 548 MHIDETR|AL 0.090 . LmjF.36.5560 559 LLGVDVR|RA 0.083 . LmjF.36.5560 560 LGVDVRR|AA 0.149 . LmjF.36.5560 592 VPLALVR|SC 0.098 . LmjF.36.5560 617 ELSSVSR|PL 0.102 . LmjF.36.5560 625 LPTAAAK|EE 0.065 . LmjF.36.5560 631 KEEAAQR|QR 0.069 . LmjF.36.5560 633 EAAQRQR|PT 0.097 . LmjF.36.5560 637 RQRPTPR|IL 0.144 . LmjF.36.5560 658 YVPSAQR|AA 0.075 . LmjF.36.5560 666 ALFGLER|AH 0.081 . LmjF.36.5560 700 EDVDVCK|GD 0.073 . LmjF.36.5560 707 GDEPLVR|CP 0.088 . LmjF.36.5560 725 ALAAFHR|YH 0.137 . LmjF.36.5560 764 ATQNVLR|FL 0.138 . LmjF.36.5560 770 RFLFAQR|VA 0.097 . LmjF.36.5560 778 AMEGLPK|AK 0.062 . LmjF.36.5560 780 EGLPKAK|AS 0.063 . LmjF.36.5560 829 LTATIPK|DI 0.079 . LmjF.36.5560 839 LIEAVMR|Q- 0.095 . ____________________________^_________________

  • Fasta :-

    >LmjF.36.5560 ATGCTTCGCCGAGCATGGCGTACCGCACCAGCGCAAAGGCATAGTGTGTCGGTCACGTTG GGCTCGACGCGCTGGATCGGTGGCTCAACCGCAGTAGCTGAAGAAGTGAGCGCGCAGGAG TACGCGGACCGGCGCAGGCGGTTCCTGGAGTGCCTCCCAGATAATTCCATTGTTCTTCTT CCCGCCGCCGATGAATCGCTCTATAGCCACGATATCCTGTGGCCGCATCGTCAAGACTCC TTGTGGTATCACCTGTTTGGCATGCGCGTCCCGATGCGGCATCAGCTCGCCCCGCCTTCG TCGGCGATCACCGAGGATGTACGGGTCACCATCGCGGCCTTTGCCAAGGGCATGAAGGGC GCCCCCACGCAAACCCTCCTCTGTGTGCCGCCTGTGACGACGGACACAGCGACGCTGGTG TGGAGATCTGAGGCGGTGCCGCTCAGCGAGTACAAAAGTCGTCTCTGCGCGGATACTGAT GGTGGTATGCTGTCGCCTTGCAGACACGAGAACGTGGTCACGACGAACGAAGTGGGCACC GTCTGCGCAGCGGTGCGCCGGCTTATCACAGACATGGCACAGCAGCAGGTAAAGGAATGG GCAGAGCACAGCGACGTCGAGCTGTCAACGTTGCCGGGAGAAGGAGGAGGAGGAGGAGGA GAAGAAGGGGTGCAGGCAGGGAGGCTACTTGCGCTGGGCATCCTGCCGAGAGTGTTCGCG GCGTATCCGCAACAGCTACGCTGGGATGGAAGAGGCTACCGCCTTCGCCAGCCAGCGGCA TCGATGCTGCTCGCAAAAACGCGGGATGTAGCCGACAGCACCTCTGTCTTTCACCATCCA CTTGAGGCGTTCTTCTCCACGCTGAGCGCGATACCCTTTGTGGTGCACCTGCCACGTCCA CTCCCTCTTGCAACAGCAGCAGCACTGGGGCAGCAGTCGGCCTGCAGCGTAGTCGCCTTC CGCTACTCGGCAGTTGGCGGTCATACCCCTGGGCTCGTGCCCAGCACTGCGAACGCGCTA CCTAAGCGAAGCCGCGTGCCCTGCACCCCACGAGGGCGTGATTCTCCGGCTGCCGTCGCC AACGCATCCGCAAGCGCTGAAAGCGAGCCGGGTTCCACGATACAGCTCTGTCTGCCTGTT CGTCGCAGTGATGCATACGCGTGGCTGTACCGGCAGGTCAAAGACCGATCACAGCTACGA CAGCACCTTCGCAGTGCCCGCGCAACAGAGGATGCTTTTCTGCAGCTCATGCGCTGCGCC CCCGCGACACTGTCGGAGCACGTGCTGCATTGTGCGTTTCAGCGTGCCGTGTGCGACATA AGCGCGCACGCCGGGGCAGCTGCCCAGGTACGATGCGCGTACATTCCCGTCGTGGCAAGC GGCGTGCGCGGCAGCGAAATCCACTTCACCGACAACGACGGTGTGGCCGCACCGGGTGAC ATCGTGCGCGTGGACGCCGGTGTGGAGGTGGACGGCGTCCCCACGGACTGCACGCGAACA CTTCCAATAGGCAGCTCACGCTTTCCCTCCTCGTACGTGCCGCTGTACGAGGGATTGCTC GAGATTCAGCGCAAGCTGCTCCGGTGCATGAGGCCTGGGGCTTCGGTCCGTGACATGGCT CGAATGCACATCGACGAAACGCGGGCGTTGCTTTGCTTGCTTGGGGTCGATGTGCGTCGT GCAGCACCCTCGTCAGCCGCGCACAACCCGTGCCCCCACGAGTCGGCTACTGCGACCTCG TCGCCGGAGCAGCAGGTACCGCTTGCCTTGGTGCGCTCCTGCTTCTGTGCTCACTTGTTC GGCCATTTCTTTGGCCTCGACATCCATGAGGAGCTAAGTAGCGTCTCGCGGCCACTCCCA ACGGCAGCGGCAAAGGAAGAGGCCGCGCAGCGGCAGCGACCGACTCCGCGCATCCTGCAA GGAGGCATGATGCACACTGTTGAGCCTGGCGTCTACGTGCCGAGCGCACAACGAGCGGCC CTCTTCGGCCTCGAGAGGGCGCACTTGCCGATCGCGTTTCACGGCGGCGTTGGCGTGCAA ATCGAAGACGACGTTCTCGTCTTGCCTTCCCCGAATGACGAGGACGTCGATGTTTGCAAA GGTGACGAGCCTCTGGTGCGCTGTCCATGGAGCTGTGGGGACTACCTCCAGCACGCCCTC GCTGCTTTTCATCGCTACCACGGCAGTGGAGACGCAGGGTTGATGCCCTCCCTGCTGGTG TCTGTGTGCGACGCGCATGTGTCCACAGTATGGGGGGGATGCATGACTGCCGCTACGCAA AATGTGTTGCGCTTCCTGTTTGCCCAGCGCGTGGCTATGGAAGGGTTACCAAAGGCGAAG GCGTCCGTGGCAACGGACGTGTGCGCCATACAGCAGCAGACGTTTGTGCCGAATCCAGCA TACTCAAACGGACCACCGGTGCCGCATGCGACAGTCTCTGACTGGTACCCGTACTCGAGC ATCGTCTTGACCGCCACTATCCCGAAGGACATTGCGCTTATAGAAGCTGTCATGCGGCAG TGA
  • Download Fasta

  • Fasta :-

    MLRRAWRTAPAQRHSVSVTLGSTRWIGGSTAVAEEVSAQEYADRRRRFLECLPDNSIVLL PAADESLYSHDILWPHRQDSLWYHLFGMRVPMRHQLAPPSSAITEDVRVTIAAFAKGMKG APTQTLLCVPPVTTDTATLVWRSEAVPLSEYKSRLCADTDGGMLSPCRHENVVTTNEVGT VCAAVRRLITDMAQQQVKEWAEHSDVELSTLPGEGGGGGGEEGVQAGRLLALGILPRVFA AYPQQLRWDGRGYRLRQPAASMLLAKTRDVADSTSVFHHPLEAFFSTLSAIPFVVHLPRP LPLATAAALGQQSACSVVAFRYSAVGGHTPGLVPSTANALPKRSRVPCTPRGRDSPAAVA NASASAESEPGSTIQLCLPVRRSDAYAWLYRQVKDRSQLRQHLRSARATEDAFLQLMRCA PATLSEHVLHCAFQRAVCDISAHAGAAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGD IVRVDAGVEVDGVPTDCTRTLPIGSSRFPSSYVPLYEGLLEIQRKLLRCMRPGASVRDMA RMHIDETRALLCLLGVDVRRAAPSSAAHNPCPHESATATSSPEQQVPLALVRSCFCAHLF GHFFGLDIHEELSSVSRPLPTAAAKEEAAQRQRPTPRILQGGMMHTVEPGVYVPSAQRAA LFGLERAHLPIAFHGGVGVQIEDDVLVLPSPNDEDVDVCKGDEPLVRCPWSCGDYLQHAL AAFHRYHGSGDAGLMPSLLVSVCDAHVSTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAK ASVATDVCAIQQQTFVPNPAYSNGPPVPHATVSDWYPYSSIVLTATIPKDIALIEAVMRQ

  • title: active site
  • coordinates: H468,D485,D496,H602,E648,E682
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.36.5560535 SRPGASVRDM0.996unspLmjF.36.5560535 SRPGASVRDM0.996unspLmjF.36.5560535 SRPGASVRDM0.996unspLmjF.36.5560581 STATSSPEQQ0.993unspLmjF.36.556015 SAQRHSVSVT0.991unspLmjF.36.5560405 SQHLRSARAT0.994unsp

LmjF.36.5560      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India