LmxM.05.0950 | glutaminyl cyclase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LmxM.05.0950OTHER0.9834890.0035040.013007
No Results

  • Fasta :-

    >LmxM.05.0950 MQQHQSLAARRRSRRLFRRDEAPFWCSLLKRCLPCLALRWKSTRATSRARAILMGILLCL IATLISLIGLLVYLSWKSSPSHPPLEAVAAPSTPSPRMPSEAGMHNPLAEDSVDVAVIRQ QEEAVVRKWRENDFRPTYWEVKRRTLPRLTKKVLESWFEHGRRAAASATAVEVPEDVLTA HTWDAVDGGDADADLFDTLAFLYPPAQQSQYYRAAMDAILRHGPRVGGTKRDALLHHFVD EGLGRRRYDAARHAYHPAPPHLSPRGRELLEKVATSWPDAPHLAAAPQDEAAARQPGWRW SLSWDNFTANIPLRIEGSSRVEMQNLVFQFPGGSQFRRKQAAAASAAATGAKDALDEFVG GVPNRRRTRAEDRKEVLEAEYHPADMTGETVYTQENFLQWAQDGVPFSPRPALERGVPGT RVVLSPDAKGARVPLKPSLSAQAAEPATQQPMKHAVLAAHWDSKYFADLPFLGACDSAMP VVFLLRTIKNIAVLTDVAEALKESYKAERSGAVDGDPAAAVPGLTSTFRNATTEAEVRER LASLLSPAHHALLYQYFFARPYSVGDEQQNLVAAGMRNHPTKVEVDVRTWLDWVQHLPII SVILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRTRYSGGPQSLYDSVDLFALYDL MGPAGTTFSNMYPTQSGIFYAGLSQREWELRHRAMKYTSAISAELLWRYHEATALPPAEA RRKPDPFLRLLGPSPHEAVASINAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMFTLH SVPRTTYDVRFVENFDQLRVYDRLDRAIAAESSFDAERYLSTINHNIFFSPSQQADLRRN RDVFVAEDDHKHWLDTQRVLHLIPIPFPKSWHTASDDGSNVHDGTSTDLAGLLWSTVLEL GDYWTRKE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/673 Sequence name : 673 Sequence length : 908 VALUES OF COMPUTED PARAMETERS Coef20 : 5.097 CoefTot : 0.991 ChDiff : 3 ZoneTo : 19 KR : 7 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.476 3.012 0.647 0.915 MesoH : 0.186 0.742 -0.117 0.313 MuHd_075 : 33.050 16.888 7.181 7.687 MuHd_095 : 45.113 17.347 9.455 9.236 MuHd_100 : 38.993 12.995 8.274 7.491 MuHd_105 : 35.164 13.722 7.707 6.955 Hmax_075 : -11.900 -4.900 -5.910 -1.490 Hmax_095 : 1.100 2.888 -2.549 0.860 Hmax_100 : 1.100 -0.200 -2.549 0.860 Hmax_105 : -7.100 -1.200 -3.484 -0.790 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0813 0.9187 DFMC : 0.1425 0.8575 This protein is probably imported in mitochondria. f(Ser) = 0.1053 f(Arg) = 0.3684 CMi = 0.17969 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 908 LmxM.05.0950 MQQHQSLAARRRSRRLFRRDEAPFWCSLLKRCLPCLALRWKSTRATSRARAILMGILLCLIATLISLIGLLVYLSWKSSP 80 SHPPLEAVAAPSTPSPRMPSEAGMHNPLAEDSVDVAVIRQQEEAVVRKWRENDFRPTYWEVKRRTLPRLTKKVLESWFEH 160 GRRAAASATAVEVPEDVLTAHTWDAVDGGDADADLFDTLAFLYPPAQQSQYYRAAMDAILRHGPRVGGTKRDALLHHFVD 240 EGLGRRRYDAARHAYHPAPPHLSPRGRELLEKVATSWPDAPHLAAAPQDEAAARQPGWRWSLSWDNFTANIPLRIEGSSR 320 VEMQNLVFQFPGGSQFRRKQAAAASAAATGAKDALDEFVGGVPNRRRTRAEDRKEVLEAEYHPADMTGETVYTQENFLQW 400 AQDGVPFSPRPALERGVPGTRVVLSPDAKGARVPLKPSLSAQAAEPATQQPMKHAVLAAHWDSKYFADLPFLGACDSAMP 480 VVFLLRTIKNIAVLTDVAEALKESYKAERSGAVDGDPAAAVPGLTSTFRNATTEAEVRERLASLLSPAHHALLYQYFFAR 560 PYSVGDEQQNLVAAGMRNHPTKVEVDVRTWLDWVQHLPIISVILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRTR 640 YSGGPQSLYDSVDLFALYDLMGPAGTTFSNMYPTQSGIFYAGLSQREWELRHRAMKYTSAISAELLWRYHEATALPPAEA 720 RRKPDPFLRLLGPSPHEAVASINAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMFTLHSVPRTTYDVRFVENFDQLRV 800 YDRLDRAIAAESSFDAERYLSTINHNIFFSPSQQADLRRNRDVFVAEDDHKHWLDTQRVLHLIPIPFPKSWHTASDDGSN 880 VHDGTSTDLAGLLWSTVLELGDYWTRKE 960 ..............P................................................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ........................................P....................................... 880 ............................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LmxM.05.0950 10 HQSLAAR|RR 0.102 . LmxM.05.0950 11 QSLAARR|RS 0.102 . LmxM.05.0950 12 SLAARRR|SR 0.223 . LmxM.05.0950 14 AARRRSR|RL 0.208 . LmxM.05.0950 15 ARRRSRR|LF 0.554 *ProP* LmxM.05.0950 18 RSRRLFR|RD 0.320 . LmxM.05.0950 19 SRRLFRR|DE 0.228 . LmxM.05.0950 30 FWCSLLK|RC 0.057 . LmxM.05.0950 31 WCSLLKR|CL 0.151 . LmxM.05.0950 39 LPCLALR|WK 0.084 . LmxM.05.0950 41 CLALRWK|ST 0.084 . LmxM.05.0950 44 LRWKSTR|AT 0.161 . LmxM.05.0950 48 STRATSR|AR 0.091 . LmxM.05.0950 50 RATSRAR|AI 0.095 . LmxM.05.0950 77 LVYLSWK|SS 0.070 . LmxM.05.0950 97 PSTPSPR|MP 0.118 . LmxM.05.0950 119 VDVAVIR|QQ 0.092 . LmxM.05.0950 127 QEEAVVR|KW 0.082 . LmxM.05.0950 128 EEAVVRK|WR 0.087 . LmxM.05.0950 130 AVVRKWR|EN 0.252 . LmxM.05.0950 135 WRENDFR|PT 0.108 . LmxM.05.0950 142 PTYWEVK|RR 0.053 . LmxM.05.0950 143 TYWEVKR|RT 0.147 . LmxM.05.0950 144 YWEVKRR|TL 0.133 . LmxM.05.0950 148 KRRTLPR|LT 0.172 . LmxM.05.0950 151 TLPRLTK|KV 0.151 . LmxM.05.0950 152 LPRLTKK|VL 0.120 . LmxM.05.0950 162 SWFEHGR|RA 0.097 . LmxM.05.0950 163 WFEHGRR|AA 0.142 . LmxM.05.0950 213 QQSQYYR|AA 0.196 . LmxM.05.0950 221 AMDAILR|HG 0.075 . LmxM.05.0950 225 ILRHGPR|VG 0.121 . LmxM.05.0950 230 PRVGGTK|RD 0.056 . LmxM.05.0950 231 RVGGTKR|DA 0.203 . LmxM.05.0950 245 VDEGLGR|RR 0.084 . LmxM.05.0950 246 DEGLGRR|RY 0.118 . LmxM.05.0950 247 EGLGRRR|YD 0.098 . LmxM.05.0950 252 RRYDAAR|HA 0.121 . LmxM.05.0950 265 PPHLSPR|GR 0.129 . LmxM.05.0950 267 HLSPRGR|EL 0.153 . LmxM.05.0950 272 GRELLEK|VA 0.069 . LmxM.05.0950 294 QDEAAAR|QP 0.099 . LmxM.05.0950 299 ARQPGWR|WS 0.086 . LmxM.05.0950 314 TANIPLR|IE 0.123 . LmxM.05.0950 320 RIEGSSR|VE 0.086 . LmxM.05.0950 337 PGGSQFR|RK 0.086 . LmxM.05.0950 338 GGSQFRR|KQ 0.174 . LmxM.05.0950 339 GSQFRRK|QA 0.133 . LmxM.05.0950 352 AAATGAK|DA 0.096 . LmxM.05.0950 365 VGGVPNR|RR 0.092 . LmxM.05.0950 366 GGVPNRR|RT 0.118 . LmxM.05.0950 367 GVPNRRR|TR 0.099 . LmxM.05.0950 369 PNRRRTR|AE 0.367 . LmxM.05.0950 373 RTRAEDR|KE 0.071 . LmxM.05.0950 374 TRAEDRK|EV 0.157 . LmxM.05.0950 410 GVPFSPR|PA 0.089 . LmxM.05.0950 415 PRPALER|GV 0.123 . LmxM.05.0950 421 RGVPGTR|VV 0.068 . LmxM.05.0950 429 VLSPDAK|GA 0.080 . LmxM.05.0950 432 PDAKGAR|VP 0.070 . LmxM.05.0950 436 GARVPLK|PS 0.076 . LmxM.05.0950 453 ATQQPMK|HA 0.076 . LmxM.05.0950 464 AAHWDSK|YF 0.072 . LmxM.05.0950 486 PVVFLLR|TI 0.074 . LmxM.05.0950 489 FLLRTIK|NI 0.096 . LmxM.05.0950 502 DVAEALK|ES 0.062 . LmxM.05.0950 506 ALKESYK|AE 0.064 . LmxM.05.0950 509 ESYKAER|SG 0.104 . LmxM.05.0950 529 GLTSTFR|NA 0.095 . LmxM.05.0950 538 TTEAEVR|ER 0.080 . LmxM.05.0950 540 EAEVRER|LA 0.087 . LmxM.05.0950 560 YQYFFAR|PY 0.131 . LmxM.05.0950 577 LVAAGMR|NH 0.076 . LmxM.05.0950 582 MRNHPTK|VE 0.095 . LmxM.05.0950 588 KVEVDVR|TW 0.087 . LmxM.05.0950 612 DGEEAYK|HW 0.065 . LmxM.05.0950 624 DNTYGSR|HL 0.075 . LmxM.05.0950 629 SRHLAQR|WR 0.103 . LmxM.05.0950 631 HLAQRWR|ST 0.171 . LmxM.05.0950 638 STPSVMR|TR 0.091 . LmxM.05.0950 640 PSVMRTR|YS 0.111 . LmxM.05.0950 686 YAGLSQR|EW 0.090 . LmxM.05.0950 691 QREWELR|HR 0.092 . LmxM.05.0950 693 EWELRHR|AM 0.067 . LmxM.05.0950 696 LRHRAMK|YT 0.322 . LmxM.05.0950 708 SAELLWR|YH 0.083 . LmxM.05.0950 721 LPPAEAR|RK 0.077 . LmxM.05.0950 722 PPAEARR|KP 0.156 . LmxM.05.0950 723 PAEARRK|PD 0.066 . LmxM.05.0950 729 KPDPFLR|LL 0.130 . LmxM.05.0950 748 INAAYTR|RL 0.089 . LmxM.05.0950 749 NAAYTRR|LL 0.112 . LmxM.05.0950 757 LANNASR|PS 0.100 . LmxM.05.0950 765 SVASLPR|SW 0.144 . LmxM.05.0950 784 TLHSVPR|TT 0.160 . LmxM.05.0950 790 RTTYDVR|FV 0.108 . LmxM.05.0950 799 ENFDQLR|VY 0.077 . LmxM.05.0950 803 QLRVYDR|LD 0.089 . LmxM.05.0950 806 VYDRLDR|AI 0.145 . LmxM.05.0950 818 SSFDAER|YL 0.138 . LmxM.05.0950 838 SQQADLR|RN 0.107 . LmxM.05.0950 839 QQADLRR|NR 0.122 . LmxM.05.0950 841 ADLRRNR|DV 0.546 *ProP* LmxM.05.0950 851 VAEDDHK|HW 0.063 . LmxM.05.0950 858 HWLDTQR|VL 0.083 . LmxM.05.0950 869 IPIPFPK|SW 0.133 . LmxM.05.0950 906 LGDYWTR|KE 0.071 . LmxM.05.0950 907 GDYWTRK|E- 0.097 . ____________________________^_________________

  • Fasta :-

    >LmxM.05.0950 ATGCAACAACATCAATCCCTGGCGGCTCGGCGGCGGAGCCGCAGGCTGTTCCGCAGGGAC GAGGCTCCGTTTTGGTGCAGCCTGCTGAAGCGGTGCCTACCCTGTCTTGCCCTGCGATGG AAGAGCACTCGCGCGACGAGTCGCGCCCGGGCCATCCTCATGGGCATCCTGCTCTGTCTC ATCGCCACCCTCATCTCCCTCATTGGCCTTTTGGTGTACCTCTCCTGGAAGAGCAGCCCC AGCCACCCCCCACTCGAGGCTGTCGCCGCGCCGTCGACCCCCTCGCCTCGGATGCCGTCA GAGGCGGGTATGCACAACCCGTTGGCCGAAGACTCCGTCGACGTCGCCGTTATCCGGCAG CAGGAGGAGGCGGTGGTTCGGAAGTGGAGGGAGAACGACTTTCGTCCTACCTACTGGGAG GTCAAGCGCCGCACCCTACCGCGACTAACGAAGAAGGTCTTGGAGTCGTGGTTTGAGCAC GGAAGGCGTGCGGCGGCGTCCGCTACGGCGGTGGAGGTTCCAGAGGATGTGCTGACGGCG CATACCTGGGACGCTGTCGACGGCGGCGACGCAGACGCTGACCTCTTCGACACCCTCGCC TTTCTCTACCCACCAGCGCAGCAGAGCCAGTACTACCGCGCGGCGATGGACGCGATTTTG CGCCACGGCCCTCGCGTCGGAGGCACGAAGCGCGACGCCCTTCTCCATCACTTCGTCGAT GAAGGACTCGGACGTCGACGGTACGACGCCGCACGGCACGCCTACCACCCAGCACCGCCG CACCTCAGCCCGCGTGGGAGGGAACTGCTGGAGAAGGTAGCCACCTCGTGGCCAGATGCA CCCCACCTGGCCGCCGCGCCGCAGGACGAGGCTGCGGCCCGTCAGCCGGGCTGGCGGTGG TCTCTGAGCTGGGACAACTTCACGGCGAATATTCCATTACGCATCGAGGGCAGCTCGCGC GTCGAGATGCAGAACCTCGTCTTTCAGTTCCCCGGTGGGTCGCAGTTCCGTCGCAAGCAG GCCGCGGCCGCATCAGCGGCAGCAACCGGCGCGAAGGATGCACTCGACGAGTTCGTCGGC GGCGTGCCAAACCGCCGGCGCACCCGCGCTGAGGATCGCAAGGAGGTACTCGAAGCTGAA TACCACCCGGCCGACATGACAGGAGAGACCGTCTACACACAGGAGAACTTCCTGCAGTGG GCACAAGACGGGGTCCCGTTTAGCCCTCGCCCTGCGCTGGAGCGCGGGGTGCCGGGCACG CGGGTCGTCCTGTCCCCGGATGCGAAGGGGGCGCGGGTGCCGCTGAAGCCGAGTCTGTCC GCGCAGGCCGCCGAACCGGCGACGCAGCAGCCCATGAAGCACGCTGTGCTTGCTGCGCAC TGGGACTCGAAGTACTTCGCAGACCTCCCCTTCCTCGGCGCCTGCGACTCCGCCATGCCG GTGGTGTTCCTCCTGCGAACCATCAAGAACATCGCCGTTTTGACCGATGTGGCGGAGGCG TTGAAGGAGTCGTACAAGGCCGAGCGCTCCGGCGCAGTGGACGGCGACCCAGCCGCCGCG GTACCCGGGCTCACGAGCACGTTCCGCAACGCCACGACGGAGGCTGAAGTGAGAGAGCGG CTGGCGTCACTCCTCTCACCAGCCCATCACGCGCTCCTCTACCAGTACTTCTTCGCGCGC CCCTACAGCGTCGGCGATGAGCAACAGAACTTAGTTGCGGCGGGTATGCGAAATCATCCG ACAAAGGTGGAGGTTGACGTGCGCACATGGCTGGACTGGGTGCAGCACCTGCCCATCATC TCCGTCATCCTCTTCGATGGCGAGGAGGCGTACAAGCACTGGTCCGGGGACGACAACACG TATGGCTCGCGGCACCTAGCGCAGCGGTGGCGCAGCACCCCCTCCGTGATGCGGACGCGC TACTCTGGCGGTCCACAGTCCCTCTACGACTCGGTTGACCTCTTTGCCCTCTACGACCTT ATGGGCCCGGCAGGGACGACGTTCAGCAATATGTACCCGACGCAGAGCGGCATCTTCTAC GCGGGGCTATCGCAGCGCGAGTGGGAGCTCCGCCATCGAGCGATGAAATACACCTCGGCA ATCTCCGCGGAGCTCCTGTGGCGGTACCACGAGGCCACCGCATTGCCGCCGGCGGAAGCG CGCAGGAAGCCAGACCCCTTTCTCCGCCTCCTCGGCCCCTCACCACATGAAGCAGTCGCA TCCATCAACGCTGCCTACACGCGACGGCTGCTGGCAAACAACGCATCGCGCCCGTCAGTG GCGTCACTTCCGCGGTCGTGGCTGATGTACGGTTCGCCGCACGAGATGTTCACCCTGCAT AGCGTCCCCCGCACCACCTACGACGTCAGGTTCGTGGAAAACTTTGATCAGCTGCGGGTG TACGACAGGCTGGACCGGGCGATTGCCGCCGAGAGCAGCTTCGATGCGGAACGTTACCTG AGCACCATCAACCACAACATATTCTTCTCTCCGTCTCAGCAGGCGGACCTGCGCCGCAAC CGCGACGTCTTCGTCGCTGAGGATGACCACAAGCACTGGCTGGACACCCAACGGGTCCTG CATCTTATCCCCATCCCGTTCCCCAAGTCATGGCACACGGCGAGCGACGACGGCAGCAAC GTGCACGATGGAACGTCGACGGACCTGGCAGGGCTGTTATGGTCTACGGTATTAGAGCTG GGCGACTACTGGACGCGCAAAGAATGA
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  • Fasta :-

    MQQHQSLAARRRSRRLFRRDEAPFWCSLLKRCLPCLALRWKSTRATSRARAILMGILLCL IATLISLIGLLVYLSWKSSPSHPPLEAVAAPSTPSPRMPSEAGMHNPLAEDSVDVAVIRQ QEEAVVRKWRENDFRPTYWEVKRRTLPRLTKKVLESWFEHGRRAAASATAVEVPEDVLTA HTWDAVDGGDADADLFDTLAFLYPPAQQSQYYRAAMDAILRHGPRVGGTKRDALLHHFVD EGLGRRRYDAARHAYHPAPPHLSPRGRELLEKVATSWPDAPHLAAAPQDEAAARQPGWRW SLSWDNFTANIPLRIEGSSRVEMQNLVFQFPGGSQFRRKQAAAASAAATGAKDALDEFVG GVPNRRRTRAEDRKEVLEAEYHPADMTGETVYTQENFLQWAQDGVPFSPRPALERGVPGT RVVLSPDAKGARVPLKPSLSAQAAEPATQQPMKHAVLAAHWDSKYFADLPFLGACDSAMP VVFLLRTIKNIAVLTDVAEALKESYKAERSGAVDGDPAAAVPGLTSTFRNATTEAEVRER LASLLSPAHHALLYQYFFARPYSVGDEQQNLVAAGMRNHPTKVEVDVRTWLDWVQHLPII SVILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRTRYSGGPQSLYDSVDLFALYDL MGPAGTTFSNMYPTQSGIFYAGLSQREWELRHRAMKYTSAISAELLWRYHEATALPPAEA RRKPDPFLRLLGPSPHEAVASINAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMFTLH SVPRTTYDVRFVENFDQLRVYDRLDRAIAAESSFDAERYLSTINHNIFFSPSQQADLRRN RDVFVAEDDHKHWLDTQRVLHLIPIPFPKSWHTASDDGSNVHDGTSTDLAGLLWSTVLEL GDYWTRKE

  • title: metal binding site
  • coordinates: H460,D476,E608,E609,D659,H872
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.05.0950276 SKVATSWPDA0.997unspLmxM.05.0950276 SKVATSWPDA0.997unspLmxM.05.0950276 SKVATSWPDA0.997unspLmxM.05.0950563 SARPYSVGDE0.996unspLmxM.05.0950647 SGGPQSLYDS0.992unspLmxM.05.0950684 SYAGLSQREW0.993unspLmxM.05.0950734 SLLGPSPHEA0.996unspLmxM.05.095013 SARRRSRRLF0.996unspLmxM.05.095047 STRATSRARA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India