LmxM.07.0030 | hypothetical protein, conserved

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  • Fasta :-

    >LmxM.07.0030 MSINVIHGGIAIKTIPVHCIFNEFCNPPHMEHVDGQKCAPGYVPNDPLPEIKEHSDADIV IKNLLSVRSLHDAEKNAFTALVRVMIGDRDTQTLGDNTEADQYALIGVPVIVYGPGSIRV ANQENEFVPKKHVDDCGKKRAIHPTRKNHDM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/470 Sequence name : 470 Sequence length : 151 VALUES OF COMPUTED PARAMETERS Coef20 : 3.749 CoefTot : -1.359 ChDiff : -4 ZoneTo : 22 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.465 0.177 0.611 MesoH : -1.202 0.075 -0.532 0.140 MuHd_075 : 27.205 27.194 10.762 7.558 MuHd_095 : 8.177 11.379 5.474 2.859 MuHd_100 : 6.263 11.760 5.488 2.481 MuHd_105 : 10.383 13.077 6.426 2.954 Hmax_075 : 17.588 22.050 5.304 7.610 Hmax_095 : 14.700 18.200 5.149 6.190 Hmax_100 : 12.600 16.200 4.338 5.480 Hmax_105 : 13.400 17.383 5.587 6.008 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8654 0.1346 DFMC : 0.9249 0.0751
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 151 LmxM.07.0030 MSINVIHGGIAIKTIPVHCIFNEFCNPPHMEHVDGQKCAPGYVPNDPLPEIKEHSDADIVIKNLLSVRSLHDAEKNAFTA 80 LVRVMIGDRDTQTLGDNTEADQYALIGVPVIVYGPGSIRVANQENEFVPKKHVDDCGKKRAIHPTRKNHDM 160 ................................................................................ 80 ....................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.07.0030 13 HGGIAIK|TI 0.058 . LmxM.07.0030 37 EHVDGQK|CA 0.063 . LmxM.07.0030 52 DPLPEIK|EH 0.066 . LmxM.07.0030 62 DADIVIK|NL 0.062 . LmxM.07.0030 68 KNLLSVR|SL 0.177 . LmxM.07.0030 75 SLHDAEK|NA 0.080 . LmxM.07.0030 83 AFTALVR|VM 0.071 . LmxM.07.0030 89 RVMIGDR|DT 0.102 . LmxM.07.0030 119 YGPGSIR|VA 0.087 . LmxM.07.0030 130 ENEFVPK|KH 0.059 . LmxM.07.0030 131 NEFVPKK|HV 0.181 . LmxM.07.0030 138 HVDDCGK|KR 0.056 . LmxM.07.0030 139 VDDCGKK|RA 0.073 . LmxM.07.0030 140 DDCGKKR|AI 0.280 . LmxM.07.0030 146 RAIHPTR|KN 0.117 . LmxM.07.0030 147 AIHPTRK|NH 0.087 . ____________________________^_________________

  • Fasta :-

    >LmxM.07.0030 ATGTCGATCAATGTGATTCACGGCGGTATCGCGATAAAGACGATTCCTGTCCATTGCATT TTCAACGAGTTCTGCAACCCACCTCACATGGAACATGTAGATGGCCAAAAATGCGCTCCT GGCTACGTCCCGAACGATCCGCTTCCGGAGATAAAGGAACACAGTGATGCTGACATAGTC ATCAAAAACCTTCTCTCCGTCCGCTCGCTCCACGACGCCGAGAAGAATGCCTTCACTGCA CTGGTTCGTGTTATGATTGGTGACCGGGACACGCAGACGCTTGGTGACAACACGGAGGCT GACCAGTATGCTCTTATCGGCGTTCCTGTTATCGTCTACGGCCCTGGAAGCATCAGAGTT GCGAACCAGGAGAATGAGTTTGTCCCGAAGAAGCATGTGGATGACTGTGGGAAGAAGCGG GCCATTCACCCTACGCGCAAGAACCATGATATGTAG
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  • Fasta :-

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IDSitePeptideScoreMethod
LmxM.07.003055 SIKEHSDADI0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India