LmxM.02.0740 | peptidyl dipeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.02.0740OTHER0.9998580.0000380.000104
No Results

  • Fasta :-

    >LmxM.02.0740 MSANPLLQQSTLQYQYPPFDQITVEHYAPAFEQGMAEQMAEIEAIKSNPDAPTFENTVVA LERSGGQLRRARLVFQNLCSAHTNPDMQNLEQAYAPKFSLHTDKIYLDSALYNRIKAVYD ERASLAGEDLRLVEHYEEEFRKAGAALHDADKEKLKQVNERLATLESDFTKKVTDTRKTA SLIVDDVAELEGLSEDEIATAQREAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRTGRGDENDTGAIIVEIAQLRLKKAKLLGKKSFAEWQLQNQMADPASAEALLRDM GKAAASKVKKEAADIKRMIREEGGDFELAPWDWGYYAERVRKQQYDLDENETKPYFELNN VLERGVFHTAEKLYGVTMRRRTDLPVYHPDVMTFEMFDCTGDSLAIFCLDPYARASKRGG AWMTFYVRQSTLLGQKPVVYNVLNIVKPAEGKPALLSRNDVTTLFHEFGHGLHGMLSNLK YSTLSGTNVARDFLEFPSQINEHWATYDAVLRNYALHYETKEPIPQALVDRMKAAETHGA GFHTIEVVKAAYLDLCWHLVAEETAVLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTF SGAYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKASMKAFLRLHGLLEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/848 Sequence name : 848 Sequence length : 678 VALUES OF COMPUTED PARAMETERS Coef20 : 3.162 CoefTot : -1.096 ChDiff : -18 ZoneTo : 19 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.724 1.182 0.020 0.452 MesoH : -0.342 0.163 -0.389 0.232 MuHd_075 : 22.204 19.156 6.939 4.825 MuHd_095 : 11.622 9.313 3.837 2.467 MuHd_100 : 7.322 5.916 3.430 1.785 MuHd_105 : 7.541 8.690 3.057 2.027 Hmax_075 : 11.112 7.788 0.845 3.579 Hmax_095 : 7.612 3.675 0.311 2.590 Hmax_100 : 6.700 4.100 0.106 3.140 Hmax_105 : 4.083 4.083 -1.016 2.228 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9589 0.0411 DFMC : 0.9454 0.0546
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 678 LmxM.02.0740 MSANPLLQQSTLQYQYPPFDQITVEHYAPAFEQGMAEQMAEIEAIKSNPDAPTFENTVVALERSGGQLRRARLVFQNLCS 80 AHTNPDMQNLEQAYAPKFSLHTDKIYLDSALYNRIKAVYDERASLAGEDLRLVEHYEEEFRKAGAALHDADKEKLKQVNE 160 RLATLESDFTKKVTDTRKTASLIVDDVAELEGLSEDEIATAQREAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF 240 EASVQRTGRGDENDTGAIIVEIAQLRLKKAKLLGKKSFAEWQLQNQMADPASAEALLRDMGKAAASKVKKEAADIKRMIR 320 EEGGDFELAPWDWGYYAERVRKQQYDLDENETKPYFELNNVLERGVFHTAEKLYGVTMRRRTDLPVYHPDVMTFEMFDCT 400 GDSLAIFCLDPYARASKRGGAWMTFYVRQSTLLGQKPVVYNVLNIVKPAEGKPALLSRNDVTTLFHEFGHGLHGMLSNLK 480 YSTLSGTNVARDFLEFPSQINEHWATYDAVLRNYALHYETKEPIPQALVDRMKAAETHGAGFHTIEVVKAAYLDLCWHLV 560 AEETAVLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTFSGAYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLR 640 ACVLSVGNSVDANVAYEKFAGRKASMKAFLRLHGLLEE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.02.0740 46 AEIEAIK|SN 0.076 . LmxM.02.0740 63 TVVALER|SG 0.155 . LmxM.02.0740 69 RSGGQLR|RA 0.094 . LmxM.02.0740 70 SGGQLRR|AR 0.110 . LmxM.02.0740 72 GQLRRAR|LV 0.451 . LmxM.02.0740 97 EQAYAPK|FS 0.065 . LmxM.02.0740 104 FSLHTDK|IY 0.060 . LmxM.02.0740 114 DSALYNR|IK 0.071 . LmxM.02.0740 116 ALYNRIK|AV 0.096 . LmxM.02.0740 122 KAVYDER|AS 0.092 . LmxM.02.0740 131 LAGEDLR|LV 0.133 . LmxM.02.0740 141 HYEEEFR|KA 0.132 . LmxM.02.0740 142 YEEEFRK|AG 0.078 . LmxM.02.0740 152 ALHDADK|EK 0.061 . LmxM.02.0740 154 HDADKEK|LK 0.073 . LmxM.02.0740 156 ADKEKLK|QV 0.093 . LmxM.02.0740 161 LKQVNER|LA 0.100 . LmxM.02.0740 171 LESDFTK|KV 0.110 . LmxM.02.0740 172 ESDFTKK|VT 0.096 . LmxM.02.0740 177 KKVTDTR|KT 0.079 . LmxM.02.0740 178 KVTDTRK|TA 0.095 . LmxM.02.0740 203 EIATAQR|EA 0.113 . LmxM.02.0740 213 SLGHPGK|YA 0.096 . LmxM.02.0740 231 PLLASLR|SR 0.103 . LmxM.02.0740 233 LASLRSR|ET 0.112 . LmxM.02.0740 236 LRSRETR|RR 0.219 . LmxM.02.0740 237 RSRETRR|RL 0.144 . LmxM.02.0740 238 SRETRRR|LF 0.186 . LmxM.02.0740 246 FEASVQR|TG 0.087 . LmxM.02.0740 249 SVQRTGR|GD 0.314 . LmxM.02.0740 266 VEIAQLR|LK 0.081 . LmxM.02.0740 268 IAQLRLK|KA 0.059 . LmxM.02.0740 269 AQLRLKK|AK 0.217 . LmxM.02.0740 271 LRLKKAK|LL 0.099 . LmxM.02.0740 275 KAKLLGK|KS 0.061 . LmxM.02.0740 276 AKLLGKK|SF 0.111 . LmxM.02.0740 298 SAEALLR|DM 0.137 . LmxM.02.0740 302 LLRDMGK|AA 0.083 . LmxM.02.0740 307 GKAAASK|VK 0.061 . LmxM.02.0740 309 AAASKVK|KE 0.067 . LmxM.02.0740 310 AASKVKK|EA 0.215 . LmxM.02.0740 316 KEAADIK|RM 0.068 . LmxM.02.0740 317 EAADIKR|MI 0.262 . LmxM.02.0740 320 DIKRMIR|EE 0.191 . LmxM.02.0740 339 WGYYAER|VR 0.074 . LmxM.02.0740 341 YYAERVR|KQ 0.073 . LmxM.02.0740 342 YAERVRK|QQ 0.184 . LmxM.02.0740 353 LDENETK|PY 0.065 . LmxM.02.0740 364 LNNVLER|GV 0.130 . LmxM.02.0740 372 VFHTAEK|LY 0.061 . LmxM.02.0740 379 LYGVTMR|RR 0.088 . LmxM.02.0740 380 YGVTMRR|RT 0.092 . LmxM.02.0740 381 GVTMRRR|TD 0.104 . LmxM.02.0740 414 CLDPYAR|AS 0.111 . LmxM.02.0740 417 PYARASK|RG 0.114 . LmxM.02.0740 418 YARASKR|GG 0.204 . LmxM.02.0740 428 WMTFYVR|QS 0.067 . LmxM.02.0740 436 STLLGQK|PV 0.059 . LmxM.02.0740 447 NVLNIVK|PA 0.066 . LmxM.02.0740 452 VKPAEGK|PA 0.062 . LmxM.02.0740 458 KPALLSR|ND 0.103 . LmxM.02.0740 480 GMLSNLK|YS 0.058 . LmxM.02.0740 491 SGTNVAR|DF 0.117 . LmxM.02.0740 512 TYDAVLR|NY 0.074 . LmxM.02.0740 521 ALHYETK|EP 0.067 . LmxM.02.0740 531 PQALVDR|MK 0.107 . LmxM.02.0740 533 ALVDRMK|AA 0.093 . LmxM.02.0740 549 HTIEVVK|AA 0.070 . LmxM.02.0740 578 MEEAAMR|SF 0.214 . LmxM.02.0740 590 MTEVPPR|YH 0.162 . LmxM.02.0740 615 YVYQWAR|VL 0.088 . LmxM.02.0740 633 ENGGLTR|EN 0.116 . LmxM.02.0740 640 ENGDHLR|AC 0.082 . LmxM.02.0740 658 ANVAYEK|FA 0.086 . LmxM.02.0740 662 YEKFAGR|KA 0.098 . LmxM.02.0740 663 EKFAGRK|AS 0.085 . LmxM.02.0740 667 GRKASMK|AF 0.067 . LmxM.02.0740 671 SMKAFLR|LH 0.087 . ____________________________^_________________

  • Fasta :-

    >LmxM.02.0740 ATGTCCGCCAACCCTCTGCTTCAGCAGAGCACTCTGCAGTACCAATACCCGCCCTTTGAC CAGATCACTGTGGAGCACTACGCACCCGCATTCGAGCAGGGCATGGCGGAGCAGATGGCG GAGATCGAGGCGATCAAGTCCAACCCTGACGCACCTACCTTTGAAAACACAGTTGTGGCA CTGGAGCGGAGCGGGGGGCAGCTTAGGCGCGCACGCCTGGTCTTCCAAAACCTCTGCTCT GCACACACGAACCCGGACATGCAAAATCTCGAGCAAGCCTACGCCCCAAAGTTCTCCCTC CATACAGACAAGATCTACCTTGATAGCGCCTTGTACAACCGCATCAAGGCTGTGTACGAC GAGCGTGCCAGTCTCGCTGGTGAAGACTTGCGGCTGGTGGAGCATTACGAGGAGGAGTTT CGCAAGGCCGGTGCCGCCCTTCACGATGCGGACAAGGAGAAGCTGAAGCAGGTGAATGAG CGCCTCGCCACCCTCGAGAGTGATTTTACCAAGAAGGTGACGGACACGCGCAAGACCGCC TCGCTCATCGTGGATGACGTCGCCGAGCTGGAGGGCCTCAGCGAGGACGAGATTGCGACG GCTCAGAGGGAGGCGGAGAGCCTCGGGCACCCTGGAAAGTACGCATTGATTATCGTGAAC ACGACTCAGCAGCCGCTGCTGGCGTCTCTGCGGAGCCGCGAGACGCGCCGCCGCCTGTTC GAGGCGAGCGTGCAGCGCACTGGACGCGGTGACGAGAATGACACCGGCGCCATCATCGTG GAGATTGCGCAGCTTCGACTGAAGAAGGCGAAGCTGCTCGGCAAGAAGAGCTTCGCTGAG TGGCAGCTCCAGAACCAGATGGCCGATCCGGCATCTGCGGAGGCCTTGCTGCGCGATATG GGCAAAGCAGCGGCGTCGAAGGTGAAGAAGGAGGCGGCTGACATCAAGCGAATGATTCGC GAGGAGGGTGGGGACTTCGAGCTGGCGCCCTGGGACTGGGGCTACTACGCGGAGAGGGTG CGCAAGCAGCAATACGACCTCGACGAAAACGAGACGAAGCCGTACTTTGAACTAAACAAC GTGCTTGAGCGTGGCGTGTTCCACACAGCGGAGAAGCTGTACGGCGTGACGATGCGGCGG CGCACGGATCTGCCGGTGTACCACCCCGACGTGATGACGTTTGAGATGTTTGACTGCACG GGTGACTCTCTCGCCATTTTCTGCCTCGACCCGTACGCGCGCGCAAGCAAGCGCGGTGGT GCATGGATGACCTTCTATGTTCGCCAGAGCACTCTCCTTGGCCAGAAGCCGGTCGTGTAC AATGTGCTGAACATTGTGAAGCCCGCGGAAGGCAAGCCAGCCTTGCTGAGCCGCAATGAT GTGACGACACTCTTTCACGAGTTCGGCCACGGACTTCATGGCATGCTAAGCAACCTCAAG TACTCGACTCTTTCAGGCACAAACGTCGCCCGCGACTTCCTCGAGTTTCCATCGCAGATC AACGAGCACTGGGCTACGTACGACGCCGTGCTGAGGAACTACGCCCTTCACTATGAAACC AAGGAGCCGATCCCTCAGGCGCTGGTGGATCGCATGAAGGCGGCCGAGACACACGGCGCC GGCTTTCACACCATTGAAGTGGTCAAGGCGGCGTACCTCGATCTCTGCTGGCACCTGGTT GCGGAGGAAACGGCTGTGCTGCCACCGGCACAGATGGAAGAGGCGGCGATGAGGTCCTTT GGTGTTGGGATGACTGAGGTGCCGCCACGCTACCACAGCGGGTACTTCATGCACACTTTC TCTGGCGCATATGCCTCGAACTACTACGTGTACCAGTGGGCGCGTGTGCTGGACTGCGAC GGGTTCGAGTGGTTCCTGGAGAACGGGGGACTGACGCGCGAGAACGGTGACCACCTGCGC GCGTGCGTGCTCTCTGTGGGCAACTCGGTGGACGCAAACGTTGCGTACGAGAAGTTCGCC GGCCGAAAGGCAAGCATGAAGGCGTTCCTGCGTCTCCACGGCCTGCTGGAGGAATAG
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  • Fasta :-

    MSANPLLQQSTLQYQYPPFDQITVEHYAPAFEQGMAEQMAEIEAIKSNPDAPTFENTVVA LERSGGQLRRARLVFQNLCSAHTNPDMQNLEQAYAPKFSLHTDKIYLDSALYNRIKAVYD ERASLAGEDLRLVEHYEEEFRKAGAALHDADKEKLKQVNERLATLESDFTKKVTDTRKTA SLIVDDVAELEGLSEDEIATAQREAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRTGRGDENDTGAIIVEIAQLRLKKAKLLGKKSFAEWQLQNQMADPASAEALLRDM GKAAASKVKKEAADIKRMIREEGGDFELAPWDWGYYAERVRKQQYDLDENETKPYFELNN VLERGVFHTAEKLYGVTMRRRTDLPVYHPDVMTFEMFDCTGDSLAIFCLDPYARASKRGG AWMTFYVRQSTLLGQKPVVYNVLNIVKPAEGKPALLSRNDVTTLFHEFGHGLHGMLSNLK YSTLSGTNVARDFLEFPSQINEHWATYDAVLRNYALHYETKEPIPQALVDRMKAAETHGA GFHTIEVVKAAYLDLCWHLVAEETAVLPPAQMEEAAMRSFGVGMTEVPPRYHSGYFMHTF SGAYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKASMKAFLRLHGLLEE

  • title: Zn binding site
  • coordinates: H466,H470,E495
No Results
No Results
IDSitePeptideScoreMethod
LmxM.02.0740416 SYARASKRGG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India