LmjF.36.6750 | prolyl endopeptidase

_IDPredictionOTHERSPmTPCS_Position
LmjF.36.6750OTHER0.6939600.0031260.302914
No Results

  • Fasta :-

    >LmjF.36.6750 MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCHAETKEFVRQQNEAFEAYMKSSNEVRD KIVERVTAMLNYARTSNPSLHAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLS ADGTTALKAHAWSENEEFFAYSLSDKGSDWQYIQVLNAETGEQLPDKLNWAKFSGISWWK NDGFFYQRYPELSEDADKGAETDSAQNQYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV TDDHEYLVICVMNGCEPNNLIWIAKLPTTYEELQKPLEFKKVVNTFVGQYSYVGNEGKMF YMTSTKDASRKKIISINLETTEEKDVVAEKESVLNRAALVKDTLIMVYLEDVKDVMYYRK LHGETEMKKLDLPLGTITSLFADYKKDFVSFKVSSFMLPGRSYVMDINNPQGSLTVYKDD VVDGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSTKSPVMLYGYGGFGVSLTPSFSP SRIVFLQHLGGVLAIPNIRGGNEYGQSWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPA TTAIMGGSNGGLLVAACANQAPDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEE DFRVLEKYSPIHNVRAGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHANPELGGPFLAR VEVAAGHGFGKPTSKIITETSDMYAFMAKNIGATWHD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/714 Sequence name : 714 Sequence length : 697 VALUES OF COMPUTED PARAMETERS Coef20 : 4.251 CoefTot : -0.534 ChDiff : -19 ZoneTo : 23 KR : 4 DE : 0 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.553 1.253 0.259 0.564 MesoH : 0.049 0.415 -0.245 0.283 MuHd_075 : 37.329 27.592 8.588 9.222 MuHd_095 : 29.456 18.972 8.172 7.506 MuHd_100 : 32.578 19.643 7.368 8.698 MuHd_105 : 31.779 21.970 7.512 8.205 Hmax_075 : 15.100 17.100 3.137 5.220 Hmax_095 : 10.588 13.700 1.972 4.463 Hmax_100 : 8.500 9.800 1.549 4.600 Hmax_105 : 4.200 12.000 0.196 4.048 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0588 0.9412 DFMC : 0.0943 0.9057 This protein is probably imported in mitochondria. f(Ser) = 0.0435 f(Arg) = 0.1304 CMi = 0.17212 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 697 LmjF.36.6750 MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCHAETKEFVRQQNEAFEAYMKSSNEVRDKIVERVTAMLNYARTSNPSL 80 HAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLSADGTTALKAHAWSENEEFFAYSLSDKGSDWQYIQVLNAET 160 GEQLPDKLNWAKFSGISWWKNDGFFYQRYPELSEDADKGAETDSAQNQYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV 240 TDDHEYLVICVMNGCEPNNLIWIAKLPTTYEELQKPLEFKKVVNTFVGQYSYVGNEGKMFYMTSTKDASRKKIISINLET 320 TEEKDVVAEKESVLNRAALVKDTLIMVYLEDVKDVMYYRKLHGETEMKKLDLPLGTITSLFADYKKDFVSFKVSSFMLPG 400 RSYVMDINNPQGSLTVYKDDVVDGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSTKSPVMLYGYGGFGVSLTPSFSP 480 SRIVFLQHLGGVLAIPNIRGGNEYGQSWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPATTAIMGGSNGGLLVAACANQ 560 APDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEEDFRVLEKYSPIHNVRAGVKYPAILVVTGDHDDRVVPLHSL 640 KYVATLQHANPELGGPFLARVEVAAGHGFGKPTSKIITETSDMYAFMAKNIGATWHD 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.36.6750 2 -----MK|SL 0.097 . LmjF.36.6750 9 SLYPVVR|RA 0.096 . LmjF.36.6750 10 LYPVVRR|AA 0.213 . LmjF.36.6750 20 TYQLHGR|TI 0.095 . LmjF.36.6750 38 PCHAETK|EF 0.069 . LmjF.36.6750 42 ETKEFVR|QQ 0.091 . LmjF.36.6750 53 AFEAYMK|SS 0.080 . LmjF.36.6750 59 KSSNEVR|DK 0.160 . LmjF.36.6750 61 SNEVRDK|IV 0.113 . LmjF.36.6750 65 RDKIVER|VT 0.081 . LmjF.36.6750 74 AMLNYAR|TS 0.094 . LmjF.36.6750 84 PSLHAGK|YY 0.081 . LmjF.36.6750 106 MQATSLK|DD 0.071 . LmjF.36.6750 128 DGTTALK|AH 0.056 . LmjF.36.6750 146 AYSLSDK|GS 0.087 . LmjF.36.6750 167 GEQLPDK|LN 0.073 . LmjF.36.6750 172 DKLNWAK|FS 0.076 . LmjF.36.6750 180 SGISWWK|ND 0.060 . LmjF.36.6750 188 DGFFYQR|YP 0.087 . LmjF.36.6750 198 LSEDADK|GA 0.073 . LmjF.36.6750 214 QYVCFHK|VG 0.064 . LmjF.36.6750 265 NLIWIAK|LP 0.068 . LmjF.36.6750 275 TYEELQK|PL 0.063 . LmjF.36.6750 280 QKPLEFK|KV 0.073 . LmjF.36.6750 281 KPLEFKK|VV 0.132 . LmjF.36.6750 298 YVGNEGK|MF 0.058 . LmjF.36.6750 306 FYMTSTK|DA 0.080 . LmjF.36.6750 310 STKDASR|KK 0.082 . LmjF.36.6750 311 TKDASRK|KI 0.098 . LmjF.36.6750 312 KDASRKK|II 0.165 . LmjF.36.6750 324 LETTEEK|DV 0.080 . LmjF.36.6750 330 KDVVAEK|ES 0.057 . LmjF.36.6750 336 KESVLNR|AA 0.116 . LmjF.36.6750 341 NRAALVK|DT 0.078 . LmjF.36.6750 353 VYLEDVK|DV 0.066 . LmjF.36.6750 359 KDVMYYR|KL 0.104 . LmjF.36.6750 360 DVMYYRK|LH 0.085 . LmjF.36.6750 368 HGETEMK|KL 0.065 . LmjF.36.6750 369 GETEMKK|LD 0.073 . LmjF.36.6750 385 SLFADYK|KD 0.065 . LmjF.36.6750 386 LFADYKK|DF 0.093 . LmjF.36.6750 392 KDFVSFK|VS 0.073 . LmjF.36.6750 401 SFMLPGR|SY 0.115 . LmjF.36.6750 418 GSLTVYK|DD 0.068 . LmjF.36.6750 444 QSADGTK|IP 0.061 . LmjF.36.6750 452 PMFIVHK|KG 0.060 . LmjF.36.6750 453 MFIVHKK|GS 0.096 . LmjF.36.6750 459 KGSLSTK|SP 0.083 . LmjF.36.6750 482 PSFSPSR|IV 0.099 . LmjF.36.6750 499 LAIPNIR|GG 0.086 . LmjF.36.6750 513 SWHDAGR|LT 0.105 . LmjF.36.6750 516 DAGRLTK|KQ 0.100 . LmjF.36.6750 517 AGRLTKK|QN 0.095 . LmjF.36.6750 529 DFVSAAK|YL 0.067 . LmjF.36.6750 535 KYLHSNK|IG 0.067 . LmjF.36.6750 579 GVLDMFK|FH 0.058 . LmjF.36.6750 582 DMFKFHK|FT 0.074 . LmjF.36.6750 603 DEEEDFR|VL 0.083 . LmjF.36.6750 607 DFRVLEK|YS 0.062 . LmjF.36.6750 615 SPIHNVR|AG 0.093 . LmjF.36.6750 619 NVRAGVK|YP 0.062 . LmjF.36.6750 633 TGDHDDR|VV 0.073 . LmjF.36.6750 641 VPLHSLK|YV 0.083 . LmjF.36.6750 660 GGPFLAR|VE 0.107 . LmjF.36.6750 671 AGHGFGK|PT 0.092 . LmjF.36.6750 675 FGKPTSK|II 0.065 . LmjF.36.6750 689 MYAFMAK|NI 0.087 . ____________________________^_________________

  • Fasta :-

    >LmjF.36.6750 ATGAAGTCCCTCTACCCAGTGGTCCGCCGTGCGGCTACGACCTACCAGCTGCACGGCCGC ACAATCCCGGAGCCGTACGACTACCTCGAGGACCCATGTCATGCCGAGACGAAGGAGTTC GTGCGGCAGCAAAACGAGGCATTCGAGGCGTACATGAAGTCCTCCAACGAGGTCCGAGAC AAGATAGTGGAGCGAGTGACGGCGATGCTCAACTACGCGCGCACAAGTAACCCGAGTCTG CACGCTGGCAAGTACTACTATCAATACAACACCGGTCTGCAAAACCAGAGCGTCATCATG CAGGCGACGTCTCTCAAGGACGACAATCCGACTGTCTTTCTCGACCCAAACACTCTTAGT GCCGACGGCACCACTGCTCTCAAGGCGCACGCTTGGAGCGAGAACGAGGAGTTCTTTGCC TACAGCCTCAGCGACAAGGGAAGCGATTGGCAGTACATCCAGGTACTCAACGCGGAGACA GGGGAACAACTTCCGGACAAGCTGAACTGGGCGAAGTTTTCGGGCATCTCGTGGTGGAAA AACGACGGCTTCTTCTACCAGCGCTATCCCGAGCTCAGCGAGGACGCCGACAAGGGCGCC GAGACGGACTCGGCGCAGAATCAGTACGTGTGCTTCCACAAGGTCGGGACCGCGCAGTCG GAGGATTTGCTCATTCTGCAGGTGCCCGAGCATCCCCAGTGGATCTTGGCGGCCGAGGTG ACGGATGACCACGAGTACCTCGTCATCTGCGTCATGAACGGGTGTGAACCGAACAACCTT ATTTGGATCGCGAAGCTGCCGACCACCTACGAGGAGTTGCAGAAGCCGCTGGAGTTCAAG AAGGTGGTGAACACATTCGTCGGCCAGTACAGCTACGTCGGCAACGAGGGTAAGATGTTT TACATGACGAGCACCAAGGATGCTTCGCGCAAAAAGATCATTTCCATTAACCTGGAAACG ACCGAGGAAAAGGATGTCGTCGCTGAGAAGGAGTCAGTGCTGAACCGTGCTGCCCTTGTG AAAGACACGCTGATCATGGTGTATCTTGAGGACGTCAAGGACGTGATGTACTACCGCAAG CTGCACGGGGAGACGGAGATGAAGAAATTGGACCTGCCGCTCGGCACCATCACGTCCTTA TTTGCTGACTATAAGAAGGACTTTGTCTCCTTCAAGGTCTCCTCGTTCATGTTGCCAGGT CGCTCCTATGTCATGGACATCAACAACCCGCAGGGCTCGCTGACGGTCTACAAGGACGAC GTAGTGGACGGCCTCAACGTCGAAGACTATGTCACTGTGCAACACTTTTACCAATCTGCT GATGGCACGAAGATTCCGATGTTTATTGTGCACAAGAAGGGGTCCTTGTCCACCAAATCA CCGGTCATGCTGTACGGCTACGGTGGTTTTGGCGTTTCGCTGACCCCCAGCTTTAGCCCG TCGCGCATCGTCTTTCTACAGCACCTCGGCGGCGTTCTCGCCATTCCGAACATTCGCGGC GGCAACGAGTACGGCCAGTCGTGGCACGACGCCGGGCGCCTTACGAAGAAGCAAAACTGT TTCACCGATTTCGTCTCCGCCGCCAAATATCTCCACAGCAACAAAATTGGCTCCCCTGCC ACAACGGCCATCATGGGCGGCTCCAACGGCGGCCTCCTCGTCGCCGCCTGCGCTAATCAA GCCCCTGACGAGTTCTCGTGCGTCGTGTGCCAAGTGGGCGTCCTTGACATGTTCAAGTTT CACAAGTTCACCATCGGCCATGCTTGGATCTCCGACTACGGCAACCCGGATGAGGAGGAG GACTTCAGGGTATTGGAGAAGTACAGCCCCATCCACAATGTGCGCGCCGGCGTCAAGTAC CCGGCCATCCTCGTGGTGACCGGCGACCATGATGATCGTGTGGTACCGCTGCATTCGCTC AAGTACGTCGCCACGCTGCAGCACGCGAACCCGGAGCTGGGTGGTCCGTTCCTGGCGCGT GTGGAGGTGGCTGCCGGTCACGGCTTCGGCAAGCCCACGAGCAAGATCATCACCGAGACG TCCGACATGTACGCCTTCATGGCGAAGAACATTGGTGCAACGTGGCATGACTGA
  • Download Fasta

  • Fasta :-

    MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCHAETKEFVRQQNEAFEAYMKSSNEVRD KIVERVTAMLNYARTSNPSLHAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLS ADGTTALKAHAWSENEEFFAYSLSDKGSDWQYIQVLNAETGEQLPDKLNWAKFSGISWWK NDGFFYQRYPELSEDADKGAETDSAQNQYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV TDDHEYLVICVMNGCEPNNLIWIAKLPTTYEELQKPLEFKKVVNTFVGQYSYVGNEGKMF YMTSTKDASRKKIISINLETTEEKDVVAEKESVLNRAALVKDTLIMVYLEDVKDVMYYRK LHGETEMKKLDLPLGTITSLFADYKKDFVSFKVSSFMLPGRSYVMDINNPQGSLTVYKDD VVDGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSTKSPVMLYGYGGFGVSLTPSFSP SRIVFLQHLGGVLAIPNIRGGNEYGQSWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPA TTAIMGGSNGGLLVAACANQAPDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEE DFRVLEKYSPIHNVRAGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHANPELGGPFLAR VEVAAGHGFGKPTSKIITETSDMYAFMAKNIGATWHD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.36.6750457 SKGSLSTKSP0.996unspLmjF.36.6750457 SKGSLSTKSP0.996unspLmjF.36.6750457 SKGSLSTKSP0.996unspLmjF.36.6750104 SMQATSLKDD0.996unspLmjF.36.6750309 STKDASRKKI0.992unsp

LmjF.36.6750      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India