LmxM.08_29.1270 | serine peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.08_29.1270OTHER0.9997070.0001750.000118
No Results

  • Fasta :-

    >LmxM.08_29.1270 MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASV KDGLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKE VGRILDAAGAGKKAIRTTLLEMRKGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD MGALIAGAKYRGEFEERLKAVLNEVKESNNTIILFIDEIHLVLGAGKSDGAMDAANLLKP LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECMSILRGLKDRYEQHH GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ LEIEEKALQRDKDPSVKERLKAVKAEIQKAEEKLGPLLAKYEQERGRIDELQATQAKLDE KKVKLERAERMRDMETAADLKYNVIPIIQDRIRSLKEEIEKQKTTMLQGTVTETDIATVV SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVNRVAEAILRSRAGLSRSDRPTGS FLFLGPTGVGKTELSKAVATELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG QLTEPVRRRAYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL GAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGSKEMMGIIDLIV EELNGRLKDQSIRVSLTEEAKHYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS PNSTVKVTLSSNHKKLSFSVKRTAG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/690 Sequence name : 690 Sequence length : 865 VALUES OF COMPUTED PARAMETERS Coef20 : 4.154 CoefTot : -0.563 ChDiff : -2 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.400 0.063 0.583 MesoH : -0.986 0.309 -0.440 0.177 MuHd_075 : 25.353 16.075 5.979 5.788 MuHd_095 : 33.410 14.180 5.903 5.562 MuHd_100 : 34.867 13.515 6.982 5.045 MuHd_105 : 30.372 10.924 7.170 3.703 Hmax_075 : 3.850 2.975 -1.665 2.161 Hmax_095 : 10.600 6.800 -1.131 3.580 Hmax_100 : 10.200 4.300 -1.560 2.910 Hmax_105 : 9.100 3.033 -0.389 2.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5258 0.4742 DFMC : 0.6945 0.3055
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 865 LmxM.08_29.1270 MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASVKDGLEARVDAIPTQMPAPTQ 80 PRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKEVGRILDAAGAGKKAIRTTLLEMRKGKKITSDFQDDNYESL 160 NKYAVDLCKQAEDGKLDPVIGRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240 MGALIAGAKYRGEFEERLKAVLNEVKESNNTIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGATTLEEYRQ 320 YVEKDAAFERRFMPVQVNEPSVEECMSILRGLKDRYEQHHGVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANV 400 RVTLSSRPAEIDALERKKRQLEIEEKALQRDKDPSVKERLKAVKAEIQKAEEKLGPLLAKYEQERGRIDELQATQAKLDE 480 KKVKLERAERMRDMETAADLKYNVIPIIQDRIRSLKEEIEKQKTTMLQGTVTETDIATVVSRWTNIPVTKLSQTERERLL 560 HLADQLHLRVKGQDEAVNRVAEAILRSRAGLSRSDRPTGSFLFLGPTGVGKTELSKAVATELFDDAKYMVRLDMSEYMEQ 640 HSVARLIGAPPGYVGHEEGGQLTEPVRRRAYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL 720 GAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGSKEMMGIIDLIVEELNGRLKDQSIRVSLTEEA 800 KHYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNSTVKVTLSSNHKKLSFSVKRTAG 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................P............................................................. 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.08_29.1270 18 ASDLMAR|TA 0.085 . LmxM.08_29.1270 24 RTAALAR|KK 0.087 . LmxM.08_29.1270 25 TAALARK|KA 0.115 . LmxM.08_29.1270 26 AALARKK|AN 0.104 . LmxM.08_29.1270 50 ENSLASR|VV 0.150 . LmxM.08_29.1270 53 LASRVVR|KL 0.426 . LmxM.08_29.1270 54 ASRVVRK|LG 0.097 . LmxM.08_29.1270 61 LGAASVK|DG 0.072 . LmxM.08_29.1270 67 KDGLEAR|VD 0.077 . LmxM.08_29.1270 82 PAPTQPR|PN 0.112 . LmxM.08_29.1270 89 PNSDMMR|VM 0.120 . LmxM.08_29.1270 98 NTAEQER|VA 0.082 . LmxM.08_29.1270 119 LALHESK|EV 0.093 . LmxM.08_29.1270 123 ESKEVGR|IL 0.135 . LmxM.08_29.1270 132 DAAGAGK|KA 0.065 . LmxM.08_29.1270 133 AAGAGKK|AI 0.104 . LmxM.08_29.1270 136 AGKKAIR|TT 0.077 . LmxM.08_29.1270 143 TTLLEMR|KG 0.081 . LmxM.08_29.1270 144 TLLEMRK|GK 0.069 . LmxM.08_29.1270 146 LEMRKGK|KI 0.154 . LmxM.08_29.1270 147 EMRKGKK|IT 0.121 . LmxM.08_29.1270 162 NYESLNK|YA 0.062 . LmxM.08_29.1270 169 YAVDLCK|QA 0.082 . LmxM.08_29.1270 175 KQAEDGK|LD 0.060 . LmxM.08_29.1270 182 LDPVIGR|AD 0.092 . LmxM.08_29.1270 188 RADEILR|TI 0.069 . LmxM.08_29.1270 191 EILRTIR|VL 0.151 . LmxM.08_29.1270 195 TIRVLSR|RT 0.081 . LmxM.08_29.1270 196 IRVLSRR|TK 0.116 . LmxM.08_29.1270 198 VLSRRTK|NN 0.125 . LmxM.08_29.1270 211 GEPGVGK|TA 0.068 . LmxM.08_29.1270 224 IAQQVVR|GD 0.097 . LmxM.08_29.1270 235 DTLSGIR|IF 0.070 . LmxM.08_29.1270 249 ALIAGAK|YR 0.071 . LmxM.08_29.1270 251 IAGAKYR|GE 0.114 . LmxM.08_29.1270 257 RGEFEER|LK 0.071 . LmxM.08_29.1270 259 EFEERLK|AV 0.066 . LmxM.08_29.1270 266 AVLNEVK|ES 0.055 . LmxM.08_29.1270 287 LVLGAGK|SD 0.078 . LmxM.08_29.1270 299 DAANLLK|PL 0.062 . LmxM.08_29.1270 304 LKPLLAR|GE 0.082 . LmxM.08_29.1270 308 LARGELR|TI 0.118 . LmxM.08_29.1270 319 TTLEEYR|QY 0.075 . LmxM.08_29.1270 324 YRQYVEK|DA 0.100 . LmxM.08_29.1270 330 KDAAFER|RF 0.110 . LmxM.08_29.1270 331 DAAFERR|FM 0.196 . LmxM.08_29.1270 350 ECMSILR|GL 0.080 . LmxM.08_29.1270 353 SILRGLK|DR 0.115 . LmxM.08_29.1270 355 LRGLKDR|YE 0.131 . LmxM.08_29.1270 367 GVQITDK|AV 0.076 . LmxM.08_29.1270 378 AAQLAGR|YI 0.085 . LmxM.08_29.1270 383 GRYITNR|FL 0.120 . LmxM.08_29.1270 388 NRFLPDK|AI 0.074 . LmxM.08_29.1270 401 EACANVR|VT 0.080 . LmxM.08_29.1270 407 RVTLSSR|PA 0.082 . LmxM.08_29.1270 416 EIDALER|KK 0.076 . LmxM.08_29.1270 417 IDALERK|KR 0.072 . LmxM.08_29.1270 418 DALERKK|RQ 0.078 . LmxM.08_29.1270 419 ALERKKR|QL 0.763 *ProP* LmxM.08_29.1270 426 QLEIEEK|AL 0.061 . LmxM.08_29.1270 430 EEKALQR|DK 0.111 . LmxM.08_29.1270 432 KALQRDK|DP 0.073 . LmxM.08_29.1270 437 DKDPSVK|ER 0.058 . LmxM.08_29.1270 439 DPSVKER|LK 0.109 . LmxM.08_29.1270 441 SVKERLK|AV 0.076 . LmxM.08_29.1270 444 ERLKAVK|AE 0.066 . LmxM.08_29.1270 449 VKAEIQK|AE 0.067 . LmxM.08_29.1270 453 IQKAEEK|LG 0.053 . LmxM.08_29.1270 460 LGPLLAK|YE 0.064 . LmxM.08_29.1270 465 AKYEQER|GR 0.108 . LmxM.08_29.1270 467 YEQERGR|ID 0.097 . LmxM.08_29.1270 477 LQATQAK|LD 0.072 . LmxM.08_29.1270 481 QAKLDEK|KV 0.064 . LmxM.08_29.1270 482 AKLDEKK|VK 0.072 . LmxM.08_29.1270 484 LDEKKVK|LE 0.070 . LmxM.08_29.1270 487 KKVKLER|AE 0.075 . LmxM.08_29.1270 490 KLERAER|MR 0.204 . LmxM.08_29.1270 492 ERAERMR|DM 0.167 . LmxM.08_29.1270 501 ETAADLK|YN 0.057 . LmxM.08_29.1270 511 IPIIQDR|IR 0.102 . LmxM.08_29.1270 513 IIQDRIR|SL 0.138 . LmxM.08_29.1270 516 DRIRSLK|EE 0.149 . LmxM.08_29.1270 521 LKEEIEK|QK 0.067 . LmxM.08_29.1270 523 EEIEKQK|TT 0.067 . LmxM.08_29.1270 542 IATVVSR|WT 0.089 . LmxM.08_29.1270 550 TNIPVTK|LS 0.070 . LmxM.08_29.1270 556 KLSQTER|ER 0.086 . LmxM.08_29.1270 558 SQTERER|LL 0.075 . LmxM.08_29.1270 569 ADQLHLR|VK 0.106 . LmxM.08_29.1270 571 QLHLRVK|GQ 0.074 . LmxM.08_29.1270 579 QDEAVNR|VA 0.143 . LmxM.08_29.1270 586 VAEAILR|SR 0.080 . LmxM.08_29.1270 588 EAILRSR|AG 0.062 . LmxM.08_29.1270 593 SRAGLSR|SD 0.174 . LmxM.08_29.1270 596 GLSRSDR|PT 0.480 . LmxM.08_29.1270 611 GPTGVGK|TE 0.058 . LmxM.08_29.1270 616 GKTELSK|AV 0.078 . LmxM.08_29.1270 627 ELFDDAK|YM 0.064 . LmxM.08_29.1270 631 DAKYMVR|LD 0.072 . LmxM.08_29.1270 645 EQHSVAR|LI 0.129 . LmxM.08_29.1270 667 QLTEPVR|RR 0.064 . LmxM.08_29.1270 668 LTEPVRR|RA 0.138 . LmxM.08_29.1270 669 TEPVRRR|AY 0.186 . LmxM.08_29.1270 681 LLDEVEK|AH 0.061 . LmxM.08_29.1270 698 QVLDDGR|LT 0.082 . LmxM.08_29.1270 705 LTDSHGR|TV 0.093 . LmxM.08_29.1270 733 NMDTSPK|AY 0.074 . LmxM.08_29.1270 747 QVMGEVR|KF 0.080 . LmxM.08_29.1270 748 VMGEVRK|FF 0.110 . LmxM.08_29.1270 751 EVRKFFR|PE 0.090 . LmxM.08_29.1270 757 RPEFINR|LD 0.100 . LmxM.08_29.1270 765 DDIILFR|SL 0.192 . LmxM.08_29.1270 770 FRSLGSK|EM 0.072 . LmxM.08_29.1270 786 VEELNGR|LK 0.080 . LmxM.08_29.1270 788 ELNGRLK|DQ 0.068 . LmxM.08_29.1270 793 LKDQSIR|VS 0.083 . LmxM.08_29.1270 801 SLTEEAK|HY 0.058 . LmxM.08_29.1270 816 DADMGAR|PL 0.082 . LmxM.08_29.1270 819 MGARPLR|RW 0.250 . LmxM.08_29.1270 820 GARPLRR|WV 0.401 . LmxM.08_29.1270 824 LRRWVEK|NI 0.101 . LmxM.08_29.1270 832 ITTELSR|MI 0.092 . LmxM.08_29.1270 846 SPNSTVK|VT 0.070 . LmxM.08_29.1270 854 TLSSNHK|KL 0.071 . LmxM.08_29.1270 855 LSSNHKK|LS 0.160 . LmxM.08_29.1270 861 KLSFSVK|RT 0.083 . LmxM.08_29.1270 862 LSFSVKR|TA 0.300 . ____________________________^_________________

  • Fasta :-

    >LmxM.08_29.1270 ATGACGACGCAGCAGCCAGAATGGACGCAGGCGGCGTCGGACTTGATGGCTCGCACGGCG GCACTGGCCCGCAAGAAGGCAAACGGCTACCTCGACCCCGTGCACCTCGCCTACGTCATG TTTGAAGATGAAAACAGTCTTGCCTCCCGTGTAGTGCGCAAGCTCGGTGCCGCCTCGGTG AAGGACGGACTGGAGGCACGTGTCGACGCGATTCCCACGCAGATGCCTGCACCGACGCAG CCGCGGCCCAACTCGGACATGATGCGTGTAATGAATACGGCGGAGCAGGAGCGTGTTGCC CTCGGAGACACCCTCATGGCCGCTGATCACTTCCTCCTGGCCCTGCACGAGAGCAAGGAG GTGGGCAGAATCCTGGATGCTGCAGGGGCTGGCAAGAAGGCGATTCGCACCACGCTGCTC GAGATGCGCAAGGGGAAAAAGATAACCTCCGACTTCCAGGACGACAACTACGAGTCACTG AACAAGTACGCAGTCGATCTCTGCAAGCAGGCGGAGGACGGAAAGCTGGACCCGGTTATT GGTCGCGCCGACGAGATTCTGCGCACCATCCGCGTGCTGTCACGGCGCACCAAGAACAAC CCGGTGCTGATTGGGGAGCCTGGAGTGGGCAAGACCGCGATTGTGGAGGGCATTGCGCAA CAGGTGGTGCGAGGCGACGTGCCGGACACCCTTTCCGGCATTCGCATCTTCTCACTGGAC ATGGGTGCGCTGATCGCCGGTGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGGCC GTGCTGAATGAGGTGAAGGAAAGCAACAATACGATCATCCTCTTCATTGACGAGATCCAC CTCGTACTCGGCGCCGGCAAGTCCGACGGCGCGATGGACGCCGCGAATCTGCTGAAGCCG CTGCTGGCCCGTGGCGAGCTGCGCACGATCGGTGCCACAACGCTCGAGGAGTACCGCCAG TACGTGGAGAAGGACGCCGCTTTCGAGCGACGCTTCATGCCAGTGCAGGTGAATGAGCCG TCAGTCGAGGAGTGCATGAGCATCCTGCGTGGGCTGAAAGACCGCTACGAGCAGCACCAC GGTGTGCAGATCACGGACAAGGCTGTTGTGGTGGCGGCGCAGCTGGCTGGCCGCTACATT ACGAACCGCTTCCTGCCGGATAAGGCGATTGACCTGATTGATGAGGCGTGCGCCAACGTG CGTGTGACGCTGTCGTCGCGGCCGGCCGAGATCGACGCCCTCGAGCGCAAGAAGCGCCAG CTGGAGATCGAGGAGAAGGCGTTGCAGCGCGACAAGGATCCGTCGGTCAAGGAGCGGCTG AAAGCCGTGAAGGCGGAGATTCAGAAGGCGGAGGAGAAGCTTGGCCCGCTTCTTGCCAAG TACGAGCAGGAGCGTGGCCGTATCGACGAGCTGCAGGCAACACAGGCGAAGCTGGACGAG AAGAAGGTGAAGCTGGAGCGGGCGGAGCGGATGCGTGACATGGAGACGGCAGCAGACCTC AAATACAACGTCATCCCGATTATCCAGGACAGGATCCGATCCCTCAAGGAGGAGATCGAG AAGCAGAAGACGACGATGCTGCAGGGCACCGTGACCGAGACGGACATCGCCACTGTTGTA TCGCGCTGGACCAATATCCCGGTGACAAAGCTGAGCCAGACCGAGCGCGAGCGCCTGCTG CACCTGGCCGACCAACTGCATCTCCGTGTGAAGGGCCAGGATGAGGCCGTGAACCGTGTT GCGGAGGCCATTCTGCGCTCACGTGCCGGCCTGTCCCGCTCTGACCGGCCTACCGGCTCC TTCCTGTTTCTCGGCCCCACCGGCGTGGGCAAGACAGAGCTGTCCAAGGCCGTAGCCACA GAGCTCTTCGACGACGCCAAGTACATGGTGCGACTGGACATGAGCGAGTACATGGAGCAG CACTCTGTGGCGCGGCTGATCGGCGCTCCGCCAGGGTACGTCGGCCACGAAGAAGGTGGC CAGCTCACGGAGCCGGTGCGCCGTCGCGCATACACGGTGGTGCTGCTGGATGAGGTGGAG AAGGCGCACCCGAACGTCTTCAACGTACTGCTGCAGGTGCTCGACGACGGGCGGTTGACC GACTCCCACGGCCGCACCGTGAATTTCTGCAACACGATCATCATCATGACATCCAACTTG GGTGCGCAGTATCTACAGAATATGGACACCTCACCGAAGGCCTACGAAGTGGCACAGGCA CAGGTGATGGGCGAGGTAAGGAAGTTCTTTCGCCCGGAGTTCATCAACCGACTGGATGAC ATCATCCTCTTCCGCTCTTTGGGCTCGAAGGAGATGATGGGGATCATCGACCTCATCGTT GAGGAGCTGAATGGCCGCCTCAAGGATCAGTCCATCCGTGTCTCCCTCACCGAGGAGGCG AAGCACTACGTATTGGAGTCCGCCTTCGACGCGGATATGGGCGCTCGTCCGCTACGGCGC TGGGTTGAGAAGAACATCACAACAGAGCTCAGCCGCATGATCATCTCGCAAGAGCTGTCG CCAAACAGCACGGTGAAAGTGACTCTCAGCAGCAACCATAAAAAGCTATCCTTCTCGGTG AAGCGGACGGCGGGGTAG
  • Download Fasta

  • Fasta :-

    MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASV KDGLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKE VGRILDAAGAGKKAIRTTLLEMRKGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD MGALIAGAKYRGEFEERLKAVLNEVKESNNTIILFIDEIHLVLGAGKSDGAMDAANLLKP LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECMSILRGLKDRYEQHH GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ LEIEEKALQRDKDPSVKERLKAVKAEIQKAEEKLGPLLAKYEQERGRIDELQATQAKLDE KKVKLERAERMRDMETAADLKYNVIPIIQDRIRSLKEEIEKQKTTMLQGTVTETDIATVV SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVNRVAEAILRSRAGLSRSDRPTGS FLFLGPTGVGKTELSKAVATELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG QLTEPVRRRAYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL GAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGSKEMMGIIDLIV EELNGRLKDQSIRVSLTEEAKHYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS PNSTVKVTLSSNHKKLSFSVKRTAG

  • title: ATP binding site
  • coordinates: E206,P207,G208,V209,G210,K211,T212,A213,D277,T314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.08_29.1270514 SDRIRSLKEE0.996unspLmxM.08_29.1270514 SDRIRSLKEE0.996unspLmxM.08_29.1270514 SDRIRSLKEE0.996unspLmxM.08_29.1270592 SRAGLSRSDR0.992unspLmxM.08_29.1270731 SNMDTSPKAY0.993unspLmxM.08_29.1270795 SSIRVSLTEE0.992unspLmxM.08_29.1270859 SKLSFSVKRT0.997unspLmxM.08_29.127059 SLGAASVKDG0.998unspLmxM.08_29.1270435 SDKDPSVKER0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India