LmxM.01.0650 | mitochondrial-processing peptidase subunit beta, putative

UniProt_ID: E9AJF2

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0003824 GO:0046872
Computed_GO_Functions: catalytic activity metal ion binding
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs: GO:0020023 GO:0017087 GO:0005739
Curated_GO_Components: kinetoplast mitochondrial processing peptidase complex mitochondrion
Curated_GO_Function_IDs: GO:0004222
Curated_GO_Functions: metalloendopeptidase activity
Curated_GO_Processes: protein import into mitochondrial matrix

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LmxM.01.0650	mTP	0.413497	0.020723	0.565780	CS pos: 37-38. VVY-SS. Pr: 0.2232

No Results

Fasta :-
>LmxM.01.0650 MLRRTGAAAATAALPHNMTMKDPLCQRVLGRCTPVVYSSLPNGFRVATEYVKDCPFATVG VWIDAGSRFEDIRNSGVAHFLEHMNFKGTDRYSKNDVENIFEHRGAHFNAYTSRDRTAYY VKAFTKDVDKMIDVVSDLLQRGRYRRHDIEAERPTILAEMREVEELVDEVLMDNVHQAAY DPTTSGLPLTILGPVENIAKNINKSMIEDYVRVHYTGPRMCLVSSGGISPDAAHALAEKY FSGLSSTNNRPLLRGVYKGGHTILWNEGMATANTAVAFPICGASHPDSYPLQLIHNVIGQ FREGQYDQFSSQRRNPNLPWERVPNLVQLRPFYTPYEETALLGYHIVTARMATSDVARDD AQTLMLNYVLSSLYDLCATKVEDSLLEAAKAEFKSSVMMMRDSTTNSAEDLGRQMIHFGH RVPLQEVFERVDAVTPESLRAAAEKYFAVVQPTVSCIGASSTLPKYDPLSLVSNVVHPQL TPAQFPEDARACLL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/208 Sequence name : 208 Sequence length : 494 VALUES OF COMPUTED PARAMETERS Coef20 : 4.583 CoefTot : -0.436 ChDiff : -8 ZoneTo : 48 KR : 6 DE : 1 CleavSite : 47 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.382 1.206 0.229 0.456 MesoH : -0.251 0.183 -0.311 0.203 MuHd_075 : 56.869 33.908 15.462 11.856 MuHd_095 : 38.352 30.709 12.356 9.405 MuHd_100 : 36.920 28.170 11.265 8.755 MuHd_105 : 34.529 22.282 8.951 8.386 Hmax_075 : 14.700 13.300 3.007 4.678 Hmax_095 : 16.363 20.600 6.279 5.530 Hmax_100 : 16.100 20.600 6.279 5.220 Hmax_105 : 11.600 14.600 6.484 4.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0172 0.9828 DFMC : 0.0342 0.9658 This protein is probably imported in mitochondria. f(Ser) = 0.0417 f(Arg) = 0.1042 CMi = 0.19305 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 494 LmxM.01.0650 MLRRTGAAAATAALPHNMTMKDPLCQRVLGRCTPVVYSSLPNGFRVATEYVKDCPFATVGVWIDAGSRFEDIRNSGVAHF 80 LEHMNFKGTDRYSKNDVENIFEHRGAHFNAYTSRDRTAYYVKAFTKDVDKMIDVVSDLLQRGRYRRHDIEAERPTILAEM 160 REVEELVDEVLMDNVHQAAYDPTTSGLPLTILGPVENIAKNINKSMIEDYVRVHYTGPRMCLVSSGGISPDAAHALAEKY 240 FSGLSSTNNRPLLRGVYKGGHTILWNEGMATANTAVAFPICGASHPDSYPLQLIHNVIGQFREGQYDQFSSQRRNPNLPW 320 ERVPNLVQLRPFYTPYEETALLGYHIVTARMATSDVARDDAQTLMLNYVLSSLYDLCATKVEDSLLEAAKAEFKSSVMMM 400 RDSTTNSAEDLGRQMIHFGHRVPLQEVFERVDAVTPESLRAAAEKYFAVVQPTVSCIGASSTLPKYDPLSLVSNVVHPQL 480 TPAQFPEDARACLL 560 ................................................................................ 80 .................................................................P.............. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.01.0650 3 ----MLR|RT 0.106 . LmxM.01.0650 4 ---MLRR|TG 0.111 . LmxM.01.0650 21 PHNMTMK|DP 0.075 . LmxM.01.0650 27 KDPLCQR|VL 0.088 . LmxM.01.0650 31 CQRVLGR|CT 0.104 . LmxM.01.0650 45 SLPNGFR|VA 0.089 . LmxM.01.0650 52 VATEYVK|DC 0.060 . LmxM.01.0650 68 WIDAGSR|FE 0.071 . LmxM.01.0650 73 SRFEDIR|NS 0.114 . LmxM.01.0650 87 LEHMNFK|GT 0.076 . LmxM.01.0650 91 NFKGTDR|YS 0.080 . LmxM.01.0650 94 GTDRYSK|ND 0.103 . LmxM.01.0650 104 ENIFEHR|GA 0.111 . LmxM.01.0650 114 FNAYTSR|DR 0.112 . LmxM.01.0650 116 AYTSRDR|TA 0.075 . LmxM.01.0650 122 RTAYYVK|AF 0.066 . LmxM.01.0650 126 YVKAFTK|DV 0.119 . LmxM.01.0650 130 FTKDVDK|MI 0.068 . LmxM.01.0650 141 VSDLLQR|GR 0.068 . LmxM.01.0650 143 DLLQRGR|YR 0.081 . LmxM.01.0650 145 LQRGRYR|RH 0.084 . LmxM.01.0650 146 QRGRYRR|HD 0.618 *ProP* LmxM.01.0650 153 HDIEAER|PT 0.090 . LmxM.01.0650 161 TILAEMR|EV 0.133 . LmxM.01.0650 200 PVENIAK|NI 0.065 . LmxM.01.0650 204 IAKNINK|SM 0.075 . LmxM.01.0650 212 MIEDYVR|VH 0.082 . LmxM.01.0650 219 VHYTGPR|MC 0.074 . LmxM.01.0650 239 AHALAEK|YF 0.064 . LmxM.01.0650 250 LSSTNNR|PL 0.100 . LmxM.01.0650 254 NNRPLLR|GV 0.240 . LmxM.01.0650 258 LLRGVYK|GG 0.092 . LmxM.01.0650 302 NVIGQFR|EG 0.079 . LmxM.01.0650 313 DQFSSQR|RN 0.069 . LmxM.01.0650 314 QFSSQRR|NP 0.099 . LmxM.01.0650 322 PNLPWER|VP 0.065 . LmxM.01.0650 330 PNLVQLR|PF 0.074 . LmxM.01.0650 350 YHIVTAR|MA 0.106 . LmxM.01.0650 358 ATSDVAR|DD 0.161 . LmxM.01.0650 380 YDLCATK|VE 0.055 . LmxM.01.0650 390 SLLEAAK|AE 0.068 . LmxM.01.0650 394 AAKAEFK|SS 0.073 . LmxM.01.0650 401 SSVMMMR|DS 0.119 . LmxM.01.0650 413 SAEDLGR|QM 0.098 . LmxM.01.0650 421 MIHFGHR|VP 0.079 . LmxM.01.0650 430 LQEVFER|VD 0.080 . LmxM.01.0650 440 VTPESLR|AA 0.081 . LmxM.01.0650 445 LRAAAEK|YF 0.103 . LmxM.01.0650 465 ASSTLPK|YD 0.076 . LmxM.01.0650 490 QFPEDAR|AC 0.072 . ____________________________^_________________

Fasta :-
>LmxM.01.0650 ATGCTGCGGCGAACCGGCGCCGCGGCGGCAACGGCGGCGCTGCCGCACAACATGACGATG AAGGACCCGCTCTGTCAGCGGGTGCTGGGCCGCTGCACCCCCGTCGTCTACTCCTCACTG CCGAACGGCTTCCGGGTGGCGACGGAGTACGTGAAGGACTGCCCCTTTGCCACCGTCGGC GTGTGGATCGACGCCGGCAGCCGCTTCGAGGATATCCGCAACAGCGGCGTGGCACACTTC CTGGAGCACATGAACTTCAAGGGCACCGACCGGTACTCGAAGAACGACGTCGAGAACATC TTCGAGCACCGCGGCGCGCACTTCAACGCGTACACCTCGCGCGACCGTACCGCCTACTAC GTGAAGGCGTTCACAAAGGATGTGGACAAGATGATCGACGTCGTGTCGGACCTCCTCCAG CGTGGCCGCTACCGCCGGCACGACATCGAGGCGGAGCGGCCAACGATCTTGGCGGAGATG CGCGAGGTGGAGGAACTCGTGGATGAGGTGCTCATGGACAATGTGCACCAAGCCGCCTAC GACCCGACGACGAGTGGGCTGCCGCTCACAATCCTCGGACCGGTCGAGAACATCGCCAAG AACATCAACAAGTCCATGATCGAGGACTACGTGCGGGTGCACTACACAGGGCCACGCATG TGCCTCGTGTCGTCTGGCGGCATCTCGCCCGATGCGGCGCACGCGCTGGCGGAAAAATAC TTTAGTGGCCTGTCCTCCACGAACAACCGCCCGCTCCTGCGCGGTGTGTACAAGGGTGGC CACACGATTCTGTGGAACGAGGGCATGGCGACAGCGAACACGGCCGTGGCCTTCCCGATC TGCGGCGCCTCGCACCCGGACAGCTACCCGCTGCAGCTGATACACAACGTCATTGGGCAG TTTCGCGAAGGGCAGTACGACCAGTTCAGCTCCCAGCGCCGAAACCCGAACCTGCCGTGG GAGCGGGTGCCGAACCTGGTCCAGCTGCGCCCCTTCTACACGCCCTACGAGGAGACGGCG CTGCTCGGCTATCACATTGTGACGGCCCGCATGGCGACGAGCGACGTTGCCCGCGACGAC GCGCAGACACTGATGCTGAACTACGTCCTCAGCTCGCTCTACGACCTGTGTGCCACCAAG GTTGAAGACTCCCTGCTGGAGGCGGCCAAGGCGGAGTTCAAGTCGTCCGTCATGATGATG CGGGACAGCACGACGAACAGCGCCGAAGACCTCGGGCGGCAGATGATACACTTTGGCCAC CGCGTGCCGCTGCAGGAGGTGTTTGAGCGGGTCGACGCCGTCACGCCCGAGTCCCTGCGC GCCGCGGCGGAGAAGTACTTTGCCGTCGTCCAACCCACCGTCTCCTGCATCGGCGCGAGC AGCACGTTGCCCAAGTACGACCCCCTCTCGCTCGTGTCGAATGTGGTGCACCCGCAGCTG ACGCCGGCGCAGTTCCCGGAGGACGCGCGCGCGTGTCTGCTGTGA
Download Fasta

Fasta :-

MLRRTGAAAATAALPHNMTMKDPLCQRVLGRCTPVVYSSLPNGFRVATEYVKDCPFATVG VWIDAGSRFEDIRNSGVAHFLEHMNFKGTDRYSKNDVENIFEHRGAHFNAYTSRDRTAYY VKAFTKDVDKMIDVVSDLLQRGRYRRHDIEAERPTILAEMREVEELVDEVLMDNVHQAAY DPTTSGLPLTILGPVENIAKNINKSMIEDYVRVHYTGPRMCLVSSGGISPDAAHALAEKY FSGLSSTNNRPLLRGVYKGGHTILWNEGMATANTAVAFPICGASHPDSYPLQLIHNVIGQ FREGQYDQFSSQRRNPNLPWERVPNLVQLRPFYTPYEETALLGYHIVTARMATSDVARDD AQTLMLNYVLSSLYDLCATKVEDSLLEAAKAEFKSSVMMMRDSTTNSAEDLGRQMIHFGH RVPLQEVFERVDAVTPESLRAAAEKYFAVVQPTVSCIGASSTLPKYDPLSLVSNVVHPQL TPAQFPEDARACLL

MPP-like

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	LmxM.01.0650	403 S	MMRDSTTNS	0.991	unsp	LmxM.01.0650	403 S	MMRDSTTNS	0.991	unsp	LmxM.01.0650	403 S	MMRDSTTNS	0.991	unsp	LmxM.01.0650	407 S	STTNSAEDL	0.994	unsp	LmxM.01.0650	93 S	TDRYSKNDV	0.996	unsp	LmxM.01.0650	205 S	NINKSMIED	0.992	unsp

LmxM.01.0650 | mitochondrial-processing peptidase subunit beta, putative

ID's

UniProt_ID: E9AJF2

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0003824 GO:0046872

Computed_GO_Functions: catalytic activity metal ion binding

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs: GO:0020023 GO:0017087 GO:0005739

Curated_GO_Components: kinetoplast mitochondrial processing peptidase complex mitochondrion

Curated_GO_Function_IDs: GO:0004222

Curated_GO_Functions: metalloendopeptidase activity

Curated_GO_Processes: protein import into mitochondrial matrix

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

MPP-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India