LmxM.06.0340 | serine peptidase, clan SC, family S9A-like protein

_IDPredictionOTHERSPmTPCS_Position
LmxM.06.0340OTHER0.5710960.0019060.426998
No Results

  • Fasta :-

    >LmxM.06.0340 MAGLFPWVPTSNLGYSLSRRLVNKWCPQLRSSYPLPMLDGPLPTEKPEGLEIHGETQKPD PFRYMEDLFDRNTQDYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSNREGGYDKG EERIGDYVYFTRVVPGNDSNAIGFYRKRFGEVDLLAEELINPLSLQQHFGYKDCSIGVCR VSEDARYLAYTLSVEGGDRYLCHIRSVDNASLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNGNALVVPA SFPLIPTPLKSFFKEGKPVEIAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHVAFERIQHIRVIKCDGGLDTAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFIYSSLIQPPRDCVFNFDSDITSSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKPCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRAPFLDII NTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNVNDRVTYPGMMISVCLDDDRV PPWNALKYVAKLRQQRTRKDVDPVARPLVLRMRASGGHYFWGETENICEELAFLCSQLDL EGPGKTLNDMDVMTHMHNLTATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RKVKAQKEPFFWVPTDSELDQKKVDELFRAKERDARESVRSGAKPGSFGKATGRNLYQEE QRGKP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/876 Sequence name : 876 Sequence length : 905 VALUES OF COMPUTED PARAMETERS Coef20 : 4.162 CoefTot : -0.655 ChDiff : -17 ZoneTo : 38 KR : 4 DE : 0 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.806 1.794 0.388 0.639 MesoH : -0.037 0.683 -0.172 0.312 MuHd_075 : 38.172 25.103 11.475 8.730 MuHd_095 : 41.948 27.732 11.922 9.962 MuHd_100 : 37.707 20.790 8.539 9.319 MuHd_105 : 37.614 21.018 8.916 8.396 Hmax_075 : 11.200 19.017 3.737 3.560 Hmax_095 : 15.138 15.137 3.117 5.784 Hmax_100 : 10.600 8.000 1.651 4.670 Hmax_105 : -1.800 10.400 2.560 4.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0579 0.9421 DFMC : 0.0696 0.9304 This protein is probably imported in mitochondria. f(Ser) = 0.1316 f(Arg) = 0.0789 CMi = 0.72886 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 905 LmxM.06.0340 MAGLFPWVPTSNLGYSLSRRLVNKWCPQLRSSYPLPMLDGPLPTEKPEGLEIHGETQKPDPFRYMEDLFDRNTQDYTKKE 80 MQHFSLISSKFDFRHSKGRLWAELDAKVVVSNREGGYDKGEERIGDYVYFTRVVPGNDSNAIGFYRKRFGEVDLLAEELI 160 NPLSLQQHFGYKDCSIGVCRVSEDARYLAYTLSVEGGDRYLCHIRSVDNASLFHVIRGTNIVSIEFGSGNQFFYTESNEL 240 NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNGNALVVPASFPLIPTPLKSFFKEGKPVE 320 IAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALAYGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHVAFER 400 IQHIRVIKCDGGLDTAAQTPRSEDVVLHFPPLSTVTPGLNKNFRQKAMSFIYSSLIQPPRDCVFNFDSDITSSQARLCAS 480 EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNTPKPCLIYVYGSYGEVPSMHF 560 QLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIKSIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMN 640 MRGCGLFGNVLMRAPFLDIINTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNVNDRVTYPGMMISVCLDDDRV 720 PPWNALKYVAKLRQQRTRKDVDPVARPLVLRMRASGGHYFWGETENICEELAFLCSQLDLEGPGKTLNDMDVMTHMHNLT 800 ATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNFRKVKAQKEPFFWVPTDSELDQKKVDELFRAKERDARESVR 880 SGAKPGSFGKATGRNLYQEEQRGKP 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..................P............................................................. 800 ................................................................................ 880 ......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.06.0340 19 LGYSLSR|RL 0.069 . LmxM.06.0340 20 GYSLSRR|LV 0.273 . LmxM.06.0340 24 SRRLVNK|WC 0.083 . LmxM.06.0340 30 KWCPQLR|SS 0.127 . LmxM.06.0340 46 GPLPTEK|PE 0.071 . LmxM.06.0340 58 IHGETQK|PD 0.054 . LmxM.06.0340 63 QKPDPFR|YM 0.131 . LmxM.06.0340 71 MEDLFDR|NT 0.088 . LmxM.06.0340 78 NTQDYTK|KE 0.059 . LmxM.06.0340 79 TQDYTKK|EM 0.081 . LmxM.06.0340 90 FSLISSK|FD 0.066 . LmxM.06.0340 94 SSKFDFR|HS 0.094 . LmxM.06.0340 97 FDFRHSK|GR 0.138 . LmxM.06.0340 99 FRHSKGR|LW 0.106 . LmxM.06.0340 107 WAELDAK|VV 0.067 . LmxM.06.0340 113 KVVVSNR|EG 0.083 . LmxM.06.0340 119 REGGYDK|GE 0.075 . LmxM.06.0340 123 YDKGEER|IG 0.083 . LmxM.06.0340 132 DYVYFTR|VV 0.090 . LmxM.06.0340 146 NAIGFYR|KR 0.088 . LmxM.06.0340 147 AIGFYRK|RF 0.086 . LmxM.06.0340 148 IGFYRKR|FG 0.173 . LmxM.06.0340 172 QQHFGYK|DC 0.085 . LmxM.06.0340 180 CSIGVCR|VS 0.102 . LmxM.06.0340 186 RVSEDAR|YL 0.122 . LmxM.06.0340 199 SVEGGDR|YL 0.089 . LmxM.06.0340 205 RYLCHIR|SV 0.159 . LmxM.06.0340 217 SLFHVIR|GT 0.106 . LmxM.06.0340 242 ESNELNR|PH 0.085 . LmxM.06.0340 245 ELNRPHR|VM 0.317 . LmxM.06.0340 252 VMMQEIR|PG 0.079 . LmxM.06.0340 264 PPVEIYR|DD 0.115 . LmxM.06.0340 275 QFFVDVR|KT 0.072 . LmxM.06.0340 276 FFVDVRK|TK 0.088 . LmxM.06.0340 278 VDVRKTK|DN 0.180 . LmxM.06.0340 281 RKTKDNK|YV 0.076 . LmxM.06.0340 290 TITSDSK|VN 0.063 . LmxM.06.0340 310 LIPTPLK|SF 0.075 . LmxM.06.0340 314 PLKSFFK|EG 0.070 . LmxM.06.0340 317 SFFKEGK|PV 0.108 . LmxM.06.0340 324 PVEIAGK|SG 0.077 . LmxM.06.0340 344 VMVTSDK|GP 0.059 . LmxM.06.0340 349 DKGPNYR|VV 0.099 . LmxM.06.0340 354 YRVVYIR|DE 0.102 . LmxM.06.0340 363 VALAYGK|EA 0.065 . LmxM.06.0340 368 GKEAEWK|EL 0.073 . LmxM.06.0340 374 KELVPHR|DN 0.116 . LmxM.06.0340 388 VDLFHGR|II 0.083 . LmxM.06.0340 400 SHVAFER|IQ 0.080 . LmxM.06.0340 405 ERIQHIR|VI 0.100 . LmxM.06.0340 408 QHIRVIK|CD 0.150 . LmxM.06.0340 421 TAAQTPR|SE 0.208 . LmxM.06.0340 441 VTPGLNK|NF 0.058 . LmxM.06.0340 444 GLNKNFR|QK 0.110 . LmxM.06.0340 446 NKNFRQK|AM 0.080 . LmxM.06.0340 460 SLIQPPR|DC 0.103 . LmxM.06.0340 476 ITSSQAR|LC 0.091 . LmxM.06.0340 487 EALFTQR|QS 0.096 . LmxM.06.0340 505 WPYSIYR|DV 0.226 . LmxM.06.0340 523 PITICQR|RD 0.071 . LmxM.06.0340 524 ITICQRR|DA 0.398 . LmxM.06.0340 542 AQPNTPK|PC 0.059 . LmxM.06.0340 570 PYMWMLR|RR 0.071 . LmxM.06.0340 571 YMWMLRR|RW 0.139 . LmxM.06.0340 572 MWMLRRR|WT 0.171 . LmxM.06.0340 581 VAFAHVR|GG 0.103 . LmxM.06.0340 594 NWAQLGK|GE 0.067 . LmxM.06.0340 598 LGKGENK|IK 0.066 . LmxM.06.0340 600 KGENKIK|SI 0.103 . LmxM.06.0340 619 VDMGYTK|PE 0.058 . LmxM.06.0340 642 AAAMNMR|GC 0.115 . LmxM.06.0340 653 FGNVLMR|AP 0.082 . LmxM.06.0340 675 PLSLAER|ED 0.076 . LmxM.06.0340 685 GDPLNNK|RD 0.057 . LmxM.06.0340 686 DPLNNKR|DL 0.166 . LmxM.06.0340 692 RDLDLLK|QY 0.065 . LmxM.06.0340 703 YYNVNDR|VT 0.104 . LmxM.06.0340 719 VCLDDDR|VP 0.060 . LmxM.06.0340 727 PPWNALK|YV 0.083 . LmxM.06.0340 731 ALKYVAK|LR 0.065 . LmxM.06.0340 733 KYVAKLR|QQ 0.083 . LmxM.06.0340 736 AKLRQQR|TR 0.203 . LmxM.06.0340 738 LRQQRTR|KD 0.101 . LmxM.06.0340 739 RQQRTRK|DV 0.629 *ProP* LmxM.06.0340 746 DVDPVAR|PL 0.079 . LmxM.06.0340 751 ARPLVLR|MR 0.103 . LmxM.06.0340 753 PLVLRMR|AS 0.110 . LmxM.06.0340 785 DLEGPGK|TL 0.067 . LmxM.06.0340 812 DHDDQQK|VF 0.058 . LmxM.06.0340 816 QQKVFLK|WD 0.066 . LmxM.06.0340 822 KWDNWER|ER 0.073 . LmxM.06.0340 824 DNWERER|ID 0.076 . LmxM.06.0340 830 RIDYHVK|LN 0.059 . LmxM.06.0340 841 NWEPNFR|KV 0.114 . LmxM.06.0340 842 WEPNFRK|VK 0.088 . LmxM.06.0340 844 PNFRKVK|AQ 0.141 . LmxM.06.0340 847 RKVKAQK|EP 0.067 . LmxM.06.0340 862 DSELDQK|KV 0.074 . LmxM.06.0340 863 SELDQKK|VD 0.081 . LmxM.06.0340 869 KVDELFR|AK 0.080 . LmxM.06.0340 871 DELFRAK|ER 0.060 . LmxM.06.0340 873 LFRAKER|DA 0.163 . LmxM.06.0340 876 AKERDAR|ES 0.234 . LmxM.06.0340 880 DARESVR|SG 0.114 . LmxM.06.0340 884 SVRSGAK|PG 0.066 . LmxM.06.0340 890 KPGSFGK|AT 0.095 . LmxM.06.0340 894 FGKATGR|NL 0.100 . LmxM.06.0340 902 LYQEEQR|GK 0.085 . LmxM.06.0340 904 QEEQRGK|P- 0.065 . ____________________________^_________________

  • Fasta :-

    >LmxM.06.0340 ATGGCTGGACTTTTTCCGTGGGTGCCGACGTCGAATCTAGGTTACTCTTTATCGCGTAGG TTGGTGAACAAATGGTGCCCGCAACTCCGCAGTTCGTATCCGCTTCCTATGCTGGACGGA CCGCTCCCCACCGAGAAGCCTGAGGGTCTTGAGATACATGGCGAGACCCAGAAACCGGAC CCGTTCCGCTACATGGAAGACTTGTTCGACCGGAACACTCAAGACTATACAAAAAAGGAG ATGCAGCACTTCTCCCTGATTAGCAGCAAGTTTGACTTTCGACATTCGAAGGGTCGTTTG TGGGCGGAGCTTGATGCCAAGGTGGTGGTGAGCAACCGTGAGGGCGGGTACGACAAGGGC GAGGAACGCATCGGTGACTACGTGTACTTTACCCGTGTCGTACCCGGGAACGACTCGAAT GCGATAGGGTTTTACCGGAAGCGATTTGGGGAAGTGGATCTCCTGGCAGAGGAACTCATC AACCCTCTCTCCCTCCAGCAGCACTTCGGCTACAAGGACTGTTCCATTGGTGTCTGCCGC GTCTCAGAAGACGCCCGCTACCTCGCATACACCCTTTCGGTGGAGGGTGGCGACAGGTAC TTGTGCCACATTCGCAGTGTTGACAACGCCAGTCTGTTTCACGTGATTCGCGGGACGAAC ATCGTGAGCATCGAGTTTGGCTCCGGCAACCAGTTTTTCTACACCGAGTCGAACGAGTTG AACCGGCCTCACCGCGTCATGATGCAGGAAATACGACCCGGGATATTAGAGCCACCGGTG GAGATTTACCGTGACGACGACGAGCAGTTTTTCGTCGATGTGCGAAAGACGAAGGATAAC AAGTACGTCACGATAACCTCGGACTCGAAGGTGAACGGCAACGCGCTAGTCGTGCCCGCG TCCTTTCCTCTTATTCCGACCCCTCTCAAGTCCTTCTTCAAGGAGGGCAAGCCGGTCGAG ATTGCAGGGAAGTCAGGGTGGAACTGGCTGGATCACTACAACGGCAACTTTGTCATGGTG ACATCCGACAAGGGACCGAACTACCGTGTGGTGTACATTCGCGACGAGGTGGCGCTGGCG TATGGGAAGGAGGCGGAGTGGAAAGAGCTTGTGCCGCACCGCGACAACGTGCAAATCGAT GACGTTGACCTCTTCCACGGTCGCATAATCCTTCACGAGTCGCACGTCGCCTTCGAGCGC ATTCAGCACATCCGCGTCATCAAGTGCGACGGCGGCCTCGACACCGCTGCGCAGACGCCA CGGAGCGAGGACGTGGTGCTGCACTTTCCCCCGCTGAGCACAGTGACTCCAGGCCTGAAC AAGAACTTTAGACAGAAGGCAATGAGCTTCATCTACAGCAGCCTGATTCAGCCGCCGCGC GACTGCGTCTTCAACTTCGACTCGGACATCACATCTAGCCAGGCGAGGCTGTGCGCGTCT GAGGCGCTGTTCACACAACGCCAGTCAGAGCACTTCACGCCGTGGGATTACATGTGGCCC TACAGCATCTACCGCGATGTCTGCGTCTCGGAAGACGGGACGGAGATCCCAATCACGATA TGCCAGCGCCGTGACGCATTCATTCAGGAAGCGACGGACTTTGAGGCGCAGCCCAACACG CCCAAGCCCTGCCTCATCTACGTGTACGGCTCCTACGGCGAAGTTCCGTCGATGCACTTC CAACTGGCCCCGTACATGTGGATGCTGCGGCGACGTTGGACCGTTGCCTTCGCGCACGTC CGCGGCGGCGGCGAGTTGCCCAACTGGGCACAGCTGGGGAAGGGAGAGAACAAAATCAAA TCTATCCAGGACTTCATCGCGTGCTGCGAGCACATGGTGGACATGGGTTACACAAAGCCG GAGCTGATGGTGGCTGCGGGGGCCAGCGCCGGCTGTGTACCGATTGCGGCAGCGATGAAC ATGCGCGGGTGTGGGCTGTTCGGCAATGTACTGATGCGGGCGCCGTTCCTGGACATCATT AACACCATGATAGATCCCGACCTCCCGCTTTCACTCGCCGAGCGCGAGGACTGGGGTGAC CCGCTCAACAACAAGAGAGACCTGGACCTGCTGAAGCAGTACGACCCATACTACAACGTG AACGACCGTGTGACGTACCCTGGAATGATGATATCAGTGTGCCTCGATGACGACCGTGTT CCGCCTTGGAACGCGCTCAAGTACGTGGCAAAGCTGCGGCAGCAGCGCACCCGCAAGGAC GTGGACCCGGTCGCTCGCCCGCTGGTGCTGCGCATGCGGGCAAGCGGCGGCCACTACTTC TGGGGCGAGACAGAGAACATCTGCGAGGAGCTTGCGTTTCTGTGTTCACAGTTGGACCTC GAGGGTCCTGGCAAGACGCTTAACGACATGGATGTCATGACCCACATGCACAACCTTACC GCCACCGGTGCCATGGATCACGACGACCAGCAAAAGGTGTTCCTGAAATGGGATAACTGG GAGAGGGAGCGTATCGACTACCATGTGAAGCTGAACTCCTTCAATTGGGAGCCGAACTTC CGCAAGGTGAAGGCTCAGAAGGAGCCGTTCTTCTGGGTGCCGACGGACTCGGAGCTTGAC CAGAAGAAAGTGGACGAACTTTTTCGCGCAAAGGAACGCGACGCCCGAGAGAGCGTTCGC TCTGGGGCGAAGCCAGGGAGCTTTGGCAAGGCAACCGGTCGCAACCTCTATCAAGAGGAG CAGCGCGGGAAGCCGTAG
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  • Fasta :-

    MAGLFPWVPTSNLGYSLSRRLVNKWCPQLRSSYPLPMLDGPLPTEKPEGLEIHGETQKPD PFRYMEDLFDRNTQDYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSNREGGYDKG EERIGDYVYFTRVVPGNDSNAIGFYRKRFGEVDLLAEELINPLSLQQHFGYKDCSIGVCR VSEDARYLAYTLSVEGGDRYLCHIRSVDNASLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNGNALVVPA SFPLIPTPLKSFFKEGKPVEIAGKSGWNWLDHYNGNFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHVAFERIQHIRVIKCDGGLDTAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFIYSSLIQPPRDCVFNFDSDITSSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKPCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRAPFLDII NTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNVNDRVTYPGMMISVCLDDDRV PPWNALKYVAKLRQQRTRKDVDPVARPLVLRMRASGGHYFWGETENICEELAFLCSQLDL EGPGKTLNDMDVMTHMHNLTATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RKVKAQKEPFFWVPTDSELDQKKVDELFRAKERDARESVRSGAKPGSFGKATGRNLYQEE QRGKP

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.06.0340419 TTAAQTPRSE0.992unspLmxM.06.0340878 SDARESVRSG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India