LmxM.02.0710 | serine peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005739      

  • Curated_GO_Components:  mitochondrion      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.02.0710mTP0.3648870.0011690.633944CS pos: 62-63. CRW-QS. Pr: 0.3196
No Results

  • Fasta :-

    >LmxM.02.0710 MMRRHLTQASTALRCGSTAAPAARVASFMCGGTRKAPVAAVACSPLALSTAAHPALRTSC RWQSTGITPWNSSGSSGGGGNGGQQQGRTWVNPNAVPPGEFLKKYARDLTEEARMGRLDP IVGREEVIRRTIQVVSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGEVPESIKDRQVYA LDMGTLVAGAKFRGEFEERLKGVLKDTIESKGKVILFIDELHTLVGAGSSGDGSMDAANL LKPSLARGELHCIGATTLNEYRQHIEKDAALARRFQSVLVTEPTVEETISILRGIKEKYE AHHGCLIKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAASRLRLQQESKPEALDLIERE LIRLKIEAEAVKKDKDEVGKEKLENLYEQIAQKQKEYDALEERWKKEKNLFHTIKQRTED LDVLRHHLEQAMSSGDFAKAGEIQHSQIPNLLKQIEKDKHLASSQNFMVHDSVTSKDIAE VIARATGIPVAQLMTSEREKLIHMDAELKKTIMGQDTAIESITNVVRISRAGLHSHKRPL GAFLFLGPTGVGKTEVCKSLAKFLFDDESFICRIDMSEYMERHSVHRLIGAPPGYVGYEE GGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDFKNTIIILTS NIGADAIARLPEGEPSISAMPTVMEQVRNRLAPEFINRLDDIIMFNRLSRTDIRRIVEIL FAQVQKMLTEHNITLEGSTEVYDWLSVNGYSTVYGARPLKRLVQSELLNQLALMLLDGRI REGEHVKLSVRDSHVVVIANHALTPEKGPTDERLLDQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/175 Sequence name : 175 Sequence length : 817 VALUES OF COMPUTED PARAMETERS Coef20 : 4.931 CoefTot : -1.998 ChDiff : -2 ZoneTo : 99 KR : 9 DE : 0 CleavSite : 90 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.529 1.506 0.302 0.521 MesoH : 0.074 0.233 -0.146 0.149 MuHd_075 : 37.198 18.575 8.354 7.330 MuHd_095 : 31.576 20.339 8.387 7.637 MuHd_100 : 30.449 17.450 7.911 8.482 MuHd_105 : 32.997 22.713 8.282 9.165 Hmax_075 : 13.300 12.688 0.907 2.800 Hmax_095 : 11.900 10.100 3.734 3.334 Hmax_100 : 13.700 6.800 4.840 4.160 Hmax_105 : 13.400 14.700 3.862 1.768 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0156 0.9844 DFMC : 0.0046 0.9954 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0808 CMi = 0.60673 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 817 LmxM.02.0710 MMRRHLTQASTALRCGSTAAPAARVASFMCGGTRKAPVAAVACSPLALSTAAHPALRTSCRWQSTGITPWNSSGSSGGGG 80 NGGQQQGRTWVNPNAVPPGEFLKKYARDLTEEARMGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGVGKTAIVEGL 160 AQRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESKGKVILFIDELHTLVGAGSSGDGSMDAANL 240 LKPSLARGELHCIGATTLNEYRQHIEKDAALARRFQSVLVTEPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSH 320 RYLSERRLPDKAIDLIDEAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEKLENLYEQIAQKQKEYDAL 400 EERWKKEKNLFHTIKQRTEDLDVLRHHLEQAMSSGDFAKAGEIQHSQIPNLLKQIEKDKHLASSQNFMVHDSVTSKDIAE 480 VIARATGIPVAQLMTSEREKLIHMDAELKKTIMGQDTAIESITNVVRISRAGLHSHKRPLGAFLFLGPTGVGKTEVCKSL 560 AKFLFDDESFICRIDMSEYMERHSVHRLIGAPPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGH 640 LTDSHGRRVDFKNTIIILTSNIGADAIARLPEGEPSISAMPTVMEQVRNRLAPEFINRLDDIIMFNRLSRTDIRRIVEIL 720 FAQVQKMLTEHNITLEGSTEVYDWLSVNGYSTVYGARPLKRLVQSELLNQLALMLLDGRIREGEHVKLSVRDSHVVVIAN 800 HALTPEKGPTDERLLDQ 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.02.0710 3 ----MMR|RH 0.078 . LmxM.02.0710 4 ---MMRR|HL 0.179 . LmxM.02.0710 14 QASTALR|CG 0.111 . LmxM.02.0710 24 TAAPAAR|VA 0.131 . LmxM.02.0710 34 FMCGGTR|KA 0.084 . LmxM.02.0710 35 MCGGTRK|AP 0.086 . LmxM.02.0710 57 AAHPALR|TS 0.090 . LmxM.02.0710 61 ALRTSCR|WQ 0.162 . LmxM.02.0710 88 GGQQQGR|TW 0.083 . LmxM.02.0710 103 PPGEFLK|KY 0.064 . LmxM.02.0710 104 PGEFLKK|YA 0.129 . LmxM.02.0710 107 FLKKYAR|DL 0.139 . LmxM.02.0710 114 DLTEEAR|MG 0.071 . LmxM.02.0710 117 EEARMGR|LD 0.193 . LmxM.02.0710 124 LDPIVGR|EE 0.072 . LmxM.02.0710 129 GREEVIR|RT 0.110 . LmxM.02.0710 130 REEVIRR|TI 0.120 . LmxM.02.0710 137 TIQVVSR|RT 0.088 . LmxM.02.0710 138 IQVVSRR|TK 0.107 . LmxM.02.0710 140 VVSRRTK|NN 0.119 . LmxM.02.0710 153 GEPGVGK|TA 0.067 . LmxM.02.0710 163 VEGLAQR|IV 0.106 . LmxM.02.0710 166 LAQRIVK|GE 0.106 . LmxM.02.0710 174 EVPESIK|DR 0.058 . LmxM.02.0710 176 PESIKDR|QV 0.204 . LmxM.02.0710 191 TLVAGAK|FR 0.076 . LmxM.02.0710 193 VAGAKFR|GE 0.103 . LmxM.02.0710 199 RGEFEER|LK 0.092 . LmxM.02.0710 201 EFEERLK|GV 0.063 . LmxM.02.0710 205 RLKGVLK|DT 0.075 . LmxM.02.0710 211 KDTIESK|GK 0.061 . LmxM.02.0710 213 TIESKGK|VI 0.063 . LmxM.02.0710 242 DAANLLK|PS 0.059 . LmxM.02.0710 247 LKPSLAR|GE 0.087 . LmxM.02.0710 262 TTLNEYR|QH 0.079 . LmxM.02.0710 267 YRQHIEK|DA 0.083 . LmxM.02.0710 273 KDAALAR|RF 0.106 . LmxM.02.0710 274 DAALARR|FQ 0.157 . LmxM.02.0710 293 ETISILR|GI 0.080 . LmxM.02.0710 296 SILRGIK|EK 0.100 . LmxM.02.0710 298 LRGIKEK|YE 0.077 . LmxM.02.0710 308 HHGCLIK|DE 0.067 . LmxM.02.0710 321 AAVNSHR|YL 0.101 . LmxM.02.0710 326 HRYLSER|RL 0.097 . LmxM.02.0710 327 RYLSERR|LP 0.112 . LmxM.02.0710 331 ERRLPDK|AI 0.079 . LmxM.02.0710 342 IDEAASR|LR 0.073 . LmxM.02.0710 344 EAASRLR|LQ 0.077 . LmxM.02.0710 350 RLQQESK|PE 0.058 . LmxM.02.0710 359 ALDLIER|EL 0.068 . LmxM.02.0710 363 IERELIR|LK 0.088 . LmxM.02.0710 365 RELIRLK|IE 0.054 . LmxM.02.0710 372 IEAEAVK|KD 0.060 . LmxM.02.0710 373 EAEAVKK|DK 0.141 . LmxM.02.0710 375 EAVKKDK|DE 0.078 . LmxM.02.0710 380 DKDEVGK|EK 0.061 . LmxM.02.0710 382 DEVGKEK|LE 0.061 . LmxM.02.0710 393 YEQIAQK|QK 0.061 . LmxM.02.0710 395 QIAQKQK|EY 0.075 . LmxM.02.0710 403 YDALEER|WK 0.076 . LmxM.02.0710 405 ALEERWK|KE 0.060 . LmxM.02.0710 406 LEERWKK|EK 0.175 . LmxM.02.0710 408 ERWKKEK|NL 0.078 . LmxM.02.0710 415 NLFHTIK|QR 0.069 . LmxM.02.0710 417 FHTIKQR|TE 0.071 . LmxM.02.0710 425 EDLDVLR|HH 0.075 . LmxM.02.0710 439 SSGDFAK|AG 0.098 . LmxM.02.0710 453 QIPNLLK|QI 0.070 . LmxM.02.0710 457 LLKQIEK|DK 0.066 . LmxM.02.0710 459 KQIEKDK|HL 0.072 . LmxM.02.0710 476 HDSVTSK|DI 0.095 . LmxM.02.0710 484 IAEVIAR|AT 0.121 . LmxM.02.0710 498 QLMTSER|EK 0.088 . LmxM.02.0710 500 MTSEREK|LI 0.067 . LmxM.02.0710 509 HMDAELK|KT 0.066 . LmxM.02.0710 510 MDAELKK|TI 0.133 . LmxM.02.0710 527 SITNVVR|IS 0.114 . LmxM.02.0710 530 NVVRISR|AG 0.144 . LmxM.02.0710 537 AGLHSHK|RP 0.055 . LmxM.02.0710 538 GLHSHKR|PL 0.339 . LmxM.02.0710 553 GPTGVGK|TE 0.056 . LmxM.02.0710 558 GKTEVCK|SL 0.084 . LmxM.02.0710 562 VCKSLAK|FL 0.071 . LmxM.02.0710 573 DESFICR|ID 0.085 . LmxM.02.0710 582 MSEYMER|HS 0.088 . LmxM.02.0710 587 ERHSVHR|LI 0.141 . LmxM.02.0710 609 ELTESVR|RR 0.066 . LmxM.02.0710 610 LTESVRR|RP 0.097 . LmxM.02.0710 611 TESVRRR|PY 0.304 . LmxM.02.0710 623 LFDEFEK|AH 0.056 . LmxM.02.0710 647 LTDSHGR|RV 0.112 . LmxM.02.0710 648 TDSHGRR|VD 0.184 . LmxM.02.0710 652 GRRVDFK|NT 0.098 . LmxM.02.0710 669 GADAIAR|LP 0.086 . LmxM.02.0710 688 TVMEQVR|NR 0.081 . LmxM.02.0710 690 MEQVRNR|LA 0.100 . LmxM.02.0710 698 APEFINR|LD 0.091 . LmxM.02.0710 707 DIIMFNR|LS 0.076 . LmxM.02.0710 710 MFNRLSR|TD 0.193 . LmxM.02.0710 714 LSRTDIR|RI 0.103 . LmxM.02.0710 715 SRTDIRR|IV 0.301 . LmxM.02.0710 726 LFAQVQK|ML 0.072 . LmxM.02.0710 757 STVYGAR|PL 0.088 . LmxM.02.0710 760 YGARPLK|RL 0.119 . LmxM.02.0710 761 GARPLKR|LV 0.288 . LmxM.02.0710 779 LMLLDGR|IR 0.067 . LmxM.02.0710 781 LLDGRIR|EG 0.080 . LmxM.02.0710 787 REGEHVK|LS 0.059 . LmxM.02.0710 791 HVKLSVR|DS 0.109 . LmxM.02.0710 807 HALTPEK|GP 0.062 . LmxM.02.0710 813 KGPTDER|LL 0.085 . ____________________________^_________________

  • Fasta :-

    >LmxM.02.0710 ATGATGCGCAGGCATCTCACTCAGGCCTCCACGGCGCTTCGGTGTGGCAGCACCGCTGCC CCGGCGGCTCGCGTCGCCTCTTTCATGTGCGGCGGCACCCGCAAAGCTCCCGTGGCGGCT GTGGCGTGCTCGCCGCTGGCATTGAGCACTGCTGCACACCCCGCGTTGAGGACGAGCTGC CGATGGCAGTCGACAGGCATCACGCCGTGGAATAGCAGCGGCAGCAGCGGTGGAGGCGGC AACGGCGGCCAGCAGCAGGGGCGCACATGGGTGAACCCGAATGCTGTGCCACCGGGCGAG TTCCTAAAGAAGTACGCGCGCGACTTGACCGAGGAGGCGCGCATGGGTCGCCTGGACCCC ATCGTGGGGCGCGAGGAGGTCATTCGACGCACCATCCAGGTGGTCTCGCGGCGTACCAAG AACAACCCGGTGCTGATTGGTGAGCCTGGTGTCGGTAAGACGGCCATCGTCGAGGGCCTG GCGCAGCGGATCGTGAAGGGCGAGGTGCCAGAGAGCATCAAGGACCGCCAGGTGTACGCG CTAGACATGGGCACCCTCGTCGCCGGCGCCAAGTTCCGCGGCGAGTTCGAGGAGCGTCTT AAGGGAGTGCTCAAGGACACCATAGAGTCGAAAGGCAAGGTTATCTTGTTCATCGACGAG CTGCATACGCTGGTCGGCGCCGGCTCCTCCGGCGATGGGTCCATGGACGCGGCGAACCTG CTGAAGCCGTCACTGGCGCGCGGCGAGCTGCACTGCATCGGCGCCACCACCTTGAACGAG TACCGCCAGCACATCGAGAAGGACGCCGCGCTGGCGCGCCGCTTCCAGTCGGTGCTGGTT ACGGAGCCCACCGTGGAAGAGACCATCTCCATTCTGCGCGGCATCAAGGAGAAGTACGAG GCCCACCACGGCTGCCTCATCAAGGACGAGGCCCTCGTCTACGCCGCCGTCAACTCCCAC CGCTACCTCTCGGAGCGTCGCCTGCCGGACAAGGCCATCGACCTGATCGACGAGGCGGCT AGCCGCCTGCGCCTGCAGCAGGAGTCAAAGCCAGAGGCGCTCGACCTCATCGAGCGCGAG CTGATCCGCCTGAAGATCGAGGCGGAGGCGGTGAAGAAGGATAAGGACGAGGTGGGCAAG GAGAAGCTGGAGAACTTGTACGAGCAAATTGCGCAGAAGCAGAAGGAGTACGACGCGCTC GAGGAGCGGTGGAAGAAGGAGAAGAACCTGTTCCACACGATTAAGCAGCGCACCGAGGAT CTCGACGTGCTGCGGCACCACCTCGAGCAGGCGATGAGCAGCGGCGACTTTGCCAAGGCG GGCGAGATACAACACAGCCAAATCCCCAACCTACTGAAGCAGATCGAGAAGGACAAGCAC CTCGCCAGCTCCCAGAACTTCATGGTGCACGACAGCGTCACCTCAAAGGACATCGCTGAG GTGATCGCCCGCGCAACCGGCATCCCGGTGGCGCAGCTTATGACGAGTGAGCGGGAGAAG CTCATTCACATGGATGCGGAGCTAAAGAAGACGATCATGGGCCAGGATACGGCCATCGAG TCCATTACGAATGTGGTGCGCATCTCTCGCGCCGGCCTGCACTCGCACAAGCGCCCGCTG GGCGCCTTTCTGTTCCTTGGCCCCACCGGCGTCGGTAAGACGGAGGTGTGCAAGAGCCTC GCCAAGTTCCTCTTCGACGACGAGTCGTTCATCTGCCGCATCGACATGAGCGAGTACATG GAGCGGCACTCGGTGCACCGGCTGATCGGCGCCCCACCAGGGTACGTCGGCTATGAGGAA GGCGGCGAGCTGACGGAGTCGGTGCGGCGTCGTCCTTACCAAATCGTTCTCTTCGACGAG TTCGAGAAGGCCCACCCGAGCGTGTCAAACATCCTTCTCCAAGTGCTGGACGAGGGGCAC CTGACCGACAGCCACGGCCGCCGCGTCGACTTCAAGAACACCATCATCATCCTGACCTCC AACATCGGTGCCGACGCCATTGCCCGCCTGCCGGAGGGGGAGCCGAGCATCAGCGCCATG CCGACTGTCATGGAGCAGGTGCGGAATCGCCTGGCGCCCGAGTTCATTAACCGTCTCGAC GACATCATCATGTTCAACCGCCTCAGCCGCACGGACATCCGCCGCATCGTGGAGATTTTG TTCGCGCAGGTGCAGAAAATGCTGACAGAGCACAACATCACATTGGAGGGGTCCACGGAG GTGTACGACTGGCTCAGCGTCAACGGCTACAGTACTGTGTACGGCGCGCGGCCACTGAAG CGTCTCGTGCAGAGCGAACTGCTCAACCAACTGGCGCTGATGCTGCTTGATGGCCGCATC CGTGAGGGTGAGCATGTGAAGCTGTCTGTGCGGGATAGTCATGTCGTGGTGATTGCCAAT CACGCGCTCACTCCTGAGAAGGGGCCGACTGACGAGCGACTGCTGGATCAGTGA
  • Download Fasta

  • Fasta :-

    MMRRHLTQASTALRCGSTAAPAARVASFMCGGTRKAPVAAVACSPLALSTAAHPALRTSC RWQSTGITPWNSSGSSGGGGNGGQQQGRTWVNPNAVPPGEFLKKYARDLTEEARMGRLDP IVGREEVIRRTIQVVSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGEVPESIKDRQVYA LDMGTLVAGAKFRGEFEERLKGVLKDTIESKGKVILFIDELHTLVGAGSSGDGSMDAANL LKPSLARGELHCIGATTLNEYRQHIEKDAALARRFQSVLVTEPTVEETISILRGIKEKYE AHHGCLIKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAASRLRLQQESKPEALDLIERE LIRLKIEAEAVKKDKDEVGKEKLENLYEQIAQKQKEYDALEERWKKEKNLFHTIKQRTED LDVLRHHLEQAMSSGDFAKAGEIQHSQIPNLLKQIEKDKHLASSQNFMVHDSVTSKDIAE VIARATGIPVAQLMTSEREKLIHMDAELKKTIMGQDTAIESITNVVRISRAGLHSHKRPL GAFLFLGPTGVGKTEVCKSLAKFLFDDESFICRIDMSEYMERHSVHRLIGAPPGYVGYEE GGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDFKNTIIILTS NIGADAIARLPEGEPSISAMPTVMEQVRNRLAPEFINRLDDIIMFNRLSRTDIRRIVEIL FAQVQKMLTEHNITLEGSTEVYDWLSVNGYSTVYGARPLKRLVQSELLNQLALMLLDGRI REGEHVKLSVRDSHVVVIANHALTPEKGPTDERLLDQ

  • title: ATP binding site
  • coordinates: E148,P149,G150,V151,G152,K153,T154,A155,D219,T257
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.02.0710535 SAGLHSHKRP0.995unspLmxM.02.0710535 SAGLHSHKRP0.995unspLmxM.02.0710535 SAGLHSHKRP0.995unspLmxM.02.0710584 SMERHSVHRL0.995unspLmxM.02.0710709 SFNRLSRTDI0.996unspLmxM.02.0710789 SHVKLSVRDS0.997unspLmxM.02.0710172 SEVPESIKDR0.997unspLmxM.02.0710324 SHRYLSERRL0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India