LmxM.04.0450 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.04.0450OTHER0.9997470.0001210.000132
No Results

  • Fasta :-

    >LmxM.04.0450 MRAGSQYPEEEPAGPPPPPVMNAFMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIATAQ KPVYENPENPASAAGATAPKVRFVNGEPDVTGEVTNCFEEPGLLYRIVDRPNKMWSFYND SRSFEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELTVYPGETEPFIKGFVNGFASK LSALPLSQEYFQARSEAQNRQVVQVEMDAIRAITGDETDAERILQVCLENGLPFVDLSFP PVQSSIESGASKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAV ATQAEDPKVVMQMFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAF AHSRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVTKATVHSG HDLESRMIQWQRKGYQTILTTSGKAPAIPADAQSLPDFSDQPEMEEAFAGTGFLPGHAYS VLDVKEFQKGQIRLVCLRNPWVYGSGWTRAWAWDSLEWQQHRDIATACGFPNHKGDTSIV WMTFEDALKYFIGGGVLFRAPAAHDARVPITFADCKPGAVFQVSVKAPTDVTFILSNMDH RGMHVDEAGAAESDPNNMDYPPVMLSLAAPVPNETDVYHVVQNSSADMTQPSDNAWLFLQ AREIAMTCHLEPSAAPYLLIPRLMEGDETVSNGNGGGEDMRDFVHSIYYVNDHVHPVRNA SSVKAKEVAVTVGFEADEEIGDNVAVIMCKIGESNAVFENFPKFPTDDVEPHEEELYFQT KESSCGYPQEKAGTAIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/256 Sequence name : 256 Sequence length : 797 VALUES OF COMPUTED PARAMETERS Coef20 : 2.061 CoefTot : -0.427 ChDiff : -40 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.300 0.025 0.598 MesoH : -0.366 0.372 -0.330 0.248 MuHd_075 : 17.298 8.843 5.475 3.850 MuHd_095 : 22.001 6.549 5.275 3.977 MuHd_100 : 18.613 4.316 4.242 3.973 MuHd_105 : 16.203 5.798 3.717 4.163 Hmax_075 : 3.400 -3.200 -1.110 2.200 Hmax_095 : 4.200 -5.075 -1.627 1.420 Hmax_100 : 4.200 -5.700 -1.627 1.420 Hmax_105 : -3.587 -3.733 -3.016 1.587 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9865 0.0135 DFMC : 0.9704 0.0296
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 797 LmxM.04.0450 MRAGSQYPEEEPAGPPPPPVMNAFMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIATAQKPVYENPENPASAAGATAPK 80 VRFVNGEPDVTGEVTNCFEEPGLLYRIVDRPNKMWSFYNDSRSFEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELT 160 VYPGETEPFIKGFVNGFASKLSALPLSQEYFQARSEAQNRQVVQVEMDAIRAITGDETDAERILQVCLENGLPFVDLSFP 240 PVQSSIESGASKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVATQAEDPKVVMQMFRHPKGA 320 DSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAFAHSRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDM 400 TGFPAMRIDEMVTKATVHSGHDLESRMIQWQRKGYQTILTTSGKAPAIPADAQSLPDFSDQPEMEEAFAGTGFLPGHAYS 480 VLDVKEFQKGQIRLVCLRNPWVYGSGWTRAWAWDSLEWQQHRDIATACGFPNHKGDTSIVWMTFEDALKYFIGGGVLFRA 560 PAAHDARVPITFADCKPGAVFQVSVKAPTDVTFILSNMDHRGMHVDEAGAAESDPNNMDYPPVMLSLAAPVPNETDVYHV 640 VQNSSADMTQPSDNAWLFLQAREIAMTCHLEPSAAPYLLIPRLMEGDETVSNGNGGGEDMRDFVHSIYYVNDHVHPVRNA 720 SSVKAKEVAVTVGFEADEEIGDNVAVIMCKIGESNAVFENFPKFPTDDVEPHEEELYFQTKESSCGYPQEKAGTAIY 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.04.0450 2 -----MR|AG 0.115 . LmxM.04.0450 26 VMNAFMK|PR 0.071 . LmxM.04.0450 28 NAFMKPR|KT 0.116 . LmxM.04.0450 29 AFMKPRK|TA 0.092 . LmxM.04.0450 33 PRKTATK|PP 0.065 . LmxM.04.0450 36 TATKPPR|EW 0.122 . LmxM.04.0450 61 DIATAQK|PV 0.076 . LmxM.04.0450 80 AGATAPK|VR 0.058 . LmxM.04.0450 82 ATAPKVR|FV 0.204 . LmxM.04.0450 106 EPGLLYR|IV 0.121 . LmxM.04.0450 110 LYRIVDR|PN 0.076 . LmxM.04.0450 113 IVDRPNK|MW 0.129 . LmxM.04.0450 122 SFYNDSR|SF 0.128 . LmxM.04.0450 134 VVCTFGK|HS 0.060 . LmxM.04.0450 137 TFGKHSK|IT 0.065 . LmxM.04.0450 145 TPLENTK|MT 0.071 . LmxM.04.0450 148 ENTKMTR|DE 0.126 . LmxM.04.0450 171 ETEPFIK|GF 0.070 . LmxM.04.0450 180 VNGFASK|LS 0.058 . LmxM.04.0450 194 QEYFQAR|SE 0.156 . LmxM.04.0450 200 RSEAQNR|QV 0.207 . LmxM.04.0450 211 VEMDAIR|AI 0.102 . LmxM.04.0450 222 DETDAER|IL 0.075 . LmxM.04.0450 252 IESGASK|PF 0.065 . LmxM.04.0450 255 GASKPFK|RL 0.092 . LmxM.04.0450 256 ASKPFKR|LP 0.181 . LmxM.04.0450 261 KRLPWGR|PR 0.100 . LmxM.04.0450 263 LPWGRPR|MY 0.101 . LmxM.04.0450 267 RPRMYVK|PE 0.064 . LmxM.04.0450 275 ELHDQIR|LF 0.079 . LmxM.04.0450 278 DQIRLFR|NR 0.147 . LmxM.04.0450 280 IRLFRNR|IC 0.098 . LmxM.04.0450 308 TQAEDPK|VV 0.094 . LmxM.04.0450 315 VVMQMFR|HP 0.086 . LmxM.04.0450 318 QMFRHPK|GA 0.249 . LmxM.04.0450 324 KGADSAR|CE 0.130 . LmxM.04.0450 327 DSARCER|AI 0.444 . LmxM.04.0450 333 RAIGAYR|VS 0.077 . LmxM.04.0450 338 YRVSFNK|NG 0.053 . LmxM.04.0450 343 NKNGLWR|SI 0.120 . LmxM.04.0450 364 PAFAHSR|DL 0.111 . LmxM.04.0450 376 WPAVLEK|AF 0.081 . LmxM.04.0450 380 LEKAFAK|MH 0.078 . LmxM.04.0450 407 TGFPAMR|ID 0.096 . LmxM.04.0450 414 IDEMVTK|AT 0.074 . LmxM.04.0450 426 GHDLESR|MI 0.107 . LmxM.04.0450 432 RMIQWQR|KG 0.089 . LmxM.04.0450 433 MIQWQRK|GY 0.140 . LmxM.04.0450 444 ILTTSGK|AP 0.058 . LmxM.04.0450 485 YSVLDVK|EF 0.062 . LmxM.04.0450 489 DVKEFQK|GQ 0.060 . LmxM.04.0450 493 FQKGQIR|LV 0.092 . LmxM.04.0450 498 IRLVCLR|NP 0.085 . LmxM.04.0450 509 YGSGWTR|AW 0.085 . LmxM.04.0450 522 LEWQQHR|DI 0.119 . LmxM.04.0450 534 CGFPNHK|GD 0.063 . LmxM.04.0450 549 TFEDALK|YF 0.068 . LmxM.04.0450 559 GGGVLFR|AP 0.082 . LmxM.04.0450 567 PAAHDAR|VP 0.084 . LmxM.04.0450 576 ITFADCK|PG 0.059 . LmxM.04.0450 586 VFQVSVK|AP 0.065 . LmxM.04.0450 601 LSNMDHR|GM 0.115 . LmxM.04.0450 662 WLFLQAR|EI 0.087 . LmxM.04.0450 682 PYLLIPR|LM 0.073 . LmxM.04.0450 701 GGGEDMR|DF 0.103 . LmxM.04.0450 718 DHVHPVR|NA 0.103 . LmxM.04.0450 724 RNASSVK|AK 0.079 . LmxM.04.0450 726 ASSVKAK|EV 0.124 . LmxM.04.0450 750 VAVIMCK|IG 0.060 . LmxM.04.0450 763 VFENFPK|FP 0.064 . LmxM.04.0450 781 ELYFQTK|ES 0.082 . LmxM.04.0450 791 CGYPQEK|AG 0.065 . ____________________________^_________________

  • Fasta :-

    >LmxM.04.0450 ATGCGCGCCGGCTCGCAGTACCCTGAGGAAGAGCCGGCCGGGCCGCCGCCGCCGCCGGTA ATGAATGCCTTCATGAAGCCACGCAAGACTGCCACGAAGCCGCCACGGGAGTGGGTCCCA GTGAACCTGCAGGTGCCTGAGGAAGACCCGGAGGACGAGTTCGACATTGCCACCGCGCAG AAGCCCGTGTACGAGAACCCGGAAAACCCCGCGTCTGCCGCTGGTGCTACTGCCCCAAAG GTGCGGTTCGTGAACGGCGAGCCCGACGTCACGGGCGAGGTGACGAACTGCTTCGAGGAG CCCGGGCTGCTCTACCGCATCGTCGACCGGCCCAACAAGATGTGGTCCTTCTACAACGAC AGCCGCTCCTTCGAGGTGCACGTCGTGTGCACCTTTGGCAAGCACAGCAAGATCACGCCG CTCGAAAACACGAAGATGACGCGTGATGAAAACACGGGCGAGTACGTGATGGAGTTGACC GTCTACCCTGGCGAGACGGAGCCCTTCATCAAGGGCTTCGTGAACGGCTTCGCGAGCAAG CTGAGCGCGCTGCCGCTGTCGCAGGAGTACTTCCAAGCCCGCAGCGAGGCACAAAATCGG CAGGTTGTGCAGGTGGAGATGGACGCCATCCGCGCCATCACCGGCGACGAGACGGATGCG GAGCGCATTCTGCAGGTCTGCCTGGAGAACGGCCTTCCCTTTGTCGACCTCTCCTTCCCG CCTGTGCAGTCGTCCATCGAGTCGGGGGCGTCGAAGCCGTTCAAGCGGCTGCCGTGGGGC CGGCCACGCATGTACGTGAAGCCGGAGCTGCACGATCAGATTCGACTCTTCCGCAACCGC ATCTGCCCCGGCGAGGTCGAGCAGGGCGAGCTGGGCGACTGCTGGCTCATGTGTGCAGTG GCCACGCAGGCCGAGGACCCGAAAGTGGTCATGCAAATGTTCCGGCACCCGAAGGGCGCC GACTCGGCGCGGTGCGAGCGCGCGATCGGTGCGTACCGCGTGTCCTTCAACAAGAACGGC CTCTGGCGTAGCATCCTTGTGGATGACTACTTTCCCGTCATCGCCGGCGCGCCGGCCTTC GCGCACAGCCGCGACCTGTGCGAGCTGTGGCCGGCAGTTCTCGAGAAGGCGTTTGCCAAG ATGCACGGCAGCTACGCTATGATCCAGTCGGGTGACCCGATGCACGCACTGACGGACATG ACGGGCTTCCCGGCCATGCGCATCGACGAAATGGTCACCAAGGCAACCGTCCATAGCGGC CACGACCTGGAGTCGAGGATGATCCAGTGGCAAAGGAAGGGCTACCAGACCATCCTCACG ACGTCCGGCAAGGCGCCGGCGATCCCGGCGGACGCGCAGAGCTTGCCGGACTTCTCCGAC CAGCCCGAGATGGAGGAGGCGTTCGCCGGCACCGGCTTCCTGCCCGGCCACGCCTACTCC GTGCTGGATGTGAAGGAGTTCCAGAAGGGCCAGATACGCCTGGTATGCCTGCGCAACCCG TGGGTGTACGGTAGCGGCTGGACGAGGGCGTGGGCGTGGGATTCCCTGGAGTGGCAACAG CACCGCGATATCGCCACCGCGTGCGGCTTCCCCAACCACAAGGGCGACACTAGCATCGTC TGGATGACCTTTGAGGATGCGCTCAAGTACTTCATCGGCGGTGGTGTACTTTTCCGCGCG CCGGCAGCGCACGACGCGCGCGTGCCCATTACCTTCGCCGACTGCAAGCCCGGCGCCGTC TTTCAGGTGTCGGTGAAGGCGCCGACGGACGTCACGTTCATCTTGTCGAACATGGACCAC CGCGGCATGCACGTCGACGAGGCGGGTGCGGCCGAGTCCGACCCGAACAACATGGACTAC CCGCCCGTGATGTTGTCGCTTGCCGCGCCGGTGCCGAACGAAACGGACGTGTACCACGTC GTGCAGAACTCCTCGGCTGACATGACGCAGCCATCGGACAACGCGTGGCTGTTCCTGCAG GCGCGCGAGATTGCCATGACGTGCCACCTGGAGCCGAGTGCCGCGCCGTATCTGCTCATT CCGCGCCTCATGGAGGGCGACGAGACTGTCAGCAACGGCAACGGCGGAGGCGAGGACATG CGCGATTTTGTACACTCCATCTACTACGTGAACGACCACGTCCACCCTGTGCGGAACGCG TCAAGCGTGAAGGCGAAGGAGGTAGCCGTAACCGTGGGGTTCGAGGCGGATGAGGAGATC GGTGACAACGTCGCCGTGATCATGTGCAAGATAGGCGAGAGCAACGCCGTCTTCGAGAAC TTTCCAAAGTTCCCGACGGATGACGTGGAGCCGCACGAGGAGGAGCTGTACTTCCAGACG AAGGAGAGCAGCTGCGGCTATCCGCAGGAGAAGGCCGGCACGGCCATCTACTGA
  • Download Fasta

  • Fasta :-

    MRAGSQYPEEEPAGPPPPPVMNAFMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIATAQ KPVYENPENPASAAGATAPKVRFVNGEPDVTGEVTNCFEEPGLLYRIVDRPNKMWSFYND SRSFEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELTVYPGETEPFIKGFVNGFASK LSALPLSQEYFQARSEAQNRQVVQVEMDAIRAITGDETDAERILQVCLENGLPFVDLSFP PVQSSIESGASKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAV ATQAEDPKVVMQMFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAF AHSRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVTKATVHSG HDLESRMIQWQRKGYQTILTTSGKAPAIPADAQSLPDFSDQPEMEEAFAGTGFLPGHAYS VLDVKEFQKGQIRLVCLRNPWVYGSGWTRAWAWDSLEWQQHRDIATACGFPNHKGDTSIV WMTFEDALKYFIGGGVLFRAPAAHDARVPITFADCKPGAVFQVSVKAPTDVTFILSNMDH RGMHVDEAGAAESDPNNMDYPPVMLSLAAPVPNETDVYHVVQNSSADMTQPSDNAWLFLQ AREIAMTCHLEPSAAPYLLIPRLMEGDETVSNGNGGGEDMRDFVHSIYYVNDHVHPVRNA SSVKAKEVAVTVGFEADEEIGDNVAVIMCKIGESNAVFENFPKFPTDDVEPHEEELYFQT KESSCGYPQEKAGTAIY

  • title: catalytic site
  • coordinates: C294,H477,N499
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.04.0450322 SKGADSARCE0.992unspLmxM.04.0450419 SATVHSGHDL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India