LmxM.05.0960 | metallo-peptidase, Clan M-, Family M49

  • Computed_GO_Component_IDs:  GO:0005737      

  • Computed_GO_Components:  cytoplasm      

  • Computed_GO_Function_IDs:  GO:0008239      

  • Computed_GO_Functions:  dipeptidyl-peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.05.0960OTHER0.9414500.0148070.043743
No Results

  • Fasta :-

    >LmxM.05.0960 MSHNALYVTPRAVPYCTLAIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPL LRLFFKVLSVQPLDAFKANSVDAGVDPDEVKQFLEYVAMVYSNMGNYISFGDTKFVPSIP KESFAKIVASAEGSPAVDAQLLDAIYSLDDDKLTLDFPPKGLTRYYSPNVTREDAAVAND FLASKKMDGVNTRVFKEEDGTLVIRVAAATEKTVPAEKFNGRAIAMYYGDYKEEMARVVA ELRKAQPYAENETEVRMLNHYVAHFQHGDVDAHKESQKEWVKDVGPTVETNIGFIESYRD PSGVRAEWEGFVAVVNKEQSKMYGALVAQGEKFIAQLPWGKPFEKDVFSSPDFTSLDVLG FASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKDKLNYITEADWELYKTSILAA TSVNVGIHELLGHGTGKLLSENSDGTFNFDKNTVDPISGKPVATWYKPGDTYSSVFGSLG NSYEECRAEAVSLYLCLVPDLLEIFNLKTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKH QWRQAHMRARFCILQALVRAPNPIVQITENAEEGVLITLDRERIATDGRQAIGDLLVNLN VNKATADAKRGGAYFENMTVVSDQYVHYRDIIMARRKPRKQYVQPHTFISGDTVEVREFA GSVEGVVESFVTRHREIPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/514 Sequence name : 514 Sequence length : 679 VALUES OF COMPUTED PARAMETERS Coef20 : 4.150 CoefTot : -1.668 ChDiff : -17 ZoneTo : 50 KR : 4 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.641 0.133 0.557 MesoH : -0.417 0.365 -0.361 0.246 MuHd_075 : 30.742 20.205 9.381 6.084 MuHd_095 : 37.614 25.982 11.442 7.194 MuHd_100 : 40.400 27.007 11.995 8.347 MuHd_105 : 31.000 22.216 9.756 6.893 Hmax_075 : 13.300 15.100 3.917 5.553 Hmax_095 : 16.275 21.400 5.082 5.495 Hmax_100 : 17.400 21.400 5.082 6.330 Hmax_105 : 14.700 19.133 5.023 3.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7362 0.2638 DFMC : 0.7469 0.2531
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 679 LmxM.05.0960 MSHNALYVTPRAVPYCTLAIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPLLRLFFKVLSVQPLDAFKANS 80 VDAGVDPDEVKQFLEYVAMVYSNMGNYISFGDTKFVPSIPKESFAKIVASAEGSPAVDAQLLDAIYSLDDDKLTLDFPPK 160 GLTRYYSPNVTREDAAVANDFLASKKMDGVNTRVFKEEDGTLVIRVAAATEKTVPAEKFNGRAIAMYYGDYKEEMARVVA 240 ELRKAQPYAENETEVRMLNHYVAHFQHGDVDAHKESQKEWVKDVGPTVETNIGFIESYRDPSGVRAEWEGFVAVVNKEQS 320 KMYGALVAQGEKFIAQLPWGKPFEKDVFSSPDFTSLDVLGFASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKD 400 KLNYITEADWELYKTSILAATSVNVGIHELLGHGTGKLLSENSDGTFNFDKNTVDPISGKPVATWYKPGDTYSSVFGSLG 480 NSYEECRAEAVSLYLCLVPDLLEIFNLKTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKHQWRQAHMRARFCILQALVRA 560 PNPIVQITENAEEGVLITLDRERIATDGRQAIGDLLVNLNVNKATADAKRGGAYFENMTVVSDQYVHYRDIIMARRKPRK 640 QYVQPHTFISGDTVEVREFAGSVEGVVESFVTRHREIPL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ....................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.05.0960 11 ALYVTPR|AV 0.123 . LmxM.05.0960 25 AIANAFK|DL 0.092 . LmxM.05.0960 30 FKDLTPK|QR 0.066 . LmxM.05.0960 32 DLTPKQR|HY 0.100 . LmxM.05.0960 62 ESLPLLR|LF 0.083 . LmxM.05.0960 66 LLRLFFK|VL 0.072 . LmxM.05.0960 77 QPLDAFK|AN 0.061 . LmxM.05.0960 91 VDPDEVK|QF 0.060 . LmxM.05.0960 114 ISFGDTK|FV 0.082 . LmxM.05.0960 121 FVPSIPK|ES 0.061 . LmxM.05.0960 126 PKESFAK|IV 0.092 . LmxM.05.0960 152 YSLDDDK|LT 0.057 . LmxM.05.0960 160 TLDFPPK|GL 0.068 . LmxM.05.0960 164 PPKGLTR|YY 0.114 . LmxM.05.0960 172 YSPNVTR|ED 0.094 . LmxM.05.0960 185 NDFLASK|KM 0.060 . LmxM.05.0960 186 DFLASKK|MD 0.103 . LmxM.05.0960 193 MDGVNTR|VF 0.095 . LmxM.05.0960 196 VNTRVFK|EE 0.130 . LmxM.05.0960 205 DGTLVIR|VA 0.093 . LmxM.05.0960 212 VAAATEK|TV 0.075 . LmxM.05.0960 218 KTVPAEK|FN 0.078 . LmxM.05.0960 222 AEKFNGR|AI 0.100 . LmxM.05.0960 232 MYYGDYK|EE 0.058 . LmxM.05.0960 237 YKEEMAR|VV 0.105 . LmxM.05.0960 243 RVVAELR|KA 0.084 . LmxM.05.0960 244 VVAELRK|AQ 0.079 . LmxM.05.0960 256 ENETEVR|ML 0.098 . LmxM.05.0960 274 GDVDAHK|ES 0.062 . LmxM.05.0960 278 AHKESQK|EW 0.062 . LmxM.05.0960 282 SQKEWVK|DV 0.105 . LmxM.05.0960 299 GFIESYR|DP 0.121 . LmxM.05.0960 305 RDPSGVR|AE 0.083 . LmxM.05.0960 317 FVAVVNK|EQ 0.074 . LmxM.05.0960 321 VNKEQSK|MY 0.082 . LmxM.05.0960 332 LVAQGEK|FI 0.064 . LmxM.05.0960 341 AQLPWGK|PF 0.064 . LmxM.05.0960 345 WGKPFEK|DV 0.093 . LmxM.05.0960 379 PNYDDIR|QT 0.077 . LmxM.05.0960 385 RQTVGFK|NV 0.066 . LmxM.05.0960 399 VSAMTFK|DK 0.070 . LmxM.05.0960 401 AMTFKDK|LN 0.067 . LmxM.05.0960 414 ADWELYK|TS 0.058 . LmxM.05.0960 437 LGHGTGK|LL 0.073 . LmxM.05.0960 451 GTFNFDK|NT 0.065 . LmxM.05.0960 460 VDPISGK|PV 0.071 . LmxM.05.0960 467 PVATWYK|PG 0.063 . LmxM.05.0960 487 NSYEECR|AE 0.081 . LmxM.05.0960 508 LEIFNLK|TA 0.066 . LmxM.05.0960 511 FNLKTAK|EQ 0.067 . LmxM.05.0960 526 CWLNMVR|AG 0.070 . LmxM.05.0960 539 EFYTPEK|HQ 0.061 . LmxM.05.0960 543 PEKHQWR|QA 0.108 . LmxM.05.0960 548 WRQAHMR|AR 0.152 . LmxM.05.0960 550 QAHMRAR|FC 0.122 . LmxM.05.0960 559 ILQALVR|AP 0.085 . LmxM.05.0960 581 VLITLDR|ER 0.073 . LmxM.05.0960 583 ITLDRER|IA 0.114 . LmxM.05.0960 589 RIATDGR|QA 0.098 . LmxM.05.0960 603 VNLNVNK|AT 0.069 . LmxM.05.0960 609 KATADAK|RG 0.073 . LmxM.05.0960 610 ATADAKR|GG 0.191 . LmxM.05.0960 629 DQYVHYR|DI 0.148 . LmxM.05.0960 635 RDIIMAR|RK 0.086 . LmxM.05.0960 636 DIIMARR|KP 0.118 . LmxM.05.0960 637 IIMARRK|PR 0.078 . LmxM.05.0960 639 MARRKPR|KQ 0.432 . LmxM.05.0960 640 ARRKPRK|QY 0.107 . LmxM.05.0960 657 GDTVEVR|EF 0.090 . LmxM.05.0960 673 VESFVTR|HR 0.102 . LmxM.05.0960 675 SFVTRHR|EI 0.077 . ____________________________^_________________

  • Fasta :-

    >LmxM.05.0960 ATGTCGCACAACGCCCTTTATGTTACCCCTCGTGCGGTACCGTACTGCACCCTGGCCATC GCCAACGCCTTCAAGGACCTGACCCCGAAGCAGCGCCACTACGCCCATCACATGATGGCG GCGGGGTGGTGCGGCGCCCCGGTGGTGGCCGAGCAGCTGAGTCCCGAGTCTCTGCCGCTC CTGCGTCTCTTCTTCAAGGTACTCAGTGTCCAGCCGCTGGACGCCTTCAAGGCGAACAGC GTCGACGCCGGCGTCGACCCCGATGAGGTGAAGCAGTTCCTGGAATACGTCGCGATGGTC TACTCGAACATGGGCAACTACATTTCCTTTGGCGACACGAAGTTCGTTCCATCGATTCCG AAGGAGAGCTTTGCGAAGATCGTGGCGAGCGCGGAGGGGTCTCCGGCGGTGGATGCGCAG CTGCTGGACGCCATCTACAGCCTGGACGACGACAAGCTGACGCTGGACTTCCCTCCCAAG GGACTTACGCGGTACTACAGCCCAAACGTCACCCGCGAAGACGCCGCTGTCGCGAACGAC TTCCTGGCGTCGAAAAAGATGGACGGCGTCAACACACGCGTGTTCAAGGAGGAAGACGGC ACCCTCGTCATCCGCGTCGCGGCGGCGACTGAGAAGACGGTGCCGGCGGAGAAGTTCAAC GGCCGCGCCATTGCAATGTACTATGGCGACTACAAGGAGGAGATGGCCCGCGTCGTGGCG GAGCTGCGCAAGGCGCAGCCGTACGCGGAGAACGAAACGGAGGTCCGTATGTTGAACCAC TACGTCGCGCACTTCCAGCATGGCGACGTGGACGCGCACAAGGAGAGTCAGAAGGAGTGG GTGAAGGATGTGGGGCCGACGGTGGAGACGAACATCGGCTTCATCGAGTCGTACCGCGAC CCCTCCGGCGTGCGTGCGGAGTGGGAGGGCTTCGTGGCGGTGGTGAACAAGGAGCAGTCG AAGATGTACGGCGCACTGGTGGCACAGGGCGAGAAGTTCATTGCTCAGTTGCCGTGGGGC AAGCCGTTCGAGAAGGACGTCTTCTCCAGCCCCGACTTCACCAGCCTTGACGTCCTGGGC TTCGCGAGCAGTGGCATTCCGGCCGGCATCAACATCCCCAACTACGACGACATTCGTCAG ACCGTCGGCTTCAAGAACGTGTACCTGTCCAACGTGGTGAGCGCGATGACCTTCAAGGAC AAGCTGAACTACATCACAGAGGCGGACTGGGAGCTGTACAAGACGAGCATTCTTGCCGCG ACCTCGGTGAACGTCGGCATCCACGAGCTGCTGGGCCACGGCACAGGCAAGCTGCTGTCG GAGAACAGCGACGGCACCTTCAACTTTGACAAGAACACGGTGGACCCCATCAGCGGCAAG CCCGTCGCCACGTGGTACAAGCCCGGCGACACGTATTCGAGCGTGTTTGGCAGTCTTGGA AACTCGTACGAGGAGTGCCGCGCTGAGGCGGTGTCCCTGTACCTCTGCTTGGTGCCGGAC CTGCTGGAGATCTTCAACCTCAAGACAGCGAAGGAGCAGCAGGATGTCATCTATGTCTGC TGGCTGAACATGGTGCGCGCCGGCCTGGTCGGGCTCGAGTTCTACACCCCGGAGAAGCAC CAGTGGCGTCAGGCGCACATGCGGGCCCGATTCTGTATCCTCCAGGCGCTGGTCCGTGCA CCGAACCCCATTGTGCAGATCACCGAGAACGCCGAGGAGGGCGTCCTCATCACACTTGAC CGCGAGCGCATCGCCACGGACGGGCGCCAGGCGATCGGGGACCTGCTCGTGAACCTCAAT GTGAACAAGGCGACCGCCGACGCGAAGCGCGGCGGGGCCTACTTCGAGAACATGACGGTC GTGAGCGACCAGTACGTCCACTACCGCGACATCATCATGGCGCGCCGCAAGCCGCGCAAG CAGTACGTCCAGCCACACACCTTCATCAGCGGGGATACGGTGGAGGTGCGGGAGTTTGCC GGGTCGGTAGAGGGGGTCGTGGAATCCTTTGTTACCCGACACCGCGAGATCCCGCTGTAG
  • Download Fasta

  • Fasta :-

    MSHNALYVTPRAVPYCTLAIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPL LRLFFKVLSVQPLDAFKANSVDAGVDPDEVKQFLEYVAMVYSNMGNYISFGDTKFVPSIP KESFAKIVASAEGSPAVDAQLLDAIYSLDDDKLTLDFPPKGLTRYYSPNVTREDAAVAND FLASKKMDGVNTRVFKEEDGTLVIRVAAATEKTVPAEKFNGRAIAMYYGDYKEEMARVVA ELRKAQPYAENETEVRMLNHYVAHFQHGDVDAHKESQKEWVKDVGPTVETNIGFIESYRD PSGVRAEWEGFVAVVNKEQSKMYGALVAQGEKFIAQLPWGKPFEKDVFSSPDFTSLDVLG FASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKDKLNYITEADWELYKTSILAA TSVNVGIHELLGHGTGKLLSENSDGTFNFDKNTVDPISGKPVATWYKPGDTYSSVFGSLG NSYEECRAEAVSLYLCLVPDLLEIFNLKTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKH QWRQAHMRARFCILQALVRAPNPIVQITENAEEGVLITLDRERIATDGRQAIGDLLVNLN VNKATADAKRGGAYFENMTVVSDQYVHYRDIIMARRKPRKQYVQPHTFISGDTVEVREFA GSVEGVVESFVTRHREIPL

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.05.0960302 SYRDPSGVRA0.996unspLmxM.05.0960302 SYRDPSGVRA0.996unspLmxM.05.0960302 SYRDPSGVRA0.996unspLmxM.05.0960482 SSLGNSYEEC0.994unspLmxM.05.0960276 SAHKESQKEW0.997unspLmxM.05.0960297 SGFIESYRDP0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India