LmxM.01.0610 | DNA-damage inducible protein DDI1-like protein

_IDPredictionOTHERSPmTPCS_Position
LmxM.01.0610OTHER0.9999510.0000050.000044
No Results

  • Fasta :-

    >LmxM.01.0610 MDERQVELQRRIYAQIQQQQIDENLANALEYTPEAFAKVPMLYVPCTIHQVLVKAFVDSG AQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIE DQAMDLIIGLDQLRRHQMVIDLKHDCLTIGNINVPFLPENDLPALAGLDDDADEMHAPRH QDPAVTATTAPSPAAPVLSEGERQARMEGFMTFSGITDPKQAAELLEAADWDPNVAAALL FDT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/744 Sequence name : 744 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 3.629 CoefTot : 0.000 ChDiff : -14 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.394 0.114 0.635 MesoH : -0.710 0.451 -0.357 0.246 MuHd_075 : 2.254 10.556 1.766 4.020 MuHd_095 : 34.875 18.264 8.259 6.619 MuHd_100 : 33.735 18.044 8.052 7.253 MuHd_105 : 27.656 14.854 6.719 6.873 Hmax_075 : -15.050 0.087 -5.695 0.670 Hmax_095 : -0.525 3.200 -2.736 1.969 Hmax_100 : 0.100 4.200 -2.741 1.990 Hmax_105 : -6.067 5.717 -2.147 2.812 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8310 0.1690 DFMC : 0.8907 0.1093
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 LmxM.01.0610 MDERQVELQRRIYAQIQQQQIDENLANALEYTPEAFAKVPMLYVPCTIHQVLVKAFVDSGAQNSIMNKRTAERCGLMRLV 80 DVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLRRHQMVIDLKHDCLTIGNINVPFLPEN 160 DLPALAGLDDDADEMHAPRHQDPAVTATTAPSPAAPVLSEGERQARMEGFMTFSGITDPKQAAELLEAADWDPNVAAALL 240 FDT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.01.0610 4 ---MDER|QV 0.127 . LmxM.01.0610 10 RQVELQR|RI 0.098 . LmxM.01.0610 11 QVELQRR|IY 0.169 . LmxM.01.0610 38 TPEAFAK|VP 0.074 . LmxM.01.0610 54 IHQVLVK|AF 0.074 . LmxM.01.0610 68 QNSIMNK|RT 0.062 . LmxM.01.0610 69 NSIMNKR|TA 0.273 . LmxM.01.0610 73 NKRTAER|CG 0.080 . LmxM.01.0610 78 ERCGLMR|LV 0.129 . LmxM.01.0610 83 MRLVDVR|MR 0.109 . LmxM.01.0610 85 LVDVRMR|GV 0.123 . LmxM.01.0610 93 VAVGVGR|QE 0.095 . LmxM.01.0610 99 RQEICGR|IH 0.083 . LmxM.01.0610 134 IGLDQLR|RH 0.070 . LmxM.01.0610 135 GLDQLRR|HQ 0.110 . LmxM.01.0610 143 QMVIDLK|HD 0.058 . LmxM.01.0610 179 DEMHAPR|HQ 0.112 . LmxM.01.0610 203 VLSEGER|QA 0.123 . LmxM.01.0610 206 EGERQAR|ME 0.277 . LmxM.01.0610 220 SGITDPK|QA 0.075 . ____________________________^_________________

  • Fasta :-

    >LmxM.01.0610 ATGGACGAGCGCCAGGTAGAGCTGCAGCGCCGCATCTACGCCCAAATTCAACAGCAGCAG ATAGACGAGAACCTCGCCAACGCGCTCGAGTACACGCCGGAGGCGTTCGCGAAGGTACCG ATGCTCTACGTGCCGTGCACCATCCACCAGGTGCTCGTGAAGGCCTTCGTCGACTCCGGC GCGCAGAACAGCATCATGAACAAGCGCACGGCGGAGCGGTGTGGGCTGATGCGGCTCGTC GACGTCCGCATGCGTGGCGTCGCCGTCGGAGTAGGGCGGCAGGAGATCTGCGGTCGCATC CACATGACCCCTGTGAACCTCGCAGGGATGTACATCCCCTTCGCCTTCTACGTGATCGAG GACCAGGCGATGGACTTGATCATCGGTCTCGACCAGCTGAGGCGCCATCAGATGGTGATA GACCTCAAGCATGACTGTCTCACCATTGGCAACATCAACGTCCCGTTCTTGCCGGAGAAC GATCTGCCCGCGTTGGCGGGGCTGGATGACGACGCGGATGAGATGCACGCGCCGCGTCAC CAGGACCCGGCGGTGACAGCCACCACCGCCCCCAGCCCTGCTGCACCGGTGCTCTCGGAG GGCGAGCGGCAGGCCCGCATGGAAGGCTTTATGACGTTCTCGGGTATCACCGACCCCAAG CAGGCGGCGGAGTTGCTGGAAGCCGCCGACTGGGACCCCAACGTGGCGGCGGCGCTCCTC TTCGACACGTGA
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  • Fasta :-

    MDERQVELQRRIYAQIQQQQIDENLANALEYTPEAFAKVPMLYVPCTIHQVLVKAFVDSG AQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIE DQAMDLIIGLDQLRRHQMVIDLKHDCLTIGNINVPFLPENDLPALAGLDDDADEMHAPRH QDPAVTATTAPSPAAPVLSEGERQARMEGFMTFSGITDPKQAAELLEAADWDPNVAAALL FDT

  • title: catalytic motif
  • coordinates: D58,S59,G60
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India